Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:17:28 (19413): wrapper (7.7.26015): starting
07:17:28 (19413): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 07:17:28] Arguments: --nthreads 8
[2026-03-15 07:17:28] Threads: 8
[2026-03-15 07:17:28] Checking for CVMFS
[2026-03-15 07:17:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 07:17:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 07:17:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 07:17:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 07:17:32] 2.11.2.0 13854 128643 138808 157304 3 13 21963468 25165824 4834 130560 151 50076907 99.809 38140640 1166 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 07:17:32] CVMFS is ok
[2026-03-15 07:17:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 07:17:32] Checking for apptainer binary...
[2026-03-15 07:17:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 07:17:32] Running /usr/bin/apptainer --version
[2026-03-15 07:17:32] apptainer version 1.3.2-1.el7
[2026-03-15 07:17:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 07:17:39] cg-vwn417.simple-grid.lan
[2026-03-15 07:17:39] apptainer works
[2026-03-15 07:17:39] Set ATHENA_PROC_NUMBER=8
[2026-03-15 07:17:39] Set ATHENA_CORE_NUMBER=8
[2026-03-15 07:17:39] Starting ATLAS job with PandaID=7055034187
[2026-03-15 07:17:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 12:27:11]  *** The last 200 lines of the pilot log: ***
[2026-03-15 12:27:11] 2026-03-15 11:26:21,512 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7055034187/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,513 | INFO     | extracted standard info from prmon json
[2026-03-15 12:27:11] 2026-03-15 11:26:21,513 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 12:27:11] 2026-03-15 11:26:21,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 12:27:11] 2026-03-15 11:26:21,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 12:27:11] 2026-03-15 11:26:21,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 12:27:11] 2026-03-15 11:26:21,520 | INFO     | fitting pss+swap vs Time
[2026-03-15 12:27:11] 2026-03-15 11:26:21,521 | INFO     | sum of square deviations: 7960484140.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,524 | INFO     | sum of deviations: 103551694725.99995
[2026-03-15 12:27:11] 2026-03-15 11:26:21,525 | INFO     | mean x: 1773564960.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,525 | INFO     | mean y: 2445919.359322034
[2026-03-15 12:27:11] 2026-03-15 11:26:21,525 | INFO     | intersect: -23068469628.579994
[2026-03-15 12:27:11] 2026-03-15 11:26:21,526 | INFO     | chi2: 7.4101317222086305
[2026-03-15 12:27:11] 2026-03-15 11:26:21,526 | INFO     | sum of square deviations: 7562532492.5
[2026-03-15 12:27:11] 2026-03-15 11:26:21,532 | INFO     | sum of deviations: 120901525847.00003
[2026-03-15 12:27:11] 2026-03-15 11:26:21,533 | INFO     | mean x: 1773564807.5
[2026-03-15 12:27:11] 2026-03-15 11:26:21,533 | INFO     | mean y: 2452465.0344827585
[2026-03-15 12:27:11] 2026-03-15 11:26:21,533 | INFO     | intersect: -28351368378.438858
[2026-03-15 12:27:11] 2026-03-15 11:26:21,533 | INFO     | chi2: 6.694219765083284
[2026-03-15 12:27:11] 2026-03-15 11:26:21,533 | INFO     | current chi2=6.694219765083284 (change=9.661258179523491 %)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,534 | INFO     | right removable region: 289
[2026-03-15 12:27:11] 2026-03-15 11:26:21,534 | INFO     | sum of square deviations: 7562532492.5
