Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:18 (3123987): wrapper (7.7.26015): starting
12:43:18 (3123987): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 12:43:18] Arguments: --nthreads 4
[2026-03-15 12:43:18] Threads: 4
[2026-03-15 12:43:18] Checking for CVMFS
[2026-03-15 12:43:18] No cvmfs_config command found, will try listing directly
[2026-03-15 12:43:18] CVMFS is ok
[2026-03-15 12:43:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 12:43:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 12:43:18] Further information can be found at the LHC@home message board.
[2026-03-15 12:43:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 12:43:18] Checking for apptainer binary...
[2026-03-15 12:43:18] which: no apptainer in ((null))
[2026-03-15 12:43:18] apptainer is not installed, using version from CVMFS
[2026-03-15 12:43:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 12:43:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/15/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-15 12:43:18] apptainer works
[2026-03-15 12:43:18] Set ATHENA_PROC_NUMBER=4
[2026-03-15 12:43:18] Set ATHENA_CORE_NUMBER=4
[2026-03-15 12:43:18] Starting ATLAS job with PandaID=7047572896
[2026-03-15 12:43:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 15:49:01]  *** The last 200 lines of the pilot log: ***
[2026-03-15 15:49:01] 2026-03-15 14:48:04,864 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 15:49:01] 2026-03-15 14:48:05,346 | INFO     | job 7047572896 has state=finished
[2026-03-15 15:49:01] 2026-03-15 14:48:05,346 | INFO     | preparing for final server update for job 7047572896 in state='finished'
[2026-03-15 15:49:01] 2026-03-15 14:48:05,347 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/15/PanDA_Pilot-7047572896/jobReport.json
[2026-03-15 15:49:01] 2026-03-15 14:48:05,349 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/15/workernode_map.json
[2026-03-15 15:49:01] 2026-03-15 14:48:05,350 | INFO     | this job has now completed (state=finished)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,350 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,350 | INFO     | log transfer has been attempted: DONE
[2026-03-15 15:49:01] 2026-03-15 14:48:05,350 | INFO     | job 7047572896 has finished - writing final server update
[2026-03-15 15:49:01] 2026-03-15 14:48:05,351 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2745164/.job.ad'
[2026-03-15 15:49:01] 2026-03-15 14:48:05,351 | INFO     | total number of processed events: 400 (read)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,363 | INFO     | using path: /var/lib/boinc/var/slot16/slots/15/PanDA_Pilot-7047572896/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,364 | INFO     | extracted standard info from prmon json
[2026-03-15 15:49:01] 2026-03-15 14:48:05,364 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 15:49:01] 2026-03-15 14:48:05,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 15:49:01] 2026-03-15 14:48:05,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 15:49:01] 2026-03-15 14:48:05,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 15:49:01] 2026-03-15 14:48:05,368 | INFO     | fitting pss+swap vs Time
[2026-03-15 15:49:01] 2026-03-15 14:48:05,369 | INFO     | sum of square deviations: 1838657730.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,370 | INFO     | sum of deviations: 19533294340.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,370 | INFO     | mean x: 1773580532.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,370 | INFO     | mean y: 2320511.6961325966
[2026-03-15 15:49:01] 2026-03-15 14:48:05,370 | INFO     | intersect: -18839615103.612644
[2026-03-15 15:49:01] 2026-03-15 14:48:05,371 | INFO     | chi2: 1.3642047408362816
