Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:36 (3931658): wrapper (7.7.26015): starting
21:38:36 (3931658): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 21:38:36] Arguments: --nthreads 4
[2026-03-15 21:38:36] Threads: 4
[2026-03-15 21:38:36] Checking for CVMFS
[2026-03-15 21:38:36] No cvmfs_config command found, will try listing directly
[2026-03-15 21:38:36] CVMFS is ok
[2026-03-15 21:38:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 21:38:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 21:38:36] Further information can be found at the LHC@home message board.
[2026-03-15 21:38:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 21:38:36] Checking for apptainer binary...
[2026-03-15 21:38:36] which: no apptainer in ((null))
[2026-03-15 21:38:36] apptainer is not installed, using version from CVMFS
[2026-03-15 21:38:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 21:38:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-03-15 21:38:36] apptainer works
[2026-03-15 21:38:36] Set ATHENA_PROC_NUMBER=4
[2026-03-15 21:38:36] Set ATHENA_CORE_NUMBER=4
[2026-03-15 21:38:36] Starting ATLAS job with PandaID=7047572574
[2026-03-15 21:38:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 00:41:36]  *** The last 200 lines of the pilot log: ***
[2026-03-16 00:41:36] 2026-03-15 23:40:46,974 | INFO     | extracted standard info from prmon json
[2026-03-16 00:41:36] 2026-03-15 23:40:46,974 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 00:41:36] 2026-03-15 23:40:46,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 00:41:36] 2026-03-15 23:40:46,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 00:41:36] 2026-03-15 23:40:46,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 00:41:36] 2026-03-15 23:40:46,978 | INFO     | fitting pss+swap vs Time
[2026-03-16 00:41:36] 2026-03-15 23:40:46,978 | INFO     | sum of square deviations: 1778377530.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,979 | INFO     | sum of deviations: 3269152991.9999943
[2026-03-16 00:41:36] 2026-03-15 23:40:46,979 | INFO     | mean x: 1773612606.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,980 | INFO     | mean y: 2303113.6033519553
[2026-03-16 00:41:36] 2026-03-15 23:40:46,980 | INFO     | intersect: -3258090621.552426
[2026-03-16 00:41:36] 2026-03-15 23:40:46,980 | INFO     | chi2: 2.095293768173583
[2026-03-16 00:41:36] 2026-03-15 23:40:46,980 | INFO     | sum of square deviations: 1633472487.5
[2026-03-16 00:41:36] 2026-03-15 23:40:46,981 | INFO     | sum of deviations: 13914183844.5
[2026-03-16 00:41:36] 2026-03-15 23:40:46,981 | INFO     | mean x: 1773612453.5
[2026-03-16 00:41:36] 2026-03-15 23:40:46,982 | INFO     | mean y: 2314055.8218390807
[2026-03-16 00:41:36] 2026-03-15 23:40:46,982 | INFO     | intersect: -15105604770.936918
[2026-03-16 00:41:36] 2026-03-15 23:40:46,982 | INFO     | chi2: 1.3313229916570075
[2026-03-16 00:41:36] 2026-03-15 23:40:46,982 | INFO     | current chi2=1.3313229916570075 (change=36.46127278765833 %)
[2026-03-16 00:41:36] 2026-03-15 23:40:46,982 | INFO     | sum of square deviations: 1496660620.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,983 | INFO     | sum of deviations: 13413631599.999998
[2026-03-16 00:41:36] 2026-03-15 23:40:46,983 | INFO     | mean x: 1773612301.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,983 | INFO     | mean y: 2313497.698224852
[2026-03-16 00:41:36] 2026-03-15 23:40:46,984 | INFO     | intersect: -15893462531.233644
[2026-03-16 00:41:36] 2026-03-15 23:40:46,984 | INFO     | chi2: 1.332355111906987
[2026-03-16 00:41:36] 2026-03-15 23:40:46,984 | INFO     | current chi2=1.332355111906987 (change=-0.07752590892273566 %)
[2026-03-16 00:41:36] 2026-03-15 23:40:46,984 | INFO     | right removable region: 168
[2026-03-16 00:41:36] 2026-03-15 23:40:46,984 | INFO     | sum of square deviations: 1633472487.5
[2026-03-16 00:41:36] 2026-03-15 23:40:46,985 | INFO     | sum of deviations: -18726714947.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,985 | INFO     | mean x: 1773612758.5
[2026-03-16 00:41:36] 2026-03-15 23:40:46,985 | INFO     | mean y: 2325912.057471264
[2026-03-16 00:41:36] 2026-03-15 23:40:46,985 | INFO     | intersect: 20335659230.46872
[2026-03-16 00:41:36] 2026-03-15 23:40:46,986 | INFO     | chi2: 0.805429575655752
[2026-03-16 00:41:36] 2026-03-15 23:40:46,986 | INFO     | current chi2=0.805429575655752 (change=61.560064374275036 %)
[2026-03-16 00:41:36] 2026-03-15 23:40:46,986 | INFO     | sum of square deviations: 1496660620.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,987 | INFO     | sum of deviations: -17837494584.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,987 | INFO     | mean x: 1773612911.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,987 | INFO     | mean y: 2324905.147928994
[2026-03-16 00:41:36] 2026-03-15 23:40:46,987 | INFO     | intersect: 21140591170.26485
[2026-03-16 00:41:36] 2026-03-15 23:40:46,988 | INFO     | chi2: 0.8044242938405834
[2026-03-16 00:41:36] 2026-03-15 23:40:46,988 | INFO     | current chi2=0.8044242938405834 (change=0.12481312402143958 %)
[2026-03-16 00:41:36] 2026-03-15 23:40:46,988 | INFO     | left removable region: 20
[2026-03-16 00:41:36] 2026-03-15 23:40:46,988 | INFO     | sum of square deviations: 1005179777.0
[2026-03-16 00:41:36] 2026-03-15 23:40:46,989 | INFO     | sum of deviations: -4004000167.0000005