[2026-03-15 12:27:11] 2026-03-15 11:26:21,537 | INFO     | sum of deviations: 3116000231.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,537 | INFO     | mean x: 1773565112.5
[2026-03-15 12:27:11] 2026-03-15 11:26:21,538 | INFO     | mean y: 2484383.0620689653
[2026-03-15 12:27:11] 2026-03-15 11:26:21,538 | INFO     | intersect: -728279987.9636786
[2026-03-15 12:27:11] 2026-03-15 11:26:21,538 | INFO     | chi2: 2.7853604247969033
[2026-03-15 12:27:11] 2026-03-15 11:26:21,538 | INFO     | current chi2=2.7853604247969033 (change=62.41145867287348 %)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,539 | INFO     | sum of square deviations: 7178069470.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,542 | INFO     | sum of deviations: -54944342547.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,542 | INFO     | mean x: 1773565265.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,542 | INFO     | mean y: 2507311.701754386
[2026-03-15 12:27:11] 2026-03-15 11:26:21,543 | INFO     | intersect: 13578215635.073668
[2026-03-15 12:27:11] 2026-03-15 11:26:21,543 | INFO     | chi2: 1.0011119577207608
[2026-03-15 12:27:11] 2026-03-15 11:26:21,543 | INFO     | current chi2=1.0011119577207608 (change=64.05808207769887 %)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,544 | INFO     | sum of square deviations: 6806862510.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,547 | INFO     | sum of deviations: -55891737664.5
[2026-03-15 12:27:11] 2026-03-15 11:26:21,547 | INFO     | mean x: 1773565417.5
[2026-03-15 12:27:11] 2026-03-15 11:26:21,547 | INFO     | mean y: 2507670.6464285715
[2026-03-15 12:27:11] 2026-03-15 11:26:21,547 | INFO     | intersect: 14565406935.926199
[2026-03-15 12:27:11] 2026-03-15 11:26:21,548 | INFO     | chi2: 0.9722448040983667
[2026-03-15 12:27:11] 2026-03-15 11:26:21,548 | INFO     | current chi2=0.9722448040983667 (change=2.8835090221193824 %)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,548 | INFO     | left removable region: 30
[2026-03-15 12:27:11] 2026-03-15 11:26:21,549 | INFO     | sum of square deviations: 5387301010.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,551 | INFO     | sum of deviations: -9201978282.999998
[2026-03-15 12:27:11] 2026-03-15 11:26:21,551 | INFO     | mean x: 1773565692.0
[2026-03-15 12:27:11] 2026-03-15 11:26:21,552 | INFO     | mean y: 2502982.698841699
[2026-03-15 12:27:11] 2026-03-15 11:26:21,552 | INFO     | intersect: 3031907307.97486
[2026-03-15 12:27:11] 2026-03-15 11:26:21,552 | INFO     | chi2: 0.1000027807246771
[2026-03-15 12:27:11] 2026-03-15 11:26:21,552 | INFO     | current memory leak: -1.71 B/s (using 259 data points, chi2=0.10)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,556 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | ..............................
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . Timing measurements:
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . get job = 0 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . initial setup = 92 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . payload setup = 115 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . stage-in = 0 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . payload execution = 18093 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,557 | INFO     | . stage-out = 3 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,558 | INFO     | . log creation = 1 s
[2026-03-15 12:27:11] 2026-03-15 11:26:21,558 | INFO     | ..............................
