Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:35:29 (805693): wrapper (7.7.26015): starting
18:35:29 (805693): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 18:35:29] Arguments: --nthreads 12
[2026-03-14 18:35:29] Threads: 12
[2026-03-14 18:35:29] Checking for CVMFS
[2026-03-14 18:35:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:35:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:35:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:35:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:35:30] 2.11.5.0 2451234 184393 257544 157297 0 271 38734450 45568000 15311 130560 0 1675707041 99.815 925051762 21632 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-14 18:35:30] CVMFS is ok
[2026-03-14 18:35:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:35:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:35:30] Further information can be found at the LHC@home message board.
[2026-03-14 18:35:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:35:30] Checking for apptainer binary...
[2026-03-14 18:35:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:35:30] Running /usr/bin/apptainer --version
[2026-03-14 18:35:30] apptainer version 1.4.1-1.el9
[2026-03-14 18:35:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:35:31] wns0065.triumf.lcg
[2026-03-14 18:35:31] apptainer works
[2026-03-14 18:35:31] Set ATHENA_PROC_NUMBER=12
[2026-03-14 18:35:31] Set ATHENA_CORE_NUMBER=12
[2026-03-14 18:35:31] Starting ATLAS job with PandaID=7055232252
[2026-03-14 18:35:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:40:27]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | wrong length of table data, x=[1773538633.0], y=[2109.0] (must be same and length>=4)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | INFO     | could have reported an average CPU frequency of 2640 MHz (4 samples)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | ..............................
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . Timing measurements:
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . get job = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . initial setup = 21 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . payload setup = 25 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . stage-in = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . payload execution = 40 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . stage-out = 1 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . log creation = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | ..............................
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7055232252/pilotlog.txt
[2026-03-14 18:40:27] 2026-03-15 01:39:40,950 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-14 18:40:27] - Log from pilotlog.txt -
[2026-03-14 18:40:27] 2026-03-15 01:39:40,830 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7055232252/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | INFO     | extracted standard info from prmon json
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | wrong length of table data, x=[1773538633.0], y=[2109.0] (must be same and length>=4)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | INFO     | could have reported an average CPU frequency of 2640 MHz (4 samples)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | ..............................
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . Timing measurements:
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . get job = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . initial setup = 21 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . payload setup = 25 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . stage-in = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . payload execution = 40 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . stage-out = 1 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . log creation = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | ..............................
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7055232252/pilotlog.txt
[2026-03-14 18:40:27] 2026-03-15 01:39:40,950 | WARNING  | 
[2026-03-14 18:40:27] [begin log extracts]
[2026-03-14 18:40:27] - Log from pilotlog.txt -
[2026-03-14 18:40:27] 2026-03-15 01:39:40,830 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7055232252/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | INFO     | extracted standard info from prmon json
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:40:27] 2026-03-15 01:39:40,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | WARNING  | wrong length of table data, x=[1773538633.0], y=[2109.0] (must be same and length>=4)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,849 | INFO     | could have reported an average CPU frequency of 2640 MHz (4 samples)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | ..............................
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . Timing measurements:
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . get job = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . initial setup = 21 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . payload setup = 25 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . stage-in = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . payload execution = 40 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . stage-out = 1 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | . log creation = 0 s
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | ..............................
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 18:40:27] 2026-03-15 01:39:40,850 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7055232252/pilotlog.txt
[2026-03-14 18:40:27] [end log extracts]
[2026-03-14 18:40:27] 2026-03-15 01:39:40,950 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-14 18:40:27] 2026-03-15 01:39:40,951 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | 
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | job summary report
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | --------------------------------------------------
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | PanDA job id: 7055232252
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | task id: 48967094