[2026-03-15 15:49:01] 2026-03-15 14:48:05,371 | INFO     | sum of square deviations: 1690450300.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,372 | INFO     | sum of deviations: 18932231328.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,372 | INFO     | mean x: 1773580379.5
[2026-03-15 15:49:01] 2026-03-15 14:48:05,372 | INFO     | mean y: 2319893.0681818184
[2026-03-15 15:49:01] 2026-03-15 14:48:05,372 | INFO     | intersect: -19860928392.608143
[2026-03-15 15:49:01] 2026-03-15 14:48:05,373 | INFO     | chi2: 1.3652477150209466
[2026-03-15 15:49:01] 2026-03-15 14:48:05,373 | INFO     | current chi2=1.3652477150209466 (change=-0.07645290720992236 %)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,373 | INFO     | right removable region: 175
[2026-03-15 15:49:01] 2026-03-15 14:48:05,373 | INFO     | sum of square deviations: 1690450300.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,374 | INFO     | sum of deviations: -4183452041.000001
[2026-03-15 15:49:01] 2026-03-15 14:48:05,374 | INFO     | mean x: 1773580684.5
[2026-03-15 15:49:01] 2026-03-15 14:48:05,374 | INFO     | mean y: 2344580.5454545454
[2026-03-15 15:49:01] 2026-03-15 14:48:05,375 | INFO     | intersect: 4391524040.272668
[2026-03-15 15:49:01] 2026-03-15 14:48:05,375 | INFO     | chi2: 0.02831565535572108
[2026-03-15 15:49:01] 2026-03-15 14:48:05,375 | INFO     | current chi2=0.02831565535572108 (change=97.92438374474764 %)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,375 | INFO     | sum of square deviations: 1550429070.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,376 | INFO     | sum of deviations: -3928299715.9999924
[2026-03-15 15:49:01] 2026-03-15 14:48:05,377 | INFO     | mean x: 1773580837.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,377 | INFO     | mean y: 2344275.760233918
[2026-03-15 15:49:01] 2026-03-15 14:48:05,377 | INFO     | intersect: 4496040397.112066
[2026-03-15 15:49:01] 2026-03-15 14:48:05,377 | INFO     | chi2: 0.024899936618280556
[2026-03-15 15:49:01] 2026-03-15 14:48:05,377 | INFO     | current chi2=0.024899936618280556 (change=12.063004350525793 %)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,377 | INFO     | left removable region: 20
[2026-03-15 15:49:01] 2026-03-15 14:48:05,378 | INFO     | sum of square deviations: 1154663510.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,378 | INFO     | sum of deviations: 981908887.0000002
[2026-03-15 15:49:01] 2026-03-15 14:48:05,379 | INFO     | mean x: 1773580959.0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,379 | INFO     | mean y: 2338113.316129032
[2026-03-15 15:49:01] 2026-03-15 14:48:05,379 | INFO     | intersect: -1505889080.471335
[2026-03-15 15:49:01] 2026-03-15 14:48:05,379 | INFO     | chi2: 0.008593808724189524
[2026-03-15 15:49:01] 2026-03-15 14:48:05,379 | INFO     | current memory leak: 0.85 B/s (using 155 data points, chi2=0.01)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | could have reported an average CPU frequency of 2493 MHz (10 samples)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | ..............................
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | . Timing measurements:
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | . get job = 0 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | . initial setup = 6 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | . payload setup = 7 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | . stage-in = 0 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,380 | INFO     | . payload execution = 11042 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,381 | INFO     | . stage-out = 1 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,381 | INFO     | . log creation = 0 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,381 | INFO     | ..............................
