Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:57 (4183129): wrapper (7.7.26015): starting
03:32:57 (4183129): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 03:32:57] Arguments: --nthreads 4
[2026-03-16 03:32:57] Threads: 4
[2026-03-16 03:32:57] Checking for CVMFS
[2026-03-16 03:32:57] No cvmfs_config command found, will try listing directly
[2026-03-16 03:32:57] CVMFS is ok
[2026-03-16 03:32:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 03:32:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 03:32:57] Further information can be found at the LHC@home message board.
[2026-03-16 03:32:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 03:32:57] Checking for apptainer binary...
[2026-03-16 03:32:57] which: no apptainer in ((null))
[2026-03-16 03:32:57] apptainer is not installed, using version from CVMFS
[2026-03-16 03:32:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 03:32:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-03-16 03:32:57] apptainer works
[2026-03-16 03:32:57] Set ATHENA_PROC_NUMBER=4
[2026-03-16 03:32:57] Set ATHENA_CORE_NUMBER=4
[2026-03-16 03:32:57] Starting ATLAS job with PandaID=7055231382
[2026-03-16 03:32:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 07:08:39]  *** The last 200 lines of the pilot log: ***
[2026-03-16 07:08:39] 2026-03-16 06:07:38,754 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 07:08:39] 2026-03-16 06:07:38,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 07:08:39] 2026-03-16 06:07:38,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 07:08:39] 2026-03-16 06:07:38,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 07:08:39] 2026-03-16 06:07:38,759 | INFO     | fitting pss+swap vs Time
[2026-03-16 07:08:39] 2026-03-16 06:07:38,759 | INFO     | sum of square deviations: 2912836010.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,760 | INFO     | sum of deviations: 10746872456.999996
[2026-03-16 07:08:39] 2026-03-16 06:07:38,761 | INFO     | mean x: 1773634821.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,761 | INFO     | mean y: 2305450.6113744075
[2026-03-16 07:08:39] 2026-03-16 06:07:38,761 | INFO     | intersect: -6541498299.803334
[2026-03-16 07:08:39] 2026-03-16 06:07:38,761 | INFO     | chi2: 2.1342648427943103
[2026-03-16 07:08:39] 2026-03-16 06:07:38,762 | INFO     | sum of square deviations: 2710627567.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,763 | INFO     | sum of deviations: 23593494813.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,763 | INFO     | mean x: 1773634668.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,763 | INFO     | mean y: 2314947.024271845
[2026-03-16 07:08:39] 2026-03-16 06:07:38,763 | INFO     | intersect: -15435527143.135368
[2026-03-16 07:08:39] 2026-03-16 06:07:38,764 | INFO     | chi2: 1.3271166530743759
[2026-03-16 07:08:39] 2026-03-16 06:07:38,764 | INFO     | current chi2=1.3271166530743759 (change=37.8185581065547 %)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,764 | INFO     | sum of square deviations: 2518000700.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,765 | INFO     | sum of deviations: 22935966816.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,766 | INFO     | mean x: 1773634516.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,766 | INFO     | mean y: 2314426.368159204
[2026-03-16 07:08:39] 2026-03-16 06:07:38,766 | INFO     | intersect: -16153369089.799341
[2026-03-16 07:08:39] 2026-03-16 06:07:38,766 | INFO     | chi2: 1.3278573891518675
[2026-03-16 07:08:39] 2026-03-16 06:07:38,766 | INFO     | current chi2=1.3278573891518675 (change=-0.0558154458973604 %)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,766 | INFO     | right removable region: 200
[2026-03-16 07:08:39] 2026-03-16 06:07:38,767 | INFO     | sum of square deviations: 2710627567.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,768 | INFO     | sum of deviations: -16569330722.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,768 | INFO     | mean x: 1773634973.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,768 | INFO     | mean y: 2325811.995145631
[2026-03-16 07:08:39] 2026-03-16 06:07:38,768 | INFO     | intersect: 10844075084.108688