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-14 18:37:33,881 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | pilot state: failed 
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | transexitcode: 65
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | exeerrorcode: 65
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | exitcode: 65
[2026-03-14 18:40:27] 2026-03-15 01:39:41,058 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | cpuconsumptiontime: 13 s
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | nevents: 0
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | neventsw: 0
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | pid: 814006
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | pgrp: 814006
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | corecount: 12
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | event service: False
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | sizes: {0: 2279844, 1: 2280248, 11: 2280248, 71: 2303535, 72: 2303511, 73: 2307987, 189: 2308125}
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | --------------------------------------------------
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | 
[2026-03-14 18:40:27] 2026-03-15 01:39:41,059 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-14 18:40:27] 2026-03-15 01:39:41,075 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,075 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,075 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 18:40:27] 2026-03-15 01:39:41,076 | INFO     | job 7055232252 has completed (purged errors)
[2026-03-14 18:40:27] 2026-03-15 01:39:41,077 | INFO     | overall cleanup function is called
[2026-03-14 18:40:27] 2026-03-15 01:39:42,084 | INFO     | --- collectZombieJob: --- 10, [814006]
[2026-03-14 18:40:27] 2026-03-15 01:39:42,084 | INFO     | zombie collector waiting for pid 814006
[2026-03-14 18:40:27] 2026-03-15 01:39:42,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 18:40:27] 2026-03-15 01:39:42,084 | INFO     | collected zombie processes
[2026-03-14 18:40:27] 2026-03-15 01:39:42,084 | INFO     | will attempt to kill all subprocesses of pid=814006
[2026-03-14 18:40:27] 2026-03-15 01:39:42,881 | INFO     | process IDs to be killed: [814006] (in reverse order)
[2026-03-14 18:40:27] 2026-03-15 01:39:43,035 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 18:40:27] 2026-03-15 01:39:43,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 18:40:27] 2026-03-15 01:39:43,085 | INFO     | did not find any defunct processes belonging to 814006
[2026-03-14 18:40:27] 2026-03-15 01:39:43,139 | INFO     | did not find any defunct processes belonging to 814006
[2026-03-14 18:40:27] 2026-03-15 01:39:43,146 | INFO     | ready for new job
[2026-03-14 18:40:27] 2026-03-15 01:39:43,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 18:40:27] 2026-03-15 01:39:43,147 | INFO     | **************************************
[2026-03-14 18:40:27] 2026-03-15 01:39:43,148 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 18:40:27] 2026-03-15 01:39:43,148 | INFO     | **************************************
[2026-03-14 18:40:27] 2026-03-15 01:39:43,148 | INFO     | 
[2026-03-14 18:40:27] 2026-03-15 01:39:43,150 | INFO     | architecture information:
[2026-03-14 18:40:27] 2026-03-15 01:39:43,164 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:40:27] 2026-03-15 01:39:43,318 | INFO     | cat /etc/os-release:
[2026-03-14 18:40:27] NAME="CentOS Linux"
[2026-03-14 18:40:27] VERSION="7 (Core)"
[2026-03-14 18:40:27] ID="centos"
[2026-03-14 18:40:27] ID_LIKE="rhel fedora"
[2026-03-14 18:40:27] VERSION_ID="7"
[2026-03-14 18:40:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:40:27] ANSI_COLOR="0;31"
[2026-03-14 18:40:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:40:27] HOME_URL="https://www.centos.org/"
[2026-03-14 18:40:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:40:27] 
[2026-03-14 18:40:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:40:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:40:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:40:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:40:27] 
[2026-03-14 18:40:27] 2026-03-15 01:39:43,318 | INFO     | **************************************
[2026-03-14 18:40:27] 2026-03-15 01:39:43,822 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-14 18:40:27] 2026-03-15 01:39:43,895 | INFO     | sufficient remaining disk space (2057506390016 B)
[2026-03-14 18:40:27] 2026-03-15 01:39:43,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:40:27] 2026-03-15 01:39:43,895 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:40:27] 2026-03-15 01:39:43,895 | INFO     | update_server=False
[2026-03-14 18:40:27] 2026-03-15 01:39:43,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:40:27] 2026-03-15 01:39:43,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:40:27] 2026-03-15 01:39:44,033 | INFO     | all payload control threads have been joined
[2026-03-14 18:40:27] 2026-03-15 01:39:44,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:40:27] 2026-03-15 01:39:44,414 | INFO     | all data control threads have been joined
[2026-03-14 18:40:27] 2026-03-15 01:39:44,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:40:27] 2026-03-15 01:39:44,785 | INFO     | aborting loop
[2026-03-14 18:40:27] 2026-03-15 01:39:44,902 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,039 | INFO     | [payload] control thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,245 | INFO     | all job control threads have been joined
[2026-03-14 18:40:27] 2026-03-15 01:39:45,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,308 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,420 | INFO     | [data] control thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,791 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,792 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,864 | INFO     | [job] validate thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:45,908 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:46,023 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:46,057 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:46,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:40:27] 2026-03-15 01:39:46,251 | INFO     | [job] control thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:46,321 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:46,341 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:47,096 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:39:48,191 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:40:27] 2026-03-15 01:40:13,709 | INFO     | PID=809393 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 18:40:27] 2026-03-15 01:40:13,716 | INFO     | .. there are 21 such processes running
