Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:57:21 (30881): wrapper (7.7.26015): starting
21:57:21 (30881): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 21:57:21] Arguments: --nthreads 12
[2026-03-14 21:57:21] Threads: 12
[2026-03-14 21:57:21] Checking for CVMFS
[2026-03-14 21:57:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 21:57:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 21:57:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 21:57:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 21:57:21] 2.11.2.0 2913 444011 93728 157297 2 50 19688552 20275200 1 130560 1 192819715 99.951 25924806 16981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 21:57:21] CVMFS is ok
[2026-03-14 21:57:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 21:57:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 21:57:21] Further information can be found at the LHC@home message board.
[2026-03-14 21:57:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 21:57:21] Checking for apptainer binary...
[2026-03-14 21:57:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 21:57:21] Running /usr/bin/apptainer --version
[2026-03-14 21:57:21] apptainer version 1.3.2-1.el7
[2026-03-14 21:57:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 21:57:23] c-205-6.aglt2.org
[2026-03-14 21:57:23] apptainer works
[2026-03-14 21:57:23] Set ATHENA_PROC_NUMBER=12
[2026-03-14 21:57:23] Set ATHENA_CORE_NUMBER=12
[2026-03-14 21:57:23] Starting ATLAS job with PandaID=7055262354
[2026-03-14 21:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 23:05:06]  *** The last 200 lines of the pilot log: ***
[2026-03-14 23:05:06]  guid=56dadf58-8e7b-49d5-908b-8a0a0785a80c
[2026-03-14 23:05:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 23:05:06]  is_altstaged=None
[2026-03-14 23:05:06]  is_tar=False
[2026-03-14 23:05:06]  lfn=log.48955010._052016.job.log.tgz.1
[2026-03-14 23:05:06]  mtime=0
[2026-03-14 23:05:06]  protocol_id=None
[2026-03-14 23:05:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 23:05:06]  replicas=None
[2026-03-14 23:05:06]  scope=mc23_13p6TeV
[2026-03-14 23:05:06]  status=None
[2026-03-14 23:05:06]  status_code=0
[2026-03-14 23:05:06]  storage_token=
[2026-03-14 23:05:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7055262354/log.48955010._052016.job.log.tgz.1
[2026-03-14 23:05:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/76/log.48955010._052016.job.log.tgz.1
[2026-03-14 23:05:06]  workdir=None
[2026-03-14 23:05:06] ]
[2026-03-14 23:05:06] 2026-03-15 03:04:31,802 | INFO     | transferring file log.48955010._052016.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7055262354/log.48955010._052016.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 23:05:06] 2026-03-15 03:04:31,802 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7055262354/log.48955010._052016.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._052016.job
[2026-03-14 23:05:06] 2026-03-15 03:04:31,823 | INFO     | adding to output.list: log.48955010._052016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/76/log.48955010._052016.job.log.tg
[2026-03-14 23:05:06] 2026-03-15 03:04:31,824 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 23:05:06] 2026-03-15 03:04:31,825 | INFO     | summary of transferred files:
[2026-03-14 23:05:06] 2026-03-15 03:04:31,825 | INFO     |  -- lfn=log.48955010._052016.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 23:05:06] 2026-03-15 03:04:31,825 | INFO     | stage-out finished correctly
[2026-03-14 23:05:06] 2026-03-15 03:04:31,908 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 23:05:06] 2026-03-15 03:04:32,802 | INFO     | time since job start (4008s) is within the limit (345600.0s)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,119 | INFO     | job 7055262354 has state=finished
[2026-03-14 23:05:06] 2026-03-15 03:04:33,120 | INFO     | preparing for final server update for job 7055262354 in state='finished'
[2026-03-14 23:05:06] 2026-03-15 03:04:33,120 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7055262354/jobReport.json
[2026-03-14 23:05:06] 2026-03-15 03:04:33,123 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 23:05:06] 2026-03-15 03:04:33,124 | INFO     | this job has now completed (state=finished)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,124 | INFO     | log transfer has been attempted: DONE