[2026-03-15 12:27:11] 2026-03-15 11:26:21,805 | INFO     | time since job start (18232s) is within the limit (345600.0s)
[2026-03-15 12:27:11] 2026-03-15 11:26:22,139 | INFO     | 
[2026-03-15 12:27:11] 2026-03-15 11:26:22,139 | INFO     | job summary report
[2026-03-15 12:27:11] 2026-03-15 11:26:22,139 | INFO     | --------------------------------------------------
[2026-03-15 12:27:11] 2026-03-15 11:26:22,139 | INFO     | PanDA job id: 7055034187
[2026-03-15 12:27:11] 2026-03-15 11:26:22,139 | INFO     | task id: 48967011
[2026-03-15 12:27:11] 2026-03-15 11:26:22,139 | INFO     | errors: (none)
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | pilot state: finished 
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | transexitcode: 0
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | exeerrorcode: 0
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | exeerrordiag: 
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | exitcode: 0
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | exitmsg: OK
[2026-03-15 12:27:11] 2026-03-15 11:26:22,140 | INFO     | cpuconsumptiontime: 69429 s
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | nevents: 400
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | neventsw: 0
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | pid: 28034
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | pgrp: 28034
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | corecount: 8
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | event service: False
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | sizes: {0: 2279808, 1: 2253562, 2: 2280297, 12: 2280297, 18213: 2312593, 18217: 2321591, 18219: 2321775, 18220: 2321969}
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | --------------------------------------------------
[2026-03-15 12:27:11] 2026-03-15 11:26:22,141 | INFO     | 
[2026-03-15 12:27:11] 2026-03-15 11:26:22,142 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-15 12:27:11] 2026-03-15 11:26:22,371 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,373 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 12:27:11] 2026-03-15 11:26:22,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 12:27:11] 2026-03-15 11:26:22,374 | INFO     | job 7055034187 has completed (purged errors)
[2026-03-15 12:27:11] 2026-03-15 11:26:22,374 | INFO     | overall cleanup function is called
[2026-03-15 12:27:11] 2026-03-15 11:26:22,980 | INFO     | PID=23519 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 12:27:11] 2026-03-15 11:26:22,980 | INFO     | .. there are 9 such processes running
[2026-03-15 12:27:11] 2026-03-15 11:26:23,383 | INFO     | --- collectZombieJob: --- 10, [28034]
[2026-03-15 12:27:11] 2026-03-15 11:26:23,383 | INFO     | zombie collector waiting for pid 28034
[2026-03-15 12:27:11] 2026-03-15 11:26:23,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 12:27:11] 2026-03-15 11:26:23,383 | INFO     | collected zombie processes
[2026-03-15 12:27:11] 2026-03-15 11:26:23,383 | INFO     | will attempt to kill all subprocesses of pid=28034
[2026-03-15 12:27:11] 2026-03-15 11:26:23,486 | INFO     | process IDs to be killed: [28034] (in reverse order)
[2026-03-15 12:27:11] 2026-03-15 11:26:24,168 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 12:27:11] 2026-03-15 11:26:24,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 12:27:11] 2026-03-15 11:26:24,172 | INFO     | did not find any defunct processes belonging to 28034
[2026-03-15 12:27:11] 2026-03-15 11:26:24,175 | INFO     | did not find any defunct processes belonging to 28034
[2026-03-15 12:27:11] 2026-03-15 11:26:24,176 | INFO     | ready for new job
[2026-03-15 12:27:11] 2026-03-15 11:26:24,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 12:27:11] 2026-03-15 11:26:24,178 | INFO     | **************************************
[2026-03-15 12:27:11] 2026-03-15 11:26:24,178 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 12:27:11] 2026-03-15 11:26:24,179 | INFO     | **************************************
[2026-03-15 12:27:11] 2026-03-15 11:26:24,179 | INFO     | 
[2026-03-15 12:27:11] 2026-03-15 11:26:24,179 | INFO     | pilot is running in a VM
[2026-03-15 12:27:11] 2026-03-15 11:26:24,179 | INFO     | architecture information:
[2026-03-15 12:27:11] 2026-03-15 11:26:24,186 | INFO     | executing command: cat /etc/os-release
[2026-03-15 12:27:11] 2026-03-15 11:26:24,351 | INFO     | cat /etc/os-release:
[2026-03-15 12:27:11] NAME="CentOS Linux"
[2026-03-15 12:27:11] VERSION="7 (Core)"
[2026-03-15 12:27:11] ID="centos"
[2026-03-15 12:27:11] ID_LIKE="rhel fedora"
[2026-03-15 12:27:11] VERSION_ID="7"
[2026-03-15 12:27:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 12:27:11] ANSI_COLOR="0;31"
