Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:57:50 (1060357): wrapper (7.7.26015): starting
16:57:50 (1060357): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 16:57:50] Arguments: --nthreads 4
[2026-03-15 16:57:50] Threads: 4
[2026-03-15 16:57:50] Checking for CVMFS
[2026-03-15 16:57:50] No cvmfs_config command found, will try listing directly
[2026-03-15 16:57:50] CVMFS is ok
[2026-03-15 16:57:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:57:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:57:50] Further information can be found at the LHC@home message board.
[2026-03-15 16:57:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:57:50] Checking for apptainer binary...
[2026-03-15 16:57:50] which: no apptainer in ((null))
[2026-03-15 16:57:50] apptainer is not installed, using version from CVMFS
[2026-03-15 16:57:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:57:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-15 16:57:51] apptainer works
[2026-03-15 16:57:51] Set ATHENA_PROC_NUMBER=4
[2026-03-15 16:57:51] Set ATHENA_CORE_NUMBER=4
[2026-03-15 16:57:51] Starting ATLAS job with PandaID=7055034246
[2026-03-15 16:57:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:39:20]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:39:20]  protocol_id=None
[2026-03-15 18:39:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 18:39:20]  replicas=None
[2026-03-15 18:39:20]  scope=mc23_13p6TeV
[2026-03-15 18:39:20]  status=None
[2026-03-15 18:39:20]  status_code=0
[2026-03-15 18:39:20]  storage_token=
[2026-03-15 18:39:20]  surl=/var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7055034246/log.48967011._014683.job.log.tgz.1
[2026-03-15 18:39:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/b3/log.48967011._014683.job.log.tgz.1
[2026-03-15 18:39:20]  workdir=None
[2026-03-15 18:39:20] ]
[2026-03-15 18:39:20] 2026-03-15 17:38:41,286 | INFO     | transferring file log.48967011._014683.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7055034246/log.48967011._014683.job.log.tgz.1 to /var/lib/
[2026-03-15 18:39:20] 2026-03-15 17:38:41,286 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7055034246/log.48967011._014683.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/0/
[2026-03-15 18:39:20] 2026-03-15 17:38:41,303 | INFO     | adding to output.list: log.48967011._014683.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/b3/log.48967011._014683.job.log.tg
[2026-03-15 18:39:20] 2026-03-15 17:38:41,303 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 18:39:20] 2026-03-15 17:38:41,303 | INFO     | summary of transferred files:
[2026-03-15 18:39:20] 2026-03-15 17:38:41,303 | INFO     |  -- lfn=log.48967011._014683.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 18:39:20] 2026-03-15 17:38:41,303 | INFO     | stage-out finished correctly
[2026-03-15 18:39:20] 2026-03-15 17:38:41,452 | INFO     | time since job start (6038s) is within the limit (345600.0s)
[2026-03-15 18:39:20] 2026-03-15 17:38:43,457 | INFO     | time since job start (6040s) is within the limit (345600.0s)
[2026-03-15 18:39:20] 2026-03-15 17:38:43,688 | WARNING  | process 1078248 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 18:39:20] 2026-03-15 17:38:43,689 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7055034246/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:39:20] 2026-03-15 17:38:44,182 | INFO     | number of running child processes to parent process 1078248: 1
[2026-03-15 18:39:20] 2026-03-15 17:38:44,182 | INFO     | maximum number of monitored processes: 6
[2026-03-15 18:39:20] 2026-03-15 17:38:44,198 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 18:39:20] 2026-03-15 17:38:45,462 | INFO     | time since job start (6042s) is within the limit (345600.0s)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,509 | INFO     | job 7055034246 has state=finished
[2026-03-15 18:39:20] 2026-03-15 17:38:46,510 | INFO     | preparing for final server update for job 7055034246 in state='finished'
[2026-03-15 18:39:20] 2026-03-15 17:38:46,510 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7055034246/jobReport.json
[2026-03-15 18:39:20] 2026-03-15 17:38:46,512 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/0/workernode_map.json
[2026-03-15 18:39:20] 2026-03-15 17:38:46,512 | INFO     | this job has now completed (state=finished)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,512 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,512 | INFO     | log transfer has been attempted: DONE
[2026-03-15 18:39:20] 2026-03-15 17:38:46,512 | INFO     | job 7055034246 has finished - writing final server update
[2026-03-15 18:39:20] 2026-03-15 17:38:46,513 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_935654/.job.ad'
[2026-03-15 18:39:20] 2026-03-15 17:38:46,513 | INFO     | total number of processed events: 400 (read)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,536 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7055034246/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,537 | INFO     | extracted standard info from prmon json
[2026-03-15 18:39:20] 2026-03-15 17:38:46,537 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:39:20] 2026-03-15 17:38:46,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:39:20] 2026-03-15 17:38:46,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:39:20] 2026-03-15 17:38:46,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:39:20] 2026-03-15 17:38:46,539 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:39:20] 2026-03-15 17:38:46,539 | INFO     | sum of square deviations: 241429643.0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,539 | INFO     | sum of deviations: 1228650288.0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,539 | INFO     | mean x: 1773593384.5
[2026-03-15 18:39:20] 2026-03-15 17:38:46,539 | INFO     | mean y: 2331207.913043478
[2026-03-15 18:39:20] 2026-03-15 17:38:46,539 | INFO     | intersect: -9023594505.197586
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | chi2: 0.00044316542813551844
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | current memory leak: 5.09 B/s (using 92 data points, chi2=0.00)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | could have reported an average CPU frequency of 3594 MHz (7 samples)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | ..............................