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | 
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | job summary report
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | --------------------------------------------------
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | PanDA job id: 7047572896
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | task id: 48955010
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | errors: (none)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,550 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | pilot state: finished 
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | transexitcode: 0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | exeerrorcode: 0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | exeerrordiag: 
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | exitcode: 0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | exitmsg: OK
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | cpuconsumptiontime: 41446 s
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | nevents: 400
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | neventsw: 0
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | pid: 3133077
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | pgrp: 3133077
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | corecount: 4
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | event service: False
[2026-03-15 15:49:01] 2026-03-15 14:48:05,551 | INFO     | sizes: {0: 2279759, 1: 2280220, 12: 2280220, 11052: 2309621, 11053: 2309620, 11054: 2318698, 11056: 2319076}
[2026-03-15 15:49:01] 2026-03-15 14:48:05,552 | INFO     | --------------------------------------------------
[2026-03-15 15:49:01] 2026-03-15 14:48:05,552 | INFO     | 
[2026-03-15 15:49:01] 2026-03-15 14:48:05,552 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/15
[2026-03-15 15:49:01] 2026-03-15 14:48:05,576 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,576 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,579 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,579 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 15:49:01] 2026-03-15 14:48:05,579 | INFO     | job 7047572896 has completed (purged errors)
[2026-03-15 15:49:01] 2026-03-15 14:48:05,579 | INFO     | overall cleanup function is called
[2026-03-15 15:49:01] 2026-03-15 14:48:06,587 | INFO     | --- collectZombieJob: --- 10, [3133077]
[2026-03-15 15:49:01] 2026-03-15 14:48:06,587 | INFO     | zombie collector waiting for pid 3133077
[2026-03-15 15:49:01] 2026-03-15 14:48:06,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 15:49:01] 2026-03-15 14:48:06,587 | INFO     | collected zombie processes
[2026-03-15 15:49:01] 2026-03-15 14:48:06,587 | INFO     | will attempt to kill all subprocesses of pid=3133077
[2026-03-15 15:49:01] 2026-03-15 14:48:06,964 | INFO     | process IDs to be killed: [3133077] (in reverse order)
[2026-03-15 15:49:01] 2026-03-15 14:48:07,101 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 15:49:01] 2026-03-15 14:48:07,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 15:49:01] 2026-03-15 14:48:07,115 | INFO     | did not find any defunct processes belonging to 3133077
[2026-03-15 15:49:01] 2026-03-15 14:48:07,128 | INFO     | did not find any defunct processes belonging to 3133077
[2026-03-15 15:49:01] 2026-03-15 14:48:07,129 | INFO     | ready for new job
[2026-03-15 15:49:01] 2026-03-15 14:48:07,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 15:49:01] 2026-03-15 14:48:07,131 | INFO     | **************************************
[2026-03-15 15:49:01] 2026-03-15 14:48:07,131 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 15:49:01] 2026-03-15 14:48:07,131 | INFO     | **************************************
[2026-03-15 15:49:01] 2026-03-15 14:48:07,131 | INFO     | 
[2026-03-15 15:49:01] 2026-03-15 14:48:07,135 | INFO     | architecture information:
[2026-03-15 15:49:01] 2026-03-15 14:48:07,136 | INFO     | executing command: cat /etc/os-release
[2026-03-15 15:49:01] 2026-03-15 14:48:07,155 | INFO     | cat /etc/os-release:
[2026-03-15 15:49:01] NAME="CentOS Linux"
[2026-03-15 15:49:01] VERSION="7 (Core)"
[2026-03-15 15:49:01] ID="centos"
[2026-03-15 15:49:01] ID_LIKE="rhel fedora"
[2026-03-15 15:49:01] VERSION_ID="7"
[2026-03-15 15:49:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 15:49:01] ANSI_COLOR="0;31"
[2026-03-15 15:49:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 15:49:01] HOME_URL="https://www.centos.org/"
[2026-03-15 15:49:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 15:49:01] 