[2026-03-14 18:40:27] 2026-03-15 01:40:13,717 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:40:27] 2026-03-15 01:40:13,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:40:27] 2026-03-15 01:40:13,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:40:27] 2026-03-15 01:40:21,025 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:40:27] 2026-03-15 01:40:22,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020036835136)>', '<ExcThread(monitor, started 140019717084928)>']
[2026-03-14 18:40:27] 2026-03-15 01:40:22,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:40:27] 2026-03-15 01:40:22,771 | INFO     | [monitor] control thread has ended
[2026-03-14 18:40:27] 2026-03-15 01:40:27,339 | INFO     | all workflow threads have been joined
[2026-03-14 18:40:27] 2026-03-15 01:40:27,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:40:27] 2026-03-15 01:40:27,339 | INFO     | traces error code: 0
[2026-03-14 18:40:27] 2026-03-15 01:40:27,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:40:27] 2026-03-15 01:40:27,465 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:40:27] 2026-03-15 01:40:27,466 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:40:27] 2026-03-15 01:40:27,468 [wrapper] pilotpid: 809393
[2026-03-14 18:40:27] 2026-03-15 01:40:27,470 [wrapper] Pilot exit status: 0
[2026-03-14 18:40:27] 2026-03-15 01:40:27,478 [wrapper] pandaids: 7055232252
[2026-03-14 18:40:27] 2026-03-15 01:40:27,518 [wrapper] cleanup supervisor_pilot  809399 809394
[2026-03-14 18:40:27] 2026-03-15 01:40:27,520 [wrapper] Test setup, not cleaning
[2026-03-14 18:40:27] 2026-03-15 01:40:27,523 [wrapper] apfmon messages muted
[2026-03-14 18:40:27] 2026-03-15 01:40:27,524 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:40:27] 2026-03-15 01:40:27,526 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:40:27]  *** Error codes and diagnostics ***
[2026-03-14 18:40:27]     "exeErrorCode": 65,
[2026-03-14 18:40:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-14 18:40:27]     "pilotErrorCode": 1305,
[2026-03-14 18:40:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-14 18:40:27]  *** Listing of results directory ***
[2026-03-14 18:40:27] total 215544
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc    585013 Mar 14 14:44 pilot3.tar.gz
[2026-03-14 18:40:27] -rwx------. 1 boinc boinc     36322 Mar 14 14:45 runpilot2-wrapper.sh
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc      5111 Mar 14 14:46 queuedata.json
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc       100 Mar 14 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:40:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 18:35 run_atlas
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc       105 Mar 14 18:35 job.xml
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc      6594 Mar 14 18:35 init_data.xml
[2026-03-14 18:40:27] -rw-r--r--. 2 boinc boinc 216573298 Mar 14 18:35 EVNT.48967092._000355.pool.root.1
[2026-03-14 18:40:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:35 start_atlas.sh
[2026-03-14 18:40:27] drwxrwx--x. 2 boinc boinc      4096 Mar 14 18:35 shared
[2026-03-14 18:40:27] -rw-r--r--. 2 boinc boinc    597534 Mar 14 18:35 input.tar.gz
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc         0 Mar 14 18:35 boinc_lockfile
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc      2597 Mar 14 18:35 pandaJob.out
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc   1006481 Mar 14 18:36 agis_schedconf.cvmfs.json
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc   1511579 Mar 14 18:36 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc       438 Mar 14 18:36 workernode_map.json
[2026-03-14 18:40:27] drwx------. 5 boinc boinc      4096 Mar 14 18:36 pilot3
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc       524 Mar 14 18:37 boinc_task_state.xml
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc       960 Mar 14 18:37 memory_monitor_summary.json
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc     21348 Mar 14 18:37 log.48967094._008964.job.log.tgz.1
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc      7008 Mar 14 18:39 heartbeat.json
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc        95 Mar 14 18:40 pilot_heartbeat.json
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc        22 Mar 14 18:40 wrapper_checkpoint.txt
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc      8192 Mar 14 18:40 boinc_mmap_file
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc      4818 Mar 14 18:40 pilotlog.txt
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc     85830 Mar 14 18:40 log.48967094._008964.job.log.1
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc       188 Mar 14 18:40 output.list
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc       620 Mar 14 18:40 runtime_log
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc    122880 Mar 14 18:40 result.tar.gz
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc      8635 Mar 14 18:40 runtime_log.err
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc       643 Mar 14 18:40 9u3MDmVylL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIrrLDmDWORnm.diag
[2026-03-14 18:40:27] -rw-r--r--. 1 boinc boinc     21769 Mar 14 18:40 stderr.txt
[2026-03-14 18:40:27] No HITS result produced
[2026-03-14 18:40:27]  *** Contents of shared directory: ***
[2026-03-14 18:40:27] total 212224
[2026-03-14 18:40:27] -rw-r--r--. 2 boinc boinc 216573298 Mar 14 18:35 ATLAS.root_0
[2026-03-14 18:40:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:35 start_atlas.sh
[2026-03-14 18:40:27] -rw-r--r--. 2 boinc boinc    597534 Mar 14 18:35 input.tar.gz
[2026-03-14 18:40:27] -rw-------. 1 boinc boinc    122880 Mar 14 18:40 result.tar.gz
18:40:29 (805693): run_atlas exited; CPU time 19.976940
18:40:29 (805693): called boinc_finish(0)

</stderr_txt>
]]>

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