[2026-03-16 07:08:39] 2026-03-16 06:07:38,769 | INFO     | chi2: 0.8319853957016821
[2026-03-16 07:08:39] 2026-03-16 06:07:38,769 | INFO     | current chi2=0.8319853957016821 (change=61.017706002578585 %)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,769 | INFO     | sum of square deviations: 2518000700.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | sum of deviations: -15626307841.000006
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | mean x: 1773635126.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | mean y: 2325066.3482587063
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | intersect: 11009219733.409643
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | chi2: 0.8321664465516198
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | current chi2=0.8321664465516198 (change=-0.021761301445080844 %)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,771 | INFO     | left removable region: 20
[2026-03-16 07:08:39] 2026-03-16 06:07:38,772 | INFO     | sum of square deviations: 1808350185.0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,773 | INFO     | sum of deviations: -1556083312.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,773 | INFO     | mean x: 1773635095.5
[2026-03-16 07:08:39] 2026-03-16 06:07:38,773 | INFO     | mean y: 2334344.4055555556
[2026-03-16 07:08:39] 2026-03-16 06:07:38,773 | INFO     | intersect: 1528545361.2014499
[2026-03-16 07:08:39] 2026-03-16 06:07:38,773 | INFO     | chi2: 0.00479659876542167
[2026-03-16 07:08:39] 2026-03-16 06:07:38,774 | INFO     | current memory leak: -0.86 B/s (using 180 data points, chi2=0.00)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,774 | INFO     | could have reported an average CPU frequency of 2545 MHz (11 samples)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,774 | INFO     | ..............................
[2026-03-16 07:08:39] 2026-03-16 06:07:38,774 | INFO     | . Timing measurements:
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . get job = 0 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . initial setup = 5 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . payload setup = 5 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . stage-in = 0 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . payload execution = 12845 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . stage-out = 1 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | . log creation = 0 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,775 | INFO     | ..............................
[2026-03-16 07:08:39] 2026-03-16 06:07:38,871 | INFO     | 
[2026-03-16 07:08:39] 2026-03-16 06:07:38,871 | INFO     | job summary report
[2026-03-16 07:08:39] 2026-03-16 06:07:38,871 | INFO     | --------------------------------------------------
[2026-03-16 07:08:39] 2026-03-16 06:07:38,871 | INFO     | PanDA job id: 7055231382
[2026-03-16 07:08:39] 2026-03-16 06:07:38,871 | INFO     | task id: 48967094
[2026-03-16 07:08:39] 2026-03-16 06:07:38,871 | INFO     | errors: (none)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | pilot state: finished 
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | transexitcode: 0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | exeerrorcode: 0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | exeerrordiag: 
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | exitcode: 0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | exitmsg: OK
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | cpuconsumptiontime: 49981 s
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | nevents: 400
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | neventsw: 0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | pid: 6571
[2026-03-16 07:08:39] 2026-03-16 06:07:38,872 | INFO     | pgrp: 6571
[2026-03-16 07:08:39] 2026-03-16 06:07:38,873 | INFO     | corecount: 4
[2026-03-16 07:08:39] 2026-03-16 06:07:38,873 | INFO     | event service: False
[2026-03-16 07:08:39] 2026-03-16 06:07:38,873 | INFO     | sizes: {0: 2279747, 1: 2280264, 12: 2280264, 12851: 2310346, 12853: 2319366, 12854: 2319744}
[2026-03-16 07:08:39] 2026-03-16 06:07:38,873 | INFO     | --------------------------------------------------
[2026-03-16 07:08:39] 2026-03-16 06:07:38,873 | INFO     | 