[2026-03-15 15:49:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 15:49:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 15:49:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 15:49:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 15:49:01] 
[2026-03-15 15:49:01] 2026-03-15 14:48:07,155 | INFO     | **************************************
[2026-03-15 15:49:01] 2026-03-15 14:48:07,658 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/15
[2026-03-15 15:49:01] 2026-03-15 14:48:07,679 | INFO     | sufficient remaining disk space (38068551680 B)
[2026-03-15 15:49:01] 2026-03-15 14:48:07,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 15:49:01] 2026-03-15 14:48:07,680 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 15:49:01] 2026-03-15 14:48:07,680 | INFO     | update_server=False
[2026-03-15 15:49:01] 2026-03-15 14:48:07,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 15:49:01] 2026-03-15 14:48:07,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 15:49:01] 2026-03-15 14:48:07,680 | INFO     | aborting loop
[2026-03-15 15:49:01] 2026-03-15 14:48:08,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 15:49:01] 2026-03-15 14:48:08,648 | INFO     | all payload control threads have been joined
[2026-03-15 15:49:01] 2026-03-15 14:48:08,685 | INFO     | [job] retrieve thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:08,686 | INFO     | [job] job monitor thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:08,698 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:08,718 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:08,755 | INFO     | all data control threads have been joined
[2026-03-15 15:49:01] 2026-03-15 14:48:08,949 | INFO     | all job control threads have been joined
[2026-03-15 15:49:01] 2026-03-15 14:48:09,053 | INFO     | [payload] validate_post thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:09,320 | INFO     | [payload] failed_post thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:09,484 | INFO     | [job] validate thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:09,653 | INFO     | [payload] control thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:09,760 | INFO     | [data] control thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:09,904 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:09,954 | INFO     | [job] control thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:10,028 | INFO     | [data] copytool_in thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:10,043 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:10,399 | INFO     | [data] copytool_out thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:10,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 15:49:01] 2026-03-15 14:48:10,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 15:49:01] 2026-03-15 14:48:11,492 | INFO     | [job] queue monitor thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:14,966 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 15:49:01] 2026-03-15 14:48:37,756 | INFO     | PID=3128080 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 15:49:01] 2026-03-15 14:48:37,756 | INFO     | .. there are 13 such processes running
[2026-03-15 15:49:01] 2026-03-15 14:48:37,757 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 15:49:01] 2026-03-15 14:48:37,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 15:49:01] 2026-03-15 14:48:37,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 15:49:01] 2026-03-15 14:48:55,016 | INFO     | [monitor] cgroup control has ended
[2026-03-15 15:49:01] 2026-03-15 14:48:56,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22596248954688)>', '<ExcThread(monitor, started 22596013016832)>']
[2026-03-15 15:49:01] 2026-03-15 14:48:56,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 15:49:01] 2026-03-15 14:48:56,852 | INFO     | [monitor] control thread has ended
[2026-03-15 15:49:01] 2026-03-15 14:49:01,180 | INFO     | all workflow threads have been joined
[2026-03-15 15:49:01] 2026-03-15 14:49:01,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 15:49:01] 2026-03-15 14:49:01,181 | INFO     | traces error code: 0
[2026-03-15 15:49:01] 2026-03-15 14:49:01,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 15:49:01] 2026-03-15 14:49:01,370 [wrapper] ==== pilot stdout END ====
[2026-03-15 15:49:01] 2026-03-15 14:49:01,372 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 15:49:01] 2026-03-15 14:49:01,375 [wrapper] pilotpid: 3128080
[2026-03-15 15:49:01] 2026-03-15 14:49:01,377 [wrapper] Pilot exit status: 0
[2026-03-15 15:49:01] 2026-03-15 14:49:01,388 [wrapper] pandaids: 7047572896
[2026-03-15 15:49:01] 2026-03-15 14:49:01,478 [wrapper] cleanup supervisor_pilot 3371293 3128081
[2026-03-15 15:49:01] 2026-03-15 14:49:01,482 [wrapper] Test setup, not cleaning