[2026-03-14 23:05:06] 2026-03-15 03:04:33,124 | INFO     | job 7055262354 has finished - writing final server update
[2026-03-14 23:05:06] 2026-03-15 03:04:33,125 | INFO     | total number of processed events: 400 (read)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,127 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7055262354/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,128 | INFO     | extracted standard info from prmon json
[2026-03-14 23:05:06] 2026-03-15 03:04:33,128 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 23:05:06] 2026-03-15 03:04:33,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 23:05:06] 2026-03-15 03:04:33,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 23:05:06] 2026-03-15 03:04:33,129 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 23:05:06] 2026-03-15 03:04:33,130 | INFO     | fitting pss+swap vs Time
[2026-03-14 23:05:06] 2026-03-15 03:04:33,130 | INFO     | sum of square deviations: 63666310.0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,131 | INFO     | sum of deviations: -4220024164.0000005
[2026-03-14 23:05:06] 2026-03-15 03:04:33,131 | INFO     | mean x: 1773541962.0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,131 | INFO     | mean y: 2729019.372881356
[2026-03-14 23:05:06] 2026-03-15 03:04:33,131 | INFO     | intersect: 117559250443.46625
[2026-03-14 23:05:06] 2026-03-15 03:04:33,131 | INFO     | chi2: 0.04803066960906604
[2026-03-14 23:05:06] 2026-03-15 03:04:33,131 | INFO     | current memory leak: -66.28 B/s (using 59 data points, chi2=0.05)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | ..............................
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | . Timing measurements:
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | . get job = 0 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | . initial setup = 7 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | . payload setup = 7 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | . stage-in = 0 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,132 | INFO     | . payload execution = 3983 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,133 | INFO     | . stage-out = 0 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,133 | INFO     | . log creation = 0 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,133 | INFO     | ..............................
[2026-03-14 23:05:06] 2026-03-15 03:04:33,211 | INFO     | 
[2026-03-14 23:05:06] 2026-03-15 03:04:33,211 | INFO     | job summary report
[2026-03-14 23:05:06] 2026-03-15 03:04:33,211 | INFO     | --------------------------------------------------
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | PanDA job id: 7055262354
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | task id: 48955010
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | errors: (none)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | pilot state: finished 
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | transexitcode: 0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,212 | INFO     | exeerrorcode: 0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,213 | INFO     | exeerrordiag: 
[2026-03-14 23:05:06] 2026-03-15 03:04:33,213 | INFO     | exitcode: 0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,213 | INFO     | exitmsg: OK
[2026-03-14 23:05:06] 2026-03-15 03:04:33,213 | INFO     | cpuconsumptiontime: 43254 s
[2026-03-14 23:05:06] 2026-03-15 03:04:33,213 | INFO     | nevents: 400
[2026-03-14 23:05:06] 2026-03-15 03:04:33,213 | INFO     | neventsw: 0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,214 | INFO     | pid: 7037
[2026-03-14 23:05:06] 2026-03-15 03:04:33,214 | INFO     | pgrp: 7037
[2026-03-14 23:05:06] 2026-03-15 03:04:33,214 | INFO     | corecount: 12
[2026-03-14 23:05:06] 2026-03-15 03:04:33,214 | INFO     | event service: False
[2026-03-14 23:05:06] 2026-03-15 03:04:33,214 | INFO     | sizes: {0: 2279639, 1: 2280156, 12: 2280156, 3994: 2305984, 3996: 2315038, 3997: 2315176}
[2026-03-14 23:05:06] 2026-03-15 03:04:33,214 | INFO     | --------------------------------------------------
[2026-03-14 23:05:06] 2026-03-15 03:04:33,215 | INFO     | 