[2026-03-15 12:27:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 12:27:11] HOME_URL="https://www.centos.org/"
[2026-03-15 12:27:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 12:27:11] 
[2026-03-15 12:27:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 12:27:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 12:27:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 12:27:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 12:27:11] 
[2026-03-15 12:27:11] 2026-03-15 11:26:24,352 | INFO     | **************************************
[2026-03-15 12:27:11] 2026-03-15 11:26:24,855 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-15 12:27:11] 2026-03-15 11:26:25,083 | INFO     | sufficient remaining disk space (495439577088 B)
[2026-03-15 12:27:11] 2026-03-15 11:26:25,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 12:27:11] 2026-03-15 11:26:25,084 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 12:27:11] 2026-03-15 11:26:25,084 | INFO     | update_server=False
[2026-03-15 12:27:11] 2026-03-15 11:26:25,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 12:27:11] 2026-03-15 11:26:25,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:27:11] 2026-03-15 11:26:25,168 | INFO     | aborting loop
[2026-03-15 12:27:11] 2026-03-15 11:26:25,328 | INFO     | all payload control threads have been joined
[2026-03-15 12:27:11] 2026-03-15 11:26:25,366 | INFO     | all job control threads have been joined
[2026-03-15 12:27:11] 2026-03-15 11:26:25,771 | INFO     | all data control threads have been joined
[2026-03-15 12:27:11] 2026-03-15 11:26:26,090 | INFO     | [job] retrieve thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:26,174 | INFO     | [job] job monitor thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:26,249 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:26,264 | INFO     | [payload] failed_post thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:26,334 | INFO     | [payload] control thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:26,372 | INFO     | [job] control thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:26,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 12:27:11] 2026-03-15 11:26:26,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:27:11] 2026-03-15 11:26:26,777 | INFO     | [data] control thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,006 | INFO     | [data] copytool_in thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,007 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,118 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 12:27:11] 2026-03-15 11:26:27,227 | INFO     | [payload] validate_post thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,515 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,522 | INFO     | [job] validate thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:27,728 | INFO     | [job] queue monitor thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:28,529 | INFO     | [data] copytool_out thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:31,149 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 12:27:11] 2026-03-15 11:26:55,203 | INFO     | PID=23519 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 12:27:11] 2026-03-15 11:26:55,203 | INFO     | .. there are 9 such processes running
[2026-03-15 12:27:11] 2026-03-15 11:26:55,204 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 12:27:11] 2026-03-15 11:26:55,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 12:27:11] 2026-03-15 11:26:55,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 12:27:11] 2026-03-15 11:27:00,279 | INFO     | [monitor] cgroup control has ended
[2026-03-15 12:27:11] 2026-03-15 11:27:01,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994188080960)>', '<ExcThread(monitor, started 139993452377856)>']
[2026-03-15 12:27:11] 2026-03-15 11:27:02,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 12:27:11] 2026-03-15 11:27:02,245 | INFO     | [monitor] control thread has ended
[2026-03-15 12:27:11] 2026-03-15 11:27:06,743 | INFO     | all workflow threads have been joined
[2026-03-15 12:27:11] 2026-03-15 11:27:06,743 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 12:27:11] 2026-03-15 11:27:06,743 | INFO     | traces error code: 0
[2026-03-15 12:27:11] 2026-03-15 11:27:06,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 12:27:11] 2026-03-15 11:27:07,080 [wrapper] ==== pilot stdout END ====
[2026-03-15 12:27:11] 2026-03-15 11:27:07,132 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 12:27:11] 2026-03-15 11:27:07,215 [wrapper] pilotpid: 23519
[2026-03-15 12:27:11] 2026-03-15 11:27:07,281 [wrapper] Pilot exit status: 0
[2026-03-15 12:27:11] 2026-03-15 11:27:07,568 [wrapper] pandaids: 7055034187
[2026-03-15 12:27:11] 2026-03-15 11:27:08,413 [wrapper] cleanup supervisor_pilot 20065 23520