[2026-03-15 15:49:01] 2026-03-15 14:49:01,486 [wrapper] apfmon messages muted
[2026-03-15 15:49:01] 2026-03-15 14:49:01,489 [wrapper] ==== wrapper stdout END ====
[2026-03-15 15:49:01] 2026-03-15 14:49:01,493 [wrapper] ==== wrapper stderr END ====
[2026-03-15 15:49:01]  *** Error codes and diagnostics ***
[2026-03-15 15:49:01]     "exeErrorCode": 0,
[2026-03-15 15:49:01]     "exeErrorDiag": "",
[2026-03-15 15:49:01]     "pilotErrorCode": 0,
[2026-03-15 15:49:01]     "pilotErrorDiag": "",
[2026-03-15 15:49:01]  *** Listing of results directory ***
[2026-03-15 15:49:01] total 618352
[2026-03-15 15:49:01] -rwx------. 1 boinc boinc     36322 Mar 14 19:24 runpilot2-wrapper.sh
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc      5111 Mar 14 19:26 queuedata.json
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc    585013 Mar 14 19:26 pilot3.tar.gz
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc       100 Mar 15 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 15:49:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 12:43 run_atlas
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc       105 Mar 15 12:43 job.xml
[2026-03-15 15:49:01] -rw-r--r--. 2 boinc boinc 445750824 Mar 15 12:43 EVNT.46701403._002008.pool.root.1
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc      6563 Mar 15 12:43 init_data.xml
[2026-03-15 15:49:01] drwxrwx--x. 2 boinc boinc      4096 Mar 15 12:43 shared
[2026-03-15 15:49:01] -rw-r--r--. 2 boinc boinc    597525 Mar 15 12:43 input.tar.gz
[2026-03-15 15:49:01] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:43 start_atlas.sh
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc         0 Mar 15 12:43 boinc_lockfile
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc      2564 Mar 15 12:43 pandaJob.out
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc   1006481 Mar 15 12:43 agis_schedconf.cvmfs.json
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc       452 Mar 15 12:43 workernode_map.json
[2026-03-15 15:49:01] drwx------. 5 boinc boinc      4096 Mar 15 12:43 pilot3
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc 179666442 Mar 15 15:47 HITS.48955010._049122.pool.root.1
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc       531 Mar 15 15:47 boinc_task_state.xml
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc      1032 Mar 15 15:47 memory_monitor_summary.json
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc        95 Mar 15 15:47 pilot_heartbeat.json
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc   1511579 Mar 15 15:48 agis_ddmendpoints.agis.ALL.json
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc    356638 Mar 15 15:48 log.48955010._049122.job.log.tgz.1
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc      6405 Mar 15 15:48 heartbeat.json
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc      8192 Mar 15 15:48 boinc_mmap_file
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc        28 Mar 15 15:48 wrapper_checkpoint.txt
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc      4830 Mar 15 15:49 pilotlog.txt
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc   1563419 Mar 15 15:49 log.48955010._049122.job.log.1
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc       357 Mar 15 15:49 output.list
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc       620 Mar 15 15:49 runtime_log
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc   1935360 Mar 15 15:49 result.tar.gz
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc      9222 Mar 15 15:49 runtime_log.err
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc       665 Mar 15 15:49 7l4NDmnpiL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmR3tLDm9cg5Cn.diag
[2026-03-15 15:49:01] -rw-r--r--. 1 boinc boinc     21161 Mar 15 15:49 stderr.txt
[2026-03-15 15:49:01] HITS file was successfully produced:
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc 179666442 Mar 15 15:47 shared/HITS.pool.root.1
[2026-03-15 15:49:01]  *** Contents of shared directory: ***
[2026-03-15 15:49:01] total 613260
[2026-03-15 15:49:01] -rw-r--r--. 2 boinc boinc 445750824 Mar 15 12:43 ATLAS.root_0
[2026-03-15 15:49:01] -rw-r--r--. 2 boinc boinc    597525 Mar 15 12:43 input.tar.gz
[2026-03-15 15:49:01] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:43 start_atlas.sh
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc 179666442 Mar 15 15:47 HITS.pool.root.1
[2026-03-15 15:49:01] -rw-------. 1 boinc boinc   1935360 Mar 15 15:49 result.tar.gz
15:49:02 (3123987): run_atlas exited; CPU time 41916.276162
15:49:02 (3123987): called boinc_finish(0)

</stderr_txt>
]]>

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