Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:58:52 (1054482): wrapper (7.7.26015): starting
08:58:52 (1054482): wrapper: running run_atlas (--nthreads 3)
[2026-03-15 08:58:52] Arguments: --nthreads 3
[2026-03-15 08:58:52] Threads: 3
[2026-03-15 08:58:52] Checking for CVMFS
[2026-03-15 08:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 08:58:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 08:58:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 08:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 08:58:53] 2.9.2.0 5444 6625 83896 157306 2 50 32916895 36864001 0 130560 0 2958735 99.984 250235 15789 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 08:58:53] CVMFS is ok
[2026-03-15 08:58:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 08:58:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 08:58:53] Further information can be found at the LHC@home message board.
[2026-03-15 08:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 08:58:53] Checking for apptainer binary...
[2026-03-15 08:58:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 08:58:53] Running /usr/bin/apptainer --version
[2026-03-15 08:58:53] apptainer version 1.4.1-1.1
[2026-03-15 08:58:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 08:58:53] magicA161a
[2026-03-15 08:58:53] apptainer works
[2026-03-15 08:58:53] Set ATHENA_PROC_NUMBER=3
[2026-03-15 08:58:53] Set ATHENA_CORE_NUMBER=3
[2026-03-15 08:58:53] Starting ATLAS job with PandaID=7054978788
[2026-03-15 08:58:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 10:36:16]  *** The last 200 lines of the pilot log: ***
[2026-03-15 10:36:16] 2026-03-15 09:35:23,910 | INFO     | [payload] control thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:23,961 | INFO     | [data] control thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 10:36:16] 2026-03-15 09:35:24,328 | INFO     | [payload] failed_post thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,456 | INFO     | [job] control thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,472 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,586 | INFO     | [job] validate thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,635 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,690 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,820 | INFO     | [data] copytool_in thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:24,896 | INFO     | [payload] validate_post thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:25,528 | INFO     | [data] copytool_out thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:28,054 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:32,966 | INFO     | job.realtimelogging is not enabled
[2026-03-15 10:36:16] 2026-03-15 09:35:33,971 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 10:36:16] 2026-03-15 09:35:52,490 | INFO     | PID=1058535 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 10:36:16] 2026-03-15 09:35:52,490 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 10:36:16] 2026-03-15 09:35:52,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 10:36:16] 2026-03-15 09:35:52,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 10:36:16] 2026-03-15 09:36:11,113 | INFO     | [monitor] cgroup control has ended
[2026-03-15 10:36:16] 2026-03-15 09:36:11,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594816898880)>', '<ExcThread(monitor, started 140594319968000)>']
[2026-03-15 10:36:16] 2026-03-15 09:36:12,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 10:36:16] 2026-03-15 09:36:12,596 | INFO     | [monitor] control thread has ended
[2026-03-15 10:36:16] 2026-03-15 09:36:16,624 | INFO     | all workflow threads have been joined
[2026-03-15 10:36:16] 2026-03-15 09:36:16,625 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 10:36:16] 2026-03-15 09:36:16,626 | INFO     | traces error code: 0
[2026-03-15 10:36:16] 2026-03-15 09:36:16,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 10:36:16] 2026-03-15 09:36:16,674 [wrapper] ==== pilot stdout END ====
[2026-03-15 10:36:16] 2026-03-15 09:36:16,677 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 10:36:16] 2026-03-15 09:36:16,679 [wrapper] pilotpid: 1058535
[2026-03-15 10:36:16] 2026-03-15 09:36:16,682 [wrapper] Pilot exit status: 0
[2026-03-15 10:36:16] 2026-03-15 09:36:16,689 [wrapper] pandaids: 7054978788
[2026-03-15 10:36:16] 2026-03-15 09:36:16,705 [wrapper] cleanup supervisor_pilot 1068819 1058536
[2026-03-15 10:36:16] 2026-03-15 09:36:16,708 [wrapper] Test setup, not cleaning