[2026-03-16 07:08:39] 2026-03-16 06:07:38,873 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/0
[2026-03-16 07:08:39] 2026-03-16 06:07:38,896 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,896 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | job 7055231382 has completed (purged errors)
[2026-03-16 07:08:39] 2026-03-16 06:07:38,898 | INFO     | overall cleanup function is called
[2026-03-16 07:08:39] 2026-03-16 06:07:39,906 | INFO     | --- collectZombieJob: --- 10, [6571]
[2026-03-16 07:08:39] 2026-03-16 06:07:39,907 | INFO     | zombie collector waiting for pid 6571
[2026-03-16 07:08:39] 2026-03-16 06:07:39,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 07:08:39] 2026-03-16 06:07:39,907 | INFO     | collected zombie processes
[2026-03-16 07:08:39] 2026-03-16 06:07:39,907 | INFO     | will attempt to kill all subprocesses of pid=6571
[2026-03-16 07:08:39] 2026-03-16 06:07:40,798 | INFO     | process IDs to be killed: [6571] (in reverse order)
[2026-03-16 07:08:39] 2026-03-16 06:07:40,881 | WARNING  | process 6571 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 07:08:39] 2026-03-16 06:07:40,916 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 07:08:39] 2026-03-16 06:07:40,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 07:08:39] 2026-03-16 06:07:40,946 | INFO     | did not find any defunct processes belonging to 6571
[2026-03-16 07:08:39] 2026-03-16 06:07:40,976 | INFO     | did not find any defunct processes belonging to 6571
[2026-03-16 07:08:39] 2026-03-16 06:07:40,976 | INFO     | ready for new job
[2026-03-16 07:08:39] 2026-03-16 06:07:40,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 07:08:39] 2026-03-16 06:07:40,979 | INFO     | **************************************
[2026-03-16 07:08:39] 2026-03-16 06:07:40,979 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 07:08:39] 2026-03-16 06:07:40,979 | INFO     | **************************************
[2026-03-16 07:08:39] 2026-03-16 06:07:40,979 | INFO     | 
[2026-03-16 07:08:39] 2026-03-16 06:07:40,984 | INFO     | architecture information:
[2026-03-16 07:08:39] 2026-03-16 06:07:40,984 | INFO     | executing command: cat /etc/os-release
[2026-03-16 07:08:39] 2026-03-16 06:07:41,001 | INFO     | cat /etc/os-release:
[2026-03-16 07:08:39] NAME="CentOS Linux"
[2026-03-16 07:08:39] VERSION="7 (Core)"
[2026-03-16 07:08:39] ID="centos"
[2026-03-16 07:08:39] ID_LIKE="rhel fedora"
[2026-03-16 07:08:39] VERSION_ID="7"
[2026-03-16 07:08:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 07:08:39] ANSI_COLOR="0;31"
[2026-03-16 07:08:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 07:08:39] HOME_URL="https://www.centos.org/"
[2026-03-16 07:08:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 07:08:39] 
[2026-03-16 07:08:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 07:08:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 07:08:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 07:08:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 07:08:39] 
[2026-03-16 07:08:39] 2026-03-16 06:07:41,001 | INFO     | **************************************
[2026-03-16 07:08:39] 2026-03-16 06:07:41,230 | INFO     | using path: /var/lib/boinc/var/slot28/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 07:08:39] 2026-03-16 06:07:41,504 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/0
[2026-03-16 07:08:39] 2026-03-16 06:07:41,523 | INFO     | sufficient remaining disk space (54330916864 B)
[2026-03-16 07:08:39] 2026-03-16 06:07:41,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 07:08:39] 2026-03-16 06:07:41,524 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 07:08:39] 2026-03-16 06:07:41,524 | INFO     | update_server=False
[2026-03-16 07:08:39] 2026-03-16 06:07:41,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 07:08:39] 2026-03-16 06:07:41,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 07:08:39] 2026-03-16 06:07:41,594 | INFO     | number of running child processes to parent process 6571: 1
[2026-03-16 07:08:39] 2026-03-16 06:07:41,594 | INFO     | maximum number of monitored processes: 6
[2026-03-16 07:08:39] 2026-03-16 06:07:41,594 | INFO     | aborting job monitoring since job object (job id=7055231382) has expired
