Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:27:29 (27595): wrapper (7.7.26015): starting
04:27:29 (27595): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 04:27:29] Arguments: --nthreads 8
[2026-03-15 04:27:29] Threads: 8
[2026-03-15 04:27:29] Checking for CVMFS
[2026-03-15 04:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 04:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 04:27:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 04:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 04:27:29] 2.11.0.0 8315 222076 91164 157300 0 50 3692527 4096000 917 130560 4 10872818 99.466 13073112 395 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-15 04:27:29] CVMFS is ok
[2026-03-15 04:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 04:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 04:27:29] Further information can be found at the LHC@home message board.
[2026-03-15 04:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 04:27:29] Checking for apptainer binary...
[2026-03-15 04:27:29] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-15 04:27:29] apptainer is not installed, using version from CVMFS
[2026-03-15 04:27:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 04:27:29] WARNING: Environment variable TMPDIR already has value [/tmp/job_11312174/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node223
[2026-03-15 04:27:29] apptainer works
[2026-03-15 04:27:30] Set ATHENA_PROC_NUMBER=8
[2026-03-15 04:27:30] Set ATHENA_CORE_NUMBER=8
[2026-03-15 04:27:30] Starting ATLAS job with PandaID=7047462230
[2026-03-15 04:27:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11312174/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 05:09:47]  *** The last 200 lines of the pilot log: ***
[2026-03-15 05:09:47] ]
[2026-03-15 05:09:47] 2026-03-15 04:09:09,041 | INFO     | transferring file log.48955010._047490.job.log.tgz.1 from /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/log.48955010._047490.job.log.tgz.1 to /tmp/j
[2026-03-15 05:09:47] 2026-03-15 04:09:09,042 | INFO     | executing command: /usr/bin/env mv /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/log.48955010._047490.job.log.tgz.1 /tmp/job_11312174/atlas/pilot/sl
[2026-03-15 05:09:47] 2026-03-15 04:09:09,049 | INFO     | adding to output.list: log.48955010._047490.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/22/log.48955010._047490.job.log.tg
[2026-03-15 05:09:47] 2026-03-15 04:09:09,050 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 05:09:47] 2026-03-15 04:09:09,050 | INFO     | summary of transferred files:
[2026-03-15 05:09:47] 2026-03-15 04:09:09,050 | INFO     |  -- lfn=log.48955010._047490.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 05:09:47] 2026-03-15 04:09:09,050 | INFO     | stage-out finished correctly
[2026-03-15 05:09:47] 2026-03-15 04:09:10,061 | INFO     | time since job start (2494s) is within the limit (345600.0s)
[2026-03-15 05:09:47] 2026-03-15 04:09:11,722 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 05:09:47] 2026-03-15 04:09:12,065 | INFO     | time since job start (2496s) is within the limit (345600.0s)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,642 | WARNING  | process 3794 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 05:09:47] 2026-03-15 04:09:12,642 | INFO     | using path: /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,642 | INFO     | using path: /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,643 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 05:09:47] 2026-03-15 04:09:12,643 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 05:09:47] 2026-03-15 04:09:12,643 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4466931 B
[2026-03-15 05:09:47] 2026-03-15 04:09:12,643 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16114 B
[2026-03-15 05:09:47] 2026-03-15 04:09:12,643 | INFO     | executing command: df -mP /tmp/job_11312174/atlas/pilot/slots/0
[2026-03-15 05:09:47] 2026-03-15 04:09:12,650 | INFO     | sufficient remaining disk space (225707032576 B)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,650 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,650 | INFO     | size of work directory /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230: 4758035 B (within 5033164800 B limit)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,650 | INFO     | pfn file=/tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/HITS.48955010._047490.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,650 | INFO     | total size of present files: 0 B (workdir size: 4758035 B)
[2026-03-15 05:09:47] 2026-03-15 04:09:12,650 | INFO     | output file size check: skipping output file /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/HITS.48955010._047490.pool.root.1 since it does not exist
[2026-03-15 05:09:47] 2026-03-15 04:09:12,741 | INFO     | number of running child processes to parent process 3794: 1
[2026-03-15 05:09:47] 2026-03-15 04:09:12,741 | INFO     | maximum number of monitored processes: 6
[2026-03-15 05:09:47] 2026-03-15 04:09:13,188 | INFO     | PID=31404 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 05:09:47] 2026-03-15 04:09:13,188 | INFO     | .. there are 2 such processes running
[2026-03-15 05:09:47] 2026-03-15 04:09:13,192 | INFO     | job 7047462230 has state=finished
[2026-03-15 05:09:47] 2026-03-15 04:09:13,192 | INFO     | preparing for final server update for job 7047462230 in state='finished'