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . Timing measurements:
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . get job = 0 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . initial setup = 5 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . payload setup = 5 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . stage-in = 0 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . payload execution = 6016 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . stage-out = 0 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | . log creation = 0 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,540 | INFO     | ..............................
[2026-03-15 18:39:20] 2026-03-15 17:38:46,587 | INFO     | 
[2026-03-15 18:39:20] 2026-03-15 17:38:46,587 | INFO     | job summary report
[2026-03-15 18:39:20] 2026-03-15 17:38:46,587 | INFO     | --------------------------------------------------
[2026-03-15 18:39:20] 2026-03-15 17:38:46,587 | INFO     | PanDA job id: 7055034246
[2026-03-15 18:39:20] 2026-03-15 17:38:46,587 | INFO     | task id: 48967011
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | errors: (none)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | pilot state: finished 
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | transexitcode: 0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | exeerrorcode: 0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | exeerrordiag: 
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | exitcode: 0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | exitmsg: OK
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | cpuconsumptiontime: 23300 s
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | nevents: 400
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | neventsw: 0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | pid: 1078248
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | pgrp: 1078248
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | corecount: 4
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | event service: False
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | sizes: {0: 2280255, 11: 2280255, 6024: 2307045, 6026: 2316067, 6029: 2316123, 6031: 2316317}
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | --------------------------------------------------
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | 
[2026-03-15 18:39:20] 2026-03-15 17:38:46,588 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/0
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | job 7055034246 has completed (purged errors)
[2026-03-15 18:39:20] 2026-03-15 17:38:46,609 | INFO     | overall cleanup function is called
[2026-03-15 18:39:20] 2026-03-15 17:38:47,130 | INFO     | PID=1064942 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 18:39:20] 2026-03-15 17:38:47,130 | INFO     | .. there are 43 such processes running
[2026-03-15 18:39:20] 2026-03-15 17:38:47,618 | INFO     | --- collectZombieJob: --- 10, [1078248]
[2026-03-15 18:39:20] 2026-03-15 17:38:47,618 | INFO     | zombie collector waiting for pid 1078248
[2026-03-15 18:39:20] 2026-03-15 17:38:47,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:39:20] 2026-03-15 17:38:47,618 | INFO     | collected zombie processes
[2026-03-15 18:39:20] 2026-03-15 17:38:47,618 | INFO     | will attempt to kill all subprocesses of pid=1078248
[2026-03-15 18:39:20] 2026-03-15 17:38:48,063 | INFO     | process IDs to be killed: [1078248] (in reverse order)
[2026-03-15 18:39:20] 2026-03-15 17:38:48,281 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:39:20] 2026-03-15 17:38:48,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:39:20] 2026-03-15 17:38:48,310 | INFO     | did not find any defunct processes belonging to 1078248
[2026-03-15 18:39:20] 2026-03-15 17:38:48,338 | INFO     | did not find any defunct processes belonging to 1078248
[2026-03-15 18:39:20] 2026-03-15 17:38:48,339 | INFO     | ready for new job
[2026-03-15 18:39:20] 2026-03-15 17:38:48,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:39:20] 2026-03-15 17:38:48,340 | INFO     | **************************************
[2026-03-15 18:39:20] 2026-03-15 17:38:48,340 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:39:20] 2026-03-15 17:38:48,340 | INFO     | **************************************
[2026-03-15 18:39:20] 2026-03-15 17:38:48,340 | INFO     | 
[2026-03-15 18:39:20] 2026-03-15 17:38:48,345 | INFO     | architecture information:
[2026-03-15 18:39:20] 2026-03-15 17:38:48,345 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:39:20] 2026-03-15 17:38:48,359 | INFO     | cat /etc/os-release:
[2026-03-15 18:39:20] NAME="CentOS Linux"
[2026-03-15 18:39:20] VERSION="7 (Core)"