[2026-03-14 23:05:06] 2026-03-15 03:04:33,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 23:05:06] 2026-03-15 03:04:33,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,241 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,241 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,244 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 23:05:06] 2026-03-15 03:04:33,244 | INFO     | job 7055262354 has completed (purged errors)
[2026-03-14 23:05:06] 2026-03-15 03:04:33,244 | INFO     | overall cleanup function is called
[2026-03-14 23:05:06] 2026-03-15 03:04:34,252 | INFO     | --- collectZombieJob: --- 10, [7037]
[2026-03-14 23:05:06] 2026-03-15 03:04:34,253 | INFO     | zombie collector waiting for pid 7037
[2026-03-14 23:05:06] 2026-03-15 03:04:34,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 23:05:06] 2026-03-15 03:04:34,253 | INFO     | collected zombie processes
[2026-03-14 23:05:06] 2026-03-15 03:04:34,253 | INFO     | will attempt to kill all subprocesses of pid=7037
[2026-03-14 23:05:06] 2026-03-15 03:04:34,340 | INFO     | process IDs to be killed: [7037] (in reverse order)
[2026-03-14 23:05:06] 2026-03-15 03:04:34,391 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 23:05:06] 2026-03-15 03:04:34,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 23:05:06] 2026-03-15 03:04:34,395 | INFO     | did not find any defunct processes belonging to 7037
[2026-03-14 23:05:06] 2026-03-15 03:04:34,398 | INFO     | did not find any defunct processes belonging to 7037
[2026-03-14 23:05:06] 2026-03-15 03:04:34,398 | INFO     | ready for new job
[2026-03-14 23:05:06] 2026-03-15 03:04:34,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 23:05:06] 2026-03-15 03:04:34,400 | INFO     | **************************************
[2026-03-14 23:05:06] 2026-03-15 03:04:34,400 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 23:05:06] 2026-03-15 03:04:34,400 | INFO     | **************************************
[2026-03-14 23:05:06] 2026-03-15 03:04:34,400 | INFO     | 
[2026-03-14 23:05:06] 2026-03-15 03:04:34,401 | INFO     | architecture information:
[2026-03-14 23:05:06] 2026-03-15 03:04:34,401 | INFO     | executing command: cat /etc/os-release
[2026-03-14 23:05:06] 2026-03-15 03:04:34,416 | INFO     | cat /etc/os-release:
[2026-03-14 23:05:06] NAME="CentOS Linux"
[2026-03-14 23:05:06] VERSION="7 (Core)"
[2026-03-14 23:05:06] ID="centos"
[2026-03-14 23:05:06] ID_LIKE="rhel fedora"
[2026-03-14 23:05:06] VERSION_ID="7"
[2026-03-14 23:05:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 23:05:06] ANSI_COLOR="0;31"
[2026-03-14 23:05:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 23:05:06] HOME_URL="https://www.centos.org/"
[2026-03-14 23:05:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 23:05:06] 
[2026-03-14 23:05:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 23:05:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 23:05:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 23:05:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 23:05:06] 
[2026-03-14 23:05:06] 2026-03-15 03:04:34,416 | INFO     | **************************************
[2026-03-14 23:05:06] 2026-03-15 03:04:34,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 23:05:06] 2026-03-15 03:04:34,935 | INFO     | sufficient remaining disk space (28894560256 B)
[2026-03-14 23:05:06] 2026-03-15 03:04:34,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 23:05:06] 2026-03-15 03:04:34,935 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 23:05:06] 2026-03-15 03:04:34,935 | INFO     | update_server=False
[2026-03-14 23:05:06] 2026-03-15 03:04:34,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 23:05:06] 2026-03-15 03:04:34,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 23:05:06] 2026-03-15 03:04:34,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:05:06] 2026-03-15 03:04:35,582 | INFO     | all payload control threads have been joined
[2026-03-14 23:05:06] 2026-03-15 03:04:35,839 | WARNING  | process 7037 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 23:05:06] 2026-03-15 03:04:35,910 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:05:06] 2026-03-15 03:04:35,924 | INFO     | all data control threads have been joined