[2026-03-15 12:27:11] 2026-03-15 11:27:08,536 [wrapper] Test setup, not cleaning
[2026-03-15 12:27:11] 2026-03-15 11:27:08,632 [wrapper] apfmon messages muted
[2026-03-15 12:27:11] 2026-03-15 11:27:08,731 [wrapper] ==== wrapper stdout END ====
[2026-03-15 12:27:11] 2026-03-15 11:27:08,839 [wrapper] ==== wrapper stderr END ====
[2026-03-15 12:27:11]  *** Error codes and diagnostics ***
[2026-03-15 12:27:11]     "exeErrorCode": 0,
[2026-03-15 12:27:11]     "exeErrorDiag": "",
[2026-03-15 12:27:11]     "pilotErrorCode": 0,
[2026-03-15 12:27:11]     "pilotErrorDiag": "",
[2026-03-15 12:27:11]  *** Listing of results directory ***
[2026-03-15 12:27:11] total 422628
[2026-03-15 12:27:11] -rwx------. 1 boinc boinc     36322 Mar 14 19:23 runpilot2-wrapper.sh
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc      5111 Mar 14 19:26 queuedata.json
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc    585013 Mar 14 19:26 pilot3.tar.gz
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc       100 Mar 15 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 12:27:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 07:17 run_atlas
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc       105 Mar 15 07:17 job.xml
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc      6390 Mar 15 07:17 init_data.xml
[2026-03-15 12:27:11] -rw-r--r--. 2 boinc boinc 218744438 Mar 15 07:17 EVNT.48967008._000563.pool.root.1
[2026-03-15 12:27:11] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:17 start_atlas.sh
[2026-03-15 12:27:11] drwxrwx--x. 2 boinc boinc        68 Mar 15 07:17 shared
[2026-03-15 12:27:11] -rw-r--r--. 2 boinc boinc    597534 Mar 15 07:17 input.tar.gz
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc         0 Mar 15 07:17 boinc_lockfile
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc      2563 Mar 15 07:17 pandaJob.out
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc       415 Mar 15 07:22 workernode_map.json
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc   1006481 Mar 15 07:22 agis_schedconf.cvmfs.json
[2026-03-15 12:27:11] drwx------. 5 boinc boinc      4096 Mar 15 07:22 pilot3
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc 204041751 Mar 15 12:24 HITS.48967011._014624.pool.root.1
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc       531 Mar 15 12:25 boinc_task_state.xml
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc        95 Mar 15 12:25 pilot_heartbeat.json
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc      1017 Mar 15 12:26 memory_monitor_summary.json
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc   1511579 Mar 15 12:26 agis_ddmendpoints.agis.ALL.json
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc    502612 Mar 15 12:26 log.48967011._014624.job.log.tgz.1
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc      6321 Mar 15 12:26 heartbeat.json
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc      8192 Mar 15 12:26 boinc_mmap_file
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc        28 Mar 15 12:26 wrapper_checkpoint.txt
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc      4880 Mar 15 12:27 pilotlog.txt
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc   2529360 Mar 15 12:27 log.48967011._014624.job.log.1
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc       357 Mar 15 12:27 output.list
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc       620 Mar 15 12:27 runtime_log
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc   3051520 Mar 15 12:27 result.tar.gz
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc       656 Mar 15 12:27 Tz9KDmJpiL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7GrLDmhXFAPm.diag
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc      8816 Mar 15 12:27 runtime_log.err
[2026-03-15 12:27:11] -rw-r--r--. 1 boinc boinc     20829 Mar 15 12:27 stderr.txt
[2026-03-15 12:27:11] HITS file was successfully produced:
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc 204041751 Mar 15 12:24 shared/HITS.pool.root.1
[2026-03-15 12:27:11]  *** Contents of shared directory: ***
[2026-03-15 12:27:11] total 416460
[2026-03-15 12:27:11] -rw-r--r--. 2 boinc boinc 218744438 Mar 15 07:17 ATLAS.root_0
[2026-03-15 12:27:11] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:17 start_atlas.sh
[2026-03-15 12:27:11] -rw-r--r--. 2 boinc boinc    597534 Mar 15 07:17 input.tar.gz
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc 204041751 Mar 15 12:24 HITS.pool.root.1
[2026-03-15 12:27:11] -rw-------. 1 boinc boinc   3051520 Mar 15 12:27 result.tar.gz
12:27:12 (19413): run_atlas exited; CPU time 69714.521432
12:27:12 (19413): called boinc_finish(0)

</stderr_txt>
]]>

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