[2026-03-16 07:08:39] 2026-03-16 06:07:41,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 07:08:39] 2026-03-16 06:07:41,594 | INFO     | will abort loop
[2026-03-16 07:08:39] 2026-03-16 06:07:41,946 | INFO     | all data control threads have been joined
[2026-03-16 07:08:39] 2026-03-16 06:07:42,143 | INFO     | all payload control threads have been joined
[2026-03-16 07:08:39] 2026-03-16 06:07:42,529 | INFO     | [job] retrieve thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:42,600 | INFO     | [job] job monitor thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:42,631 | INFO     | [job] validate thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:42,756 | INFO     | all job control threads have been joined
[2026-03-16 07:08:39] 2026-03-16 06:07:42,948 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:42,952 | INFO     | [data] control thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,133 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,148 | INFO     | [payload] control thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,264 | INFO     | [payload] failed_post thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,445 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,482 | INFO     | [data] copytool_in thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,529 | INFO     | [data] copytool_out thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,762 | INFO     | [job] control thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:43,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 07:08:39] 2026-03-16 06:07:43,948 | INFO     | [payload] validate_post thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:44,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 07:08:39] 2026-03-16 06:07:44,887 | INFO     | [job] queue monitor thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:48,747 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:07:51,614 | INFO     | job.realtimelogging is not enabled
[2026-03-16 07:08:39] 2026-03-16 06:07:52,620 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 07:08:39] 2026-03-16 06:08:10,390 | INFO     | PID=4190384 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-16 07:08:39] 2026-03-16 06:08:10,390 | INFO     | .. there are 11 such processes running
[2026-03-16 07:08:39] 2026-03-16 06:08:10,391 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 07:08:39] 2026-03-16 06:08:10,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 07:08:39] 2026-03-16 06:08:10,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 07:08:39] 2026-03-16 06:08:33,016 | INFO     | [monitor] cgroup control has ended
[2026-03-16 07:08:39] 2026-03-16 06:08:33,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22432011421504)>', '<ExcThread(monitor, started 22431768250112)>']
[2026-03-16 07:08:39] 2026-03-16 06:08:34,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 07:08:39] 2026-03-16 06:08:34,486 | INFO     | [monitor] control thread has ended
[2026-03-16 07:08:39] 2026-03-16 06:08:38,902 | INFO     | all workflow threads have been joined
[2026-03-16 07:08:39] 2026-03-16 06:08:38,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 07:08:39] 2026-03-16 06:08:38,903 | INFO     | traces error code: 0
[2026-03-16 07:08:39] 2026-03-16 06:08:38,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 07:08:39] 2026-03-16 06:08:39,074 [wrapper] ==== pilot stdout END ====
[2026-03-16 07:08:39] 2026-03-16 06:08:39,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 07:08:39] 2026-03-16 06:08:39,080 [wrapper] pilotpid: 4190384
[2026-03-16 07:08:39] 2026-03-16 06:08:39,082 [wrapper] Pilot exit status: 0
[2026-03-16 07:08:39] 2026-03-16 06:08:39,093 [wrapper] pandaids: 7055231382
[2026-03-16 07:08:39] 2026-03-16 06:08:39,165 [wrapper] cleanup supervisor_pilot  280634 4190385
[2026-03-16 07:08:39] 2026-03-16 06:08:39,168 [wrapper] Test setup, not cleaning
[2026-03-16 07:08:39] 2026-03-16 06:08:39,171 [wrapper] apfmon messages muted
[2026-03-16 07:08:39] 2026-03-16 06:08:39,174 [wrapper] ==== wrapper stdout END ====
[2026-03-16 07:08:39] 2026-03-16 06:08:39,176 [wrapper] ==== wrapper stderr END ====
[2026-03-16 07:08:39]  *** Error codes and diagnostics ***
[2026-03-16 07:08:39]     "exeErrorCode": 0,
[2026-03-16 07:08:39]     "exeErrorDiag": "",