[2026-03-14 23:05:06] 2026-03-15 03:04:35,941 | INFO     | [job] retrieve thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:35,942 | INFO     | [job] queue monitor thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:35,996 | INFO     | number of running child processes to parent process 7037: 1
[2026-03-14 23:05:06] 2026-03-15 03:04:35,996 | INFO     | maximum number of monitored processes: 6
[2026-03-14 23:05:06] 2026-03-15 03:04:35,996 | INFO     | aborting job monitoring since job object (job id=7055262354) has expired
[2026-03-14 23:05:06] 2026-03-15 03:04:35,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:05:06] 2026-03-15 03:04:35,996 | INFO     | will abort loop
[2026-03-14 23:05:06] 2026-03-15 03:04:36,232 | INFO     | all job control threads have been joined
[2026-03-14 23:05:06] 2026-03-15 03:04:36,588 | INFO     | [payload] control thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:36,719 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:36,871 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:36,888 | INFO     | [job] validate thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:36,892 | INFO     | [payload] failed_post thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:36,927 | INFO     | [data] control thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:36,942 | INFO     | [data] copytool_out thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:37,002 | INFO     | [job] job monitor thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:37,032 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:37,239 | INFO     | [job] control thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:37,433 | INFO     | [data] copytool_in thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:37,464 | INFO     | [payload] validate_post thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:37,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 23:05:06] 2026-03-15 03:04:41,999 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:45,136 | INFO     | job.realtimelogging is not enabled
[2026-03-14 23:05:06] 2026-03-15 03:04:46,142 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 23:05:06] 2026-03-15 03:04:50,066 | INFO     | [monitor] cgroup control has ended
[2026-03-14 23:05:06] 2026-03-15 03:04:50,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139772669441856)>', '<ExcThread(monitor, started 139771691120384)>']
[2026-03-14 23:05:06] 2026-03-15 03:04:55,570 | INFO     | all workflow threads have been joined
[2026-03-14 23:05:06] 2026-03-15 03:04:55,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 23:05:06] 2026-03-15 03:04:55,570 | INFO     | traces error code: 0
[2026-03-14 23:05:06] 2026-03-15 03:04:55,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 23:05:06] 2026-03-15 03:05:06,010 | INFO     | PID=2566 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 23:05:06] 2026-03-15 03:05:06,011 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 23:05:06] 2026-03-15 03:05:06,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 23:05:06] 2026-03-15 03:05:06,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 23:05:06] 2026-03-15 03:05:06,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 23:05:06] 2026-03-15 03:05:06,011 | INFO     | [monitor] control thread has ended
[2026-03-14 23:05:06] 2026-03-15 03:05:06,104 [wrapper] ==== pilot stdout END ====
[2026-03-14 23:05:06] 2026-03-15 03:05:06,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 23:05:06] 2026-03-15 03:05:06,111 [wrapper] pilotpid: 2566
[2026-03-14 23:05:06] 2026-03-15 03:05:06,114 [wrapper] Pilot exit status: 0
[2026-03-14 23:05:06] 2026-03-15 03:05:06,128 [wrapper] pandaids: 7055262354
[2026-03-14 23:05:06] 2026-03-15 03:05:06,165 [wrapper] cleanup supervisor_pilot 25578 2567
[2026-03-14 23:05:06] 2026-03-15 03:05:06,169 [wrapper] Test setup, not cleaning
[2026-03-14 23:05:06] 2026-03-15 03:05:06,173 [wrapper] apfmon messages muted
[2026-03-14 23:05:06] 2026-03-15 03:05:06,177 [wrapper] ==== wrapper stdout END ====
[2026-03-14 23:05:06] 2026-03-15 03:05:06,180 [wrapper] ==== wrapper stderr END ====
[2026-03-14 23:05:06]  *** Error codes and diagnostics ***
[2026-03-14 23:05:06]     "exeErrorCode": 0,
[2026-03-14 23:05:06]     "exeErrorDiag": "",
[2026-03-14 23:05:06]     "pilotErrorCode": 0,