[2026-03-15 05:09:47] 2026-03-15 04:09:13,639 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,639 | INFO     | reading metadata from: /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/jobReport.json
[2026-03-15 05:09:47] 2026-03-15 04:09:13,640 | INFO     | added worker_node to metadata from /tmp/job_11312174/atlas/pilot/slots/0/workernode_map.json
[2026-03-15 05:09:47] 2026-03-15 04:09:13,640 | INFO     | this job has now completed (state=finished)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,640 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,640 | INFO     | log transfer has been attempted: DONE
[2026-03-15 05:09:47] 2026-03-15 04:09:13,640 | INFO     | job 7047462230 has finished - writing final server update
[2026-03-15 05:09:47] 2026-03-15 04:09:13,640 | INFO     | total number of processed events: 400 (read)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,658 | INFO     | using path: /tmp/job_11312174/atlas/pilot/slots/0/PanDA_Pilot-7047462230/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,658 | INFO     | extracted standard info from prmon json
[2026-03-15 05:09:47] 2026-03-15 04:09:13,658 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 05:09:47] 2026-03-15 04:09:13,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 05:09:47] 2026-03-15 04:09:13,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 05:09:47] 2026-03-15 04:09:13,658 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | fitting pss+swap vs Time
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | sum of square deviations: 12176972.5
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | sum of deviations: -1584167438.0
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | mean x: 1773546583.5
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | mean y: 2816911.294117647
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | intersect: 230732971500.77423
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | chi2: 0.017214511023112382
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | current memory leak: -130.10 B/s (using 34 data points, chi2=0.02)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | could have reported an average CPU frequency of 2479 MHz (5 samples)
[2026-03-15 05:09:47] 2026-03-15 04:09:13,659 | INFO     | ..............................
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . Timing measurements:
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . get job = 0 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . initial setup = 2 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . payload setup = 2 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . stage-in = 0 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . payload execution = 2475 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . stage-out = 0 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | . log creation = 0 s
[2026-03-15 05:09:47] 2026-03-15 04:09:13,660 | INFO     | ..............................
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | 
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | job summary report
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | --------------------------------------------------
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | PanDA job id: 7047462230
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | task id: 48955010
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | errors: (none)
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | pilot state: finished 
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | transexitcode: 0
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | exeerrorcode: 0
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | exeerrordiag: 
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | exitcode: 0
[2026-03-15 05:09:47] 2026-03-15 04:09:14,113 | INFO     | exitmsg: OK
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | cpuconsumptiontime: 18186 s
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | nevents: 400
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | neventsw: 0
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | pid: 3794
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | pgrp: 3794
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | corecount: 8
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | event service: False
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | sizes: {0: 2280307, 10: 2280307, 2481: 2305613, 2482: 2314641, 2484: 2314697, 2486: 2314951}
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | --------------------------------------------------
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | 
[2026-03-15 05:09:47] 2026-03-15 04:09:14,114 | INFO     | executing command: ls -lF /tmp/job_11312174/atlas/pilot/slots/0
[2026-03-15 05:09:47] 2026-03-15 04:09:14,122 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,122 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | job 7047462230 has completed (purged errors)
[2026-03-15 05:09:47] 2026-03-15 04:09:14,123 | INFO     | overall cleanup function is called
[2026-03-15 05:09:47] 2026-03-15 04:09:15,129 | INFO     | --- collectZombieJob: --- 10, [3794]
[2026-03-15 05:09:47] 2026-03-15 04:09:15,129 | INFO     | zombie collector waiting for pid 3794
[2026-03-15 05:09:47] 2026-03-15 04:09:15,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 05:09:47] 2026-03-15 04:09:15,129 | INFO     | collected zombie processes
[2026-03-15 05:09:47] 2026-03-15 04:09:15,129 | INFO     | will attempt to kill all subprocesses of pid=3794
[2026-03-15 05:09:47] 2026-03-15 04:09:15,221 | INFO     | process IDs to be killed: [3794] (in reverse order)
[2026-03-15 05:09:47] 2026-03-15 04:09:15,252 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 05:09:47] 2026-03-15 04:09:15,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 05:09:47] 2026-03-15 04:09:15,256 | INFO     | did not find any defunct processes belonging to 3794
[2026-03-15 05:09:47] 2026-03-15 04:09:15,258 | INFO     | did not find any defunct processes belonging to 3794
[2026-03-15 05:09:47] 2026-03-15 04:09:15,259 | INFO     | ready for new job
[2026-03-15 05:09:47] 2026-03-15 04:09:15,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 05:09:47] 2026-03-15 04:09:15,259 | INFO     | **************************************
[2026-03-15 05:09:47] 2026-03-15 04:09:15,259 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 05:09:47] 2026-03-15 04:09:15,259 | INFO     | **************************************
[2026-03-15 05:09:47] 2026-03-15 04:09:15,259 | INFO     | 
[2026-03-15 05:09:47] 2026-03-15 04:09:15,273 | INFO     | architecture information:
[2026-03-15 05:09:47] 2026-03-15 04:09:15,274 | INFO     | executing command: cat /etc/os-release
[2026-03-15 05:09:47] 2026-03-15 04:09:15,281 | INFO     | cat /etc/os-release:
[2026-03-15 05:09:47] NAME="CentOS Linux"
[2026-03-15 05:09:47] VERSION="7 (Core)"
[2026-03-15 05:09:47] ID="centos"
[2026-03-15 05:09:47] ID_LIKE="rhel fedora"
[2026-03-15 05:09:47] VERSION_ID="7"
[2026-03-15 05:09:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 05:09:47] ANSI_COLOR="0;31"
[2026-03-15 05:09:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 05:09:47] HOME_URL="https://www.centos.org/"
[2026-03-15 05:09:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 05:09:47] 
[2026-03-15 05:09:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 05:09:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 05:09:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 05:09:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 05:09:47] 
[2026-03-15 05:09:47] 2026-03-15 04:09:15,281 | INFO     | **************************************
[2026-03-15 05:09:47] 2026-03-15 04:09:15,784 | INFO     | executing command: df -mP /tmp/job_11312174/atlas/pilot/slots/0
[2026-03-15 05:09:47] 2026-03-15 04:09:15,790 | INFO     | sufficient remaining disk space (225711226880 B)
[2026-03-15 05:09:47] 2026-03-15 04:09:15,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 05:09:47] 2026-03-15 04:09:15,790 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 05:09:47] 2026-03-15 04:09:15,790 | INFO     | update_server=False
[2026-03-15 05:09:47] 2026-03-15 04:09:15,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 05:09:47] 2026-03-15 04:09:16,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 05:09:47] 2026-03-15 04:09:16,249 | INFO     | aborting loop
[2026-03-15 05:09:47] 2026-03-15 04:09:16,422 | INFO     | all payload control threads have been joined
[2026-03-15 05:09:47] 2026-03-15 04:09:16,778 | INFO     | all data control threads have been joined
[2026-03-15 05:09:47] 2026-03-15 04:09:16,795 | INFO     | [job] retrieve thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:16,906 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,063 | INFO     | all job control threads have been joined
[2026-03-15 05:09:47] 2026-03-15 04:09:17,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 05:09:47] 2026-03-15 04:09:17,136 | INFO     | [payload] failed_post thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,138 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,217 | INFO     | [data] copytool_in thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,253 | INFO     | [job] job monitor thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,427 | INFO     | [payload] control thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,692 | INFO     | [payload] validate_post thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:17,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 05:09:47] 2026-03-15 04:09:17,783 | INFO     | [data] control thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:18,068 | INFO     | [job] control thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:18,163 | INFO     | [job] validate thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:18,258 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:18,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 05:09:47] 2026-03-15 04:09:19,114 | INFO     | [data] copytool_out thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:19,724 | INFO     | [job] queue monitor thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:21,781 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:26,695 | INFO     | job.realtimelogging is not enabled
[2026-03-15 05:09:47] 2026-03-15 04:09:27,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 05:09:47] 2026-03-15 04:09:40,547 | INFO     | [monitor] cgroup control has ended
[2026-03-15 05:09:47] 2026-03-15 04:09:42,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058988288)>']
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | INFO     | PID=31404 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | INFO     | .. there are 2 such processes running
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 05:09:47] 2026-03-15 04:09:45,366 | INFO     | [monitor] control thread has ended
[2026-03-15 05:09:47] 2026-03-15 04:09:47,365 | INFO     | all workflow threads have been joined
[2026-03-15 05:09:47] 2026-03-15 04:09:47,365 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 05:09:47] 2026-03-15 04:09:47,365 | INFO     | traces error code: 0
[2026-03-15 05:09:47] 2026-03-15 04:09:47,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 05:09:47] 2026-03-15 04:09:47,417 [wrapper] ==== pilot stdout END ====
[2026-03-15 05:09:47] 2026-03-15 04:09:47,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 05:09:47] 2026-03-15 04:09:47,420 [wrapper] pilotpid: 31404
[2026-03-15 05:09:47] 2026-03-15 04:09:47,421 [wrapper] Pilot exit status: 0
[2026-03-15 05:09:47] 2026-03-15 04:09:47,425 [wrapper] pandaids: 7047462230
[2026-03-15 05:09:47] 2026-03-15 04:09:47,446 [wrapper] cleanup supervisor_pilot 27807 31405
[2026-03-15 05:09:47] 2026-03-15 04:09:47,447 [wrapper] Test setup, not cleaning
[2026-03-15 05:09:47] 2026-03-15 04:09:47,448 [wrapper] apfmon messages muted
[2026-03-15 05:09:47] 2026-03-15 04:09:47,449 [wrapper] ==== wrapper stdout END ====
[2026-03-15 05:09:47] 2026-03-15 04:09:47,450 [wrapper] ==== wrapper stderr END ====
[2026-03-15 05:09:47]  *** Error codes and diagnostics ***
[2026-03-15 05:09:47]     "exeErrorCode": 0,
[2026-03-15 05:09:47]     "exeErrorDiag": "",
[2026-03-15 05:09:47]     "pilotErrorCode": 0,
[2026-03-15 05:09:47]     "pilotErrorDiag": "",
[2026-03-15 05:09:47]  *** Listing of results directory ***
[2026-03-15 05:09:47] total 609700
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 05:09:47] -rwx------ 1 mf493845 unix-user     36322 Mar 14 17:41 runpilot2-wrapper.sh
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      5111 Mar 14 17:43 queuedata.json
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user       100 Mar 15 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 05:09:47] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 15 02:36 run_atlas
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user       105 Mar 15 02:36 job.xml
[2026-03-15 05:09:47] drwxrwx--x 2 mf493845 unix-user       100 Mar 15 04:27 shared
[2026-03-15 05:09:47] -rw-r--r-- 2 mf493845 unix-user    597532 Mar 15 04:27 input.tar.gz
[2026-03-15 05:09:47] -rw-r--r-- 2 mf493845 unix-user 437573657 Mar 15 04:27 EVNT.46701403._001974.pool.root.1
[2026-03-15 05:09:47] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 15 04:27 start_atlas.sh
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      6391 Mar 15 04:27 init_data.xml
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user         0 Mar 15 04:27 boinc_setup_complete
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      8192 Mar 15 04:27 boinc_mmap_file
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user         0 Mar 15 04:27 boinc_lockfile
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      2564 Mar 15 04:27 pandaJob.out
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user   1006481 Mar 15 04:27 agis_schedconf.cvmfs.json
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user   1511579 Mar 15 04:27 agis_ddmendpoints.agis.ALL.json
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user       415 Mar 15 04:27 workernode_map.json
[2026-03-15 05:09:47] drwx------ 5 mf493845 unix-user       440 Mar 15 04:27 pilot3
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user 181388540 Mar 15 05:08 HITS.48955010._047490.pool.root.1
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      1016 Mar 15 05:09 memory_monitor_summary.json
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user        95 Mar 15 05:09 pilot_heartbeat.json
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user    326920 Mar 15 05:09 log.48955010._047490.job.log.tgz.1
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      6319 Mar 15 05:09 heartbeat.json
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      4903 Mar 15 05:09 pilotlog.txt
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user    404459 Mar 15 05:09 log.48955010._047490.job.log.1
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user       357 Mar 15 05:09 output.list
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user       620 Mar 15 05:09 runtime_log
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user    747520 Mar 15 05:09 result.tar.gz
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user      9219 Mar 15 05:09 runtime_log.err
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user       643 Mar 15 05:09 N1rKDmvEhL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5atLDmm57Urn.diag
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user     23284 Mar 15 05:09 stderr.txt
[2026-03-15 05:09:47] HITS file was successfully produced:
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user 181388540 Mar 15 05:08 shared/HITS.pool.root.1
[2026-03-15 05:09:47]  *** Contents of shared directory: ***
[2026-03-15 05:09:47] total 605792
[2026-03-15 05:09:47] -rw-r--r-- 2 mf493845 unix-user    597532 Mar 15 04:27 input.tar.gz
[2026-03-15 05:09:47] -rw-r--r-- 2 mf493845 unix-user 437573657 Mar 15 04:27 ATLAS.root_0
[2026-03-15 05:09:47] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 15 04:27 start_atlas.sh
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user 181388540 Mar 15 05:08 HITS.pool.root.1
[2026-03-15 05:09:47] -rw------- 1 mf493845 unix-user    747520 Mar 15 05:09 result.tar.gz
05:09:49 (27595): run_atlas exited; CPU time 18217.928851
05:09:49 (27595): called boinc_finish(0)

</stderr_txt>
]]>

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