[2026-03-15 10:36:16] 2026-03-15 09:36:16,710 [wrapper] apfmon messages muted
[2026-03-15 10:36:16] 2026-03-15 09:36:16,713 [wrapper] ==== wrapper stdout END ====
[2026-03-15 10:36:16] 2026-03-15 09:36:16,715 [wrapper] ==== wrapper stderr END ====
[2026-03-15 10:36:16]  *** Error codes and diagnostics ***
[2026-03-15 10:36:16]     "exeErrorCode": 0,
[2026-03-15 10:36:16]     "exeErrorDiag": "",
[2026-03-15 10:36:16]     "pilotErrorCode": 0,
[2026-03-15 10:36:16]     "pilotErrorDiag": "",
[2026-03-15 10:36:16]  *** Listing of results directory ***
[2026-03-15 10:36:16] total 409948
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 10:36:16] -rwx------ 1 boinc boinc     36322 Mar 14 17:44 runpilot2-wrapper.sh
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc      5111 Mar 14 17:48 queuedata.json
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc       100 Mar 15 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 10:36:16] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 08:58 run_atlas
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc       105 Mar 15 08:58 job.xml
[2026-03-15 10:36:16] -rw-r--r-- 2 boinc boinc 216076475 Mar 15 08:58 EVNT.48967083._000951.pool.root.1
[2026-03-15 10:36:16] -rw-r--r-- 2 boinc boinc    597517 Mar 15 08:58 input.tar.gz
[2026-03-15 10:36:16] -rw-r--r-- 2 boinc boinc     15845 Mar 15 08:58 start_atlas.sh
[2026-03-15 10:36:16] drwxrwx--x 2 boinc boinc      4096 Mar 15 08:58 shared
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc         0 Mar 15 08:58 boinc_setup_complete
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc      6449 Mar 15 08:58 init_data.xml
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc         0 Mar 15 08:58 boinc_lockfile
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc      2564 Mar 15 08:58 pandaJob.out
[2026-03-15 10:36:16] -rw------- 1 boinc boinc   1006481 Mar 15 08:58 agis_schedconf.cvmfs.json
[2026-03-15 10:36:16] -rw------- 1 boinc boinc   1511579 Mar 15 08:58 agis_ddmendpoints.agis.ALL.json
[2026-03-15 10:36:16] -rw------- 1 boinc boinc       427 Mar 15 08:59 workernode_map.json
[2026-03-15 10:36:16] drwx------ 5 boinc boinc      4096 Mar 15 08:59 pilot3
[2026-03-15 10:36:16] -rw------- 1 boinc boinc 197577112 Mar 15 10:34 HITS.48967085._023661.pool.root.1
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc       529 Mar 15 10:35 boinc_task_state.xml
[2026-03-15 10:36:16] -rw------- 1 boinc boinc      1015 Mar 15 10:35 memory_monitor_summary.json
[2026-03-15 10:36:16] -rw------- 1 boinc boinc    265748 Mar 15 10:35 log.48967085._023661.job.log.tgz.1
[2026-03-15 10:36:16] -rw------- 1 boinc boinc      6304 Mar 15 10:35 heartbeat.json
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc      8192 Mar 15 10:35 boinc_mmap_file
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc        27 Mar 15 10:35 wrapper_checkpoint.txt
[2026-03-15 10:36:16] -rw------- 1 boinc boinc        95 Mar 15 10:35 pilot_heartbeat.json
[2026-03-15 10:36:16] -rw------- 1 boinc boinc      4820 Mar 15 10:36 pilotlog.txt
[2026-03-15 10:36:16] -rw------- 1 boinc boinc    839897 Mar 15 10:36 log.48967085._023661.job.log.1
[2026-03-15 10:36:16] -rw------- 1 boinc boinc       357 Mar 15 10:36 output.list
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc       620 Mar 15 10:36 runtime_log
[2026-03-15 10:36:16] -rw------- 1 boinc boinc   1126400 Mar 15 10:36 result.tar.gz
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc      8916 Mar 15 10:36 runtime_log.err
[2026-03-15 10:36:16] -rw------- 1 boinc boinc       661 Mar 15 10:36 4ImNDmMHhL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmy0qLDm6P6Xjm.diag
[2026-03-15 10:36:16] -rw-r--r-- 1 boinc boinc      6238 Mar 15 10:36 stderr.txt
[2026-03-15 10:36:16] HITS file was successfully produced:
[2026-03-15 10:36:16] -rw------- 1 boinc boinc 197577112 Mar 15 10:34 shared/HITS.pool.root.1
[2026-03-15 10:36:16]  *** Contents of shared directory: ***
[2026-03-15 10:36:16] total 405668
[2026-03-15 10:36:16] -rw-r--r-- 2 boinc boinc 216076475 Mar 15 08:58 ATLAS.root_0
[2026-03-15 10:36:16] -rw-r--r-- 2 boinc boinc    597517 Mar 15 08:58 input.tar.gz
[2026-03-15 10:36:16] -rw-r--r-- 2 boinc boinc     15845 Mar 15 08:58 start_atlas.sh
[2026-03-15 10:36:16] -rw------- 1 boinc boinc 197577112 Mar 15 10:34 HITS.pool.root.1
[2026-03-15 10:36:16] -rw------- 1 boinc boinc   1126400 Mar 15 10:36 result.tar.gz
10:36:18 (1054482): run_atlas exited; CPU time 16361.814579
10:36:18 (1054482): called boinc_finish(0)

</stderr_txt>
]]>

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