[2026-03-16 07:08:39]     "pilotErrorCode": 0,
[2026-03-16 07:08:39]     "pilotErrorDiag": "",
[2026-03-16 07:08:39]  *** Listing of results directory ***
[2026-03-16 07:08:39] total 427204
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 22:44 pilot3.tar.gz
[2026-03-16 07:08:39] -rwx------. 1 boinc boinc     36322 Mar 14 22:47 runpilot2-wrapper.sh
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 22:48 queuedata.json
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc       100 Mar 16 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 07:08:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 03:32 run_atlas
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc       105 Mar 16 03:32 job.xml
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc      6563 Mar 16 03:32 init_data.xml
[2026-03-16 07:08:39] -rw-r--r--. 2 boinc boinc 217494265 Mar 16 03:32 EVNT.48967092._000341.pool.root.1
[2026-03-16 07:08:39] -rw-r--r--. 2 boinc boinc     15845 Mar 16 03:32 start_atlas.sh
[2026-03-16 07:08:39] drwxrwx--x. 2 boinc boinc      4096 Mar 16 03:32 shared
[2026-03-16 07:08:39] -rw-r--r--. 2 boinc boinc    597538 Mar 16 03:32 input.tar.gz
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc         0 Mar 16 03:32 boinc_lockfile
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc      2598 Mar 16 03:32 pandaJob.out
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc   1006471 Mar 16 03:33 agis_schedconf.cvmfs.json
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc       448 Mar 16 03:33 workernode_map.json
[2026-03-16 07:08:39] drwx------. 5 boinc boinc      4096 Mar 16 03:33 pilot3
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc 211590957 Mar 16 07:06 HITS.48967094._008635.pool.root.1
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc       531 Mar 16 07:07 boinc_task_state.xml
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc      1033 Mar 16 07:07 memory_monitor_summary.json
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc   1511579 Mar 16 07:07 agis_ddmendpoints.agis.ALL.json
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc    399058 Mar 16 07:07 log.48967094._008635.job.log.tgz.1
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc      6398 Mar 16 07:07 heartbeat.json
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc        95 Mar 16 07:08 pilot_heartbeat.json
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc      8192 Mar 16 07:08 boinc_mmap_file
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc        28 Mar 16 07:08 wrapper_checkpoint.txt
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc      5317 Mar 16 07:08 pilotlog.txt
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc   1820463 Mar 16 07:08 log.48967094._008635.job.log.1
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc       357 Mar 16 07:08 output.list
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc       620 Mar 16 07:08 runtime_log
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc   2232320 Mar 16 07:08 result.tar.gz
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc      9205 Mar 16 07:08 runtime_log.err
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc       664 Mar 16 07:08 In2KDmS0lL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfcuLDmFoRF6n.diag
[2026-03-16 07:08:39] -rw-r--r--. 1 boinc boinc     20818 Mar 16 07:08 stderr.txt
[2026-03-16 07:08:39] HITS file was successfully produced:
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc 211590957 Mar 16 07:06 shared/HITS.pool.root.1
[2026-03-16 07:08:39]  *** Contents of shared directory: ***
[2026-03-16 07:08:39] total 421820
[2026-03-16 07:08:39] -rw-r--r--. 2 boinc boinc 217494265 Mar 16 03:32 ATLAS.root_0
[2026-03-16 07:08:39] -rw-r--r--. 2 boinc boinc     15845 Mar 16 03:32 start_atlas.sh
[2026-03-16 07:08:39] -rw-r--r--. 2 boinc boinc    597538 Mar 16 03:32 input.tar.gz
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc 211590957 Mar 16 07:06 HITS.pool.root.1
[2026-03-16 07:08:39] -rw-------. 1 boinc boinc   2232320 Mar 16 07:08 result.tar.gz
07:08:40 (4183129): run_atlas exited; CPU time 50480.823449
07:08:40 (4183129): called boinc_finish(0)

</stderr_txt>
]]>

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