[2026-03-16 00:41:36] 2026-03-15 23:40:46,989 | INFO     | mean x: 1773612880.5
[2026-03-16 00:41:36] 2026-03-15 23:40:46,989 | INFO     | mean y: 2333004.635135135
[2026-03-16 00:41:36] 2026-03-15 23:40:46,989 | INFO     | intersect: 7067284401.598378
[2026-03-16 00:41:36] 2026-03-15 23:40:46,989 | INFO     | chi2: 0.013887385381983619
[2026-03-16 00:41:36] 2026-03-15 23:40:46,989 | INFO     | current memory leak: -3.98 B/s (using 148 data points, chi2=0.01)
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | could have reported an average CPU frequency of 2503 MHz (10 samples)
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | ..............................
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | . Timing measurements:
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | . get job = 0 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | . initial setup = 11 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | . payload setup = 13 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,990 | INFO     | . stage-in = 0 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,991 | INFO     | . payload execution = 10874 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,991 | INFO     | . stage-out = 1 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,991 | INFO     | . log creation = 0 s
[2026-03-16 00:41:36] 2026-03-15 23:40:46,991 | INFO     | ..............................
[2026-03-16 00:41:36] 2026-03-15 23:40:47,254 | INFO     | 
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | job summary report
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | --------------------------------------------------
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | PanDA job id: 7047572574
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | task id: 48955010
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | errors: (none)
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | pilot state: finished 
[2026-03-16 00:41:36] 2026-03-15 23:40:47,255 | INFO     | transexitcode: 0
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | exeerrorcode: 0
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | exeerrordiag: 
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | exitcode: 0
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | exitmsg: OK
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | cpuconsumptiontime: 40746 s
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | nevents: 400
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | neventsw: 0
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | pid: 3940636
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | pgrp: 3940636
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | corecount: 4
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | event service: False
[2026-03-16 00:41:36] 2026-03-15 23:40:47,256 | INFO     | sizes: {0: 2279759, 1: 2280220, 2: 2280220, 10890: 2309396, 10892: 2318610}
[2026-03-16 00:41:36] 2026-03-15 23:40:47,257 | INFO     | --------------------------------------------------
[2026-03-16 00:41:36] 2026-03-15 23:40:47,257 | INFO     | 
[2026-03-16 00:41:36] 2026-03-15 23:40:47,257 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/0
[2026-03-16 00:41:36] 2026-03-15 23:40:47,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 00:41:36] 2026-03-15 23:40:47,282 | INFO     | job 7047572574 has completed (purged errors)
[2026-03-16 00:41:36] 2026-03-15 23:40:47,282 | INFO     | overall cleanup function is called
[2026-03-16 00:41:36] 2026-03-15 23:40:48,289 | INFO     | --- collectZombieJob: --- 10, [3940636]
[2026-03-16 00:41:36] 2026-03-15 23:40:48,289 | INFO     | zombie collector waiting for pid 3940636
[2026-03-16 00:41:36] 2026-03-15 23:40:48,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 00:41:36] 2026-03-15 23:40:48,289 | INFO     | collected zombie processes
[2026-03-16 00:41:36] 2026-03-15 23:40:48,289 | INFO     | will attempt to kill all subprocesses of pid=3940636
[2026-03-16 00:41:36] 2026-03-15 23:40:48,832 | INFO     | process IDs to be killed: [3940636] (in reverse order)
[2026-03-16 00:41:36] 2026-03-15 23:40:48,968 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 00:41:36] 2026-03-15 23:40:48,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 00:41:36] 2026-03-15 23:40:48,991 | INFO     | did not find any defunct processes belonging to 3940636
[2026-03-16 00:41:36] 2026-03-15 23:40:49,013 | INFO     | did not find any defunct processes belonging to 3940636
[2026-03-16 00:41:36] 2026-03-15 23:40:49,013 | INFO     | ready for new job
[2026-03-16 00:41:36] 2026-03-15 23:40:49,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 00:41:36] 2026-03-15 23:40:49,015 | INFO     | **************************************
[2026-03-16 00:41:36] 2026-03-15 23:40:49,015 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 00:41:36] 2026-03-15 23:40:49,016 | INFO     | **************************************
[2026-03-16 00:41:36] 2026-03-15 23:40:49,016 | INFO     | 
[2026-03-16 00:41:36] 2026-03-15 23:40:49,020 | INFO     | architecture information:
[2026-03-16 00:41:36] 2026-03-15 23:40:49,021 | INFO     | executing command: cat /etc/os-release
[2026-03-16 00:41:36] 2026-03-15 23:40:49,037 | INFO     | cat /etc/os-release:
[2026-03-16 00:41:36] NAME="CentOS Linux"
[2026-03-16 00:41:36] VERSION="7 (Core)"
[2026-03-16 00:41:36] ID="centos"