[2026-03-14 23:05:06]     "pilotErrorDiag": "",
[2026-03-14 23:05:06]  *** Listing of results directory ***
[2026-03-14 23:05:06] total 621288
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 17:44 pilot3.tar.gz
[2026-03-14 23:05:06] -rwx------ 1 boincer umatlas     36322 Mar 14 17:47 runpilot2-wrapper.sh
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 17:48 queuedata.json
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas       100 Mar 14 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 23:05:06] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 21:57 run_atlas
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas       105 Mar 14 21:57 job.xml
[2026-03-14 23:05:06] -rw-r--r-- 2 boincer umatlas 440066329 Mar 14 21:57 EVNT.46701403._001791.pool.root.1
[2026-03-14 23:05:06] drwxrwx--x 2 boincer umatlas      4096 Mar 14 21:57 shared
[2026-03-14 23:05:06] -rw-r--r-- 2 boincer umatlas    597532 Mar 14 21:57 input.tar.gz
[2026-03-14 23:05:06] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 21:57 start_atlas.sh
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas         0 Mar 14 21:57 boinc_lockfile
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas      2562 Mar 14 21:57 pandaJob.out
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas        57 Mar 14 21:57 setup.sh.local
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas   1006481 Mar 14 21:57 agis_schedconf.cvmfs.json
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas   1511579 Mar 14 21:57 agis_ddmendpoints.agis.ALL.json
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas       444 Mar 14 21:57 workernode_map.json
[2026-03-14 23:05:06] drwx------ 5 boincer umatlas      4096 Mar 14 21:57 pilot3
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 23:00 init_data.xml
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas 190266166 Mar 14 23:04 HITS.48955010._052016.pool.root.1
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas       530 Mar 14 23:04 boinc_task_state.xml
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas      1058 Mar 14 23:04 memory_monitor_summary.json
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas    375599 Mar 14 23:04 log.48955010._052016.job.log.tgz.1
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas        95 Mar 14 23:04 pilot_heartbeat.json
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas      6413 Mar 14 23:04 heartbeat.json
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas        27 Mar 14 23:05 wrapper_checkpoint.txt
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 23:05 boinc_mmap_file
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas       744 Mar 14 23:05 pilotlog.txt
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas    588841 Mar 14 23:05 log.48955010._052016.job.log.1
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas       357 Mar 14 23:05 output.list
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas       620 Mar 14 23:05 runtime_log
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas    983040 Mar 14 23:05 result.tar.gz
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 23:05 runtime_log.err
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas       658 Mar 14 23:05 egDNDmr0lL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1guLDmbikfKo.diag
[2026-03-14 23:05:06] -rw-r--r-- 1 boincer umatlas     21346 Mar 14 23:05 stderr.txt
[2026-03-14 23:05:06] HITS file was successfully produced:
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas 190266166 Mar 14 23:04 shared/HITS.pool.root.1
[2026-03-14 23:05:06]  *** Contents of shared directory: ***
[2026-03-14 23:05:06] total 617132
[2026-03-14 23:05:06] -rw-r--r-- 2 boincer umatlas 440066329 Mar 14 21:57 ATLAS.root_0
[2026-03-14 23:05:06] -rw-r--r-- 2 boincer umatlas    597532 Mar 14 21:57 input.tar.gz
[2026-03-14 23:05:06] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 21:57 start_atlas.sh
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas 190266166 Mar 14 23:04 HITS.pool.root.1
[2026-03-14 23:05:06] -rw------- 1 boincer umatlas    983040 Mar 14 23:05 result.tar.gz
23:05:08 (30881): run_atlas exited; CPU time 43241.791546
23:05:08 (30881): called boinc_finish(0)

</stderr_txt>
]]>

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