[2026-03-15 18:39:20] ID="centos"
[2026-03-15 18:39:20] ID_LIKE="rhel fedora"
[2026-03-15 18:39:20] VERSION_ID="7"
[2026-03-15 18:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:39:20] ANSI_COLOR="0;31"
[2026-03-15 18:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:39:20] HOME_URL="https://www.centos.org/"
[2026-03-15 18:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:39:20] 
[2026-03-15 18:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:39:20] 
[2026-03-15 18:39:20] 2026-03-15 17:38:48,359 | INFO     | **************************************
[2026-03-15 18:39:20] 2026-03-15 17:38:48,861 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/0
[2026-03-15 18:39:20] 2026-03-15 17:38:48,876 | INFO     | sufficient remaining disk space (151033741312 B)
[2026-03-15 18:39:20] 2026-03-15 17:38:48,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:39:20] 2026-03-15 17:38:48,876 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:39:20] 2026-03-15 17:38:48,876 | INFO     | update_server=False
[2026-03-15 18:39:20] 2026-03-15 17:38:48,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:39:20] 2026-03-15 17:38:49,175 | INFO     | all data control threads have been joined
[2026-03-15 18:39:20] 2026-03-15 17:38:49,192 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 18:39:20] 2026-03-15 17:38:49,192 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 18:39:20] 2026-03-15 17:38:49,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:39:20] 2026-03-15 17:38:49,192 | INFO     | will abort loop
[2026-03-15 18:39:20] 2026-03-15 17:38:49,336 | INFO     | all job control threads have been joined
[2026-03-15 18:39:20] 2026-03-15 17:38:49,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:39:20] 2026-03-15 17:38:49,881 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:50,012 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:50,148 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:50,180 | INFO     | [data] control thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:50,197 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:50,238 | INFO     | all payload control threads have been joined
[2026-03-15 18:39:20] 2026-03-15 17:38:50,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:39:20] 2026-03-15 17:38:50,248 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:50,341 | INFO     | [job] control thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,002 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,142 | INFO     | [job] validate thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,164 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,243 | INFO     | [payload] control thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,318 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,367 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,372 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:51,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:39:20] 2026-03-15 17:38:52,602 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:38:54,252 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:39:20] 2026-03-15 17:39:13,092 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:39:20] 2026-03-15 17:39:14,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22489671542592)>', '<ExcThread(monitor, started 22489435752192)>']
[2026-03-15 18:39:20] 2026-03-15 17:39:19,699 | INFO     | all workflow threads have been joined
[2026-03-15 18:39:20] 2026-03-15 17:39:19,699 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:39:20] 2026-03-15 17:39:19,699 | INFO     | traces error code: 0
[2026-03-15 18:39:20] 2026-03-15 17:39:19,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:39:20] 2026-03-15 17:39:19,790 | INFO     | PID=1064942 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:39:20] 2026-03-15 17:39:19,790 | INFO     | .. there are 43 such processes running
[2026-03-15 18:39:20] 2026-03-15 17:39:19,790 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:39:20] 2026-03-15 17:39:19,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:39:20] 2026-03-15 17:39:19,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:39:20] 2026-03-15 17:39:19,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:39:20] 2026-03-15 17:39:19,791 | INFO     | [monitor] control thread has ended
[2026-03-15 18:39:20] 2026-03-15 17:39:19,924 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:39:20] 2026-03-15 17:39:19,927 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:39:20] 2026-03-15 17:39:19,929 [wrapper] pilotpid: 1064942
[2026-03-15 18:39:20] 2026-03-15 17:39:19,932 [wrapper] Pilot exit status: 0
[2026-03-15 18:39:20] 2026-03-15 17:39:19,940 [wrapper] pandaids: 7055034246