[2026-03-16 00:41:36] ID_LIKE="rhel fedora"
[2026-03-16 00:41:36] VERSION_ID="7"
[2026-03-16 00:41:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 00:41:36] ANSI_COLOR="0;31"
[2026-03-16 00:41:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 00:41:36] HOME_URL="https://www.centos.org/"
[2026-03-16 00:41:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 00:41:36] 
[2026-03-16 00:41:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 00:41:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 00:41:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 00:41:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 00:41:36] 
[2026-03-16 00:41:36] 2026-03-15 23:40:49,037 | INFO     | **************************************
[2026-03-16 00:41:36] 2026-03-15 23:40:49,119 | WARNING  | process 3940636 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 00:41:36] 2026-03-15 23:40:49,368 | INFO     | using path: /var/lib/boinc/var/slot28/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 00:41:36] 2026-03-15 23:40:49,542 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/0
[2026-03-16 00:41:36] 2026-03-15 23:40:49,558 | INFO     | sufficient remaining disk space (46329233408 B)
[2026-03-16 00:41:36] 2026-03-15 23:40:49,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 00:41:36] 2026-03-15 23:40:49,559 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 00:41:36] 2026-03-15 23:40:49,559 | INFO     | update_server=False
[2026-03-16 00:41:36] 2026-03-15 23:40:49,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 00:41:36] 2026-03-15 23:40:49,740 | INFO     | number of running child processes to parent process 3940636: 1
[2026-03-16 00:41:36] 2026-03-15 23:40:49,740 | INFO     | maximum number of monitored processes: 6
[2026-03-16 00:41:36] 2026-03-15 23:40:49,740 | INFO     | aborting job monitoring since job object (job id=7047572574) has expired
[2026-03-16 00:41:36] 2026-03-15 23:40:49,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 00:41:36] 2026-03-15 23:40:49,741 | INFO     | will abort loop
[2026-03-16 00:41:36] 2026-03-15 23:40:49,849 | INFO     | all data control threads have been joined
[2026-03-16 00:41:36] 2026-03-15 23:40:49,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 00:41:36] 2026-03-15 23:40:50,175 | INFO     | all job control threads have been joined
[2026-03-16 00:41:36] 2026-03-15 23:40:50,565 | INFO     | [job] retrieve thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,566 | INFO     | all payload control threads have been joined
[2026-03-16 00:41:36] 2026-03-15 23:40:50,599 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,668 | INFO     | [job] validate thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,746 | INFO     | [job] job monitor thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,847 | INFO     | [data] copytool_in thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,854 | INFO     | [data] control thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,904 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:50,928 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:51,180 | INFO     | [job] control thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:51,442 | INFO     | [payload] validate_post thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:51,508 | INFO     | [payload] failed_post thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:51,572 | INFO     | [payload] control thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:51,877 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:51,878 | INFO     | [data] copytool_out thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:52,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 00:41:36] 2026-03-15 23:40:52,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 00:41:36] 2026-03-15 23:40:53,091 | INFO     | [job] queue monitor thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:40:56,968 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 00:41:36] 2026-03-15 23:41:19,921 | INFO     | PID=3935795 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 00:41:36] 2026-03-15 23:41:19,921 | INFO     | .. there are 11 such processes running
[2026-03-16 00:41:36] 2026-03-15 23:41:19,921 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 00:41:36] 2026-03-15 23:41:19,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 00:41:36] 2026-03-15 23:41:19,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 00:41:36] 2026-03-15 23:41:30,921 | INFO     | [monitor] cgroup control has ended
[2026-03-16 00:41:36] 2026-03-15 23:41:31,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22479151646528)>', '<ExcThread(monitor, started 22478839584512)>']
[2026-03-16 00:41:36] 2026-03-15 23:41:31,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 00:41:36] 2026-03-15 23:41:31,975 | INFO     | [monitor] control thread has ended
[2026-03-16 00:41:36] 2026-03-15 23:41:36,471 | INFO     | all workflow threads have been joined
[2026-03-16 00:41:36] 2026-03-15 23:41:36,472 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 00:41:36] 2026-03-15 23:41:36,472 | INFO     | traces error code: 0
[2026-03-16 00:41:36] 2026-03-15 23:41:36,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 00:41:36] 2026-03-15 23:41:36,634 [wrapper] ==== pilot stdout END ====
[2026-03-16 00:41:36] 2026-03-15 23:41:36,637 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 00:41:36] 2026-03-15 