[2026-03-15 18:39:20] 2026-03-15 17:39:20,077 [wrapper] cleanup supervisor_pilot 1923188 1064943
[2026-03-15 18:39:20] 2026-03-15 17:39:20,081 [wrapper] Test setup, not cleaning
[2026-03-15 18:39:20] 2026-03-15 17:39:20,083 [wrapper] apfmon messages muted
[2026-03-15 18:39:20] 2026-03-15 17:39:20,085 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:39:20] 2026-03-15 17:39:20,087 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:39:20]  *** Error codes and diagnostics ***
[2026-03-15 18:39:20]     "exeErrorCode": 0,
[2026-03-15 18:39:20]     "exeErrorDiag": "",
[2026-03-15 18:39:20]     "pilotErrorCode": 0,
[2026-03-15 18:39:20]     "pilotErrorDiag": "",
[2026-03-15 18:39:20]  *** Listing of results directory ***
[2026-03-15 18:39:20] total 421404
[2026-03-15 18:39:20] -rwx------. 1 boinc boinc     36322 Mar 14 19:23 runpilot2-wrapper.sh
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc      5111 Mar 14 19:26 queuedata.json
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc    585013 Mar 14 19:26 pilot3.tar.gz
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:39:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:57 run_atlas
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:57 job.xml
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc      6709 Mar 15 16:57 init_data.xml
[2026-03-15 18:39:20] -rw-r--r--. 2 boinc boinc 221270431 Mar 15 16:57 EVNT.48967008._000565.pool.root.1
[2026-03-15 18:39:20] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:57 start_atlas.sh
[2026-03-15 18:39:20] drwxrwx--x. 2 boinc boinc      4096 Mar 15 16:57 shared
[2026-03-15 18:39:20] -rw-r--r--. 2 boinc boinc    597528 Mar 15 16:57 input.tar.gz
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:57 boinc_lockfile
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc      2564 Mar 15 16:57 pandaJob.out
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc   1006473 Mar 15 16:57 agis_schedconf.cvmfs.json
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc   1511579 Mar 15 16:57 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc       445 Mar 15 16:58 workernode_map.json
[2026-03-15 18:39:20] drwx------. 5 boinc boinc      4096 Mar 15 16:58 pilot3
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc       529 Mar 15 18:38 boinc_task_state.xml
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc 203994526 Mar 15 18:38 HITS.48967011._014683.pool.root.1
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc      1033 Mar 15 18:38 memory_monitor_summary.json
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc    284582 Mar 15 18:38 log.48967011._014683.job.log.tgz.1
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc      6357 Mar 15 18:38 heartbeat.json
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc      8192 Mar 15 18:39 boinc_mmap_file
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc        27 Mar 15 18:39 wrapper_checkpoint.txt
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc       823 Mar 15 18:39 pilotlog.txt
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc        95 Mar 15 18:39 pilot_heartbeat.json
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc    870850 Mar 15 18:39 log.48967011._014683.job.log.1
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc       357 Mar 15 18:39 output.list
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc       620 Mar 15 18:39 runtime_log
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc   1177600 Mar 15 18:39 result.tar.gz
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc      9221 Mar 15 18:39 runtime_log.err
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc       662 Mar 15 18:39 I3BNDmJpiL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2HrLDmh8oihm.diag
[2026-03-15 18:39:20] -rw-r--r--. 1 boinc boinc     21775 Mar 15 18:39 stderr.txt
[2026-03-15 18:39:20] HITS file was successfully produced:
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc 203994526 Mar 15 18:38 shared/HITS.pool.root.1
[2026-03-15 18:39:20]  *** Contents of shared directory: ***
[2026-03-15 18:39:20] total 417064
[2026-03-15 18:39:20] -rw-r--r--. 2 boinc boinc 221270431 Mar 15 16:57 ATLAS.root_0
[2026-03-15 18:39:20] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:57 start_atlas.sh
[2026-03-15 18:39:20] -rw-r--r--. 2 boinc boinc    597528 Mar 15 16:57 input.tar.gz
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc 203994526 Mar 15 18:38 HITS.pool.root.1
[2026-03-15 18:39:20] -rw-------. 1 boinc boinc   1177600 Mar 15 18:39 result.tar.gz
18:39:21 (1060357): run_atlas exited; CPU time 23590.794041
18:39:21 (1060357): called boinc_finish(0)

</stderr_txt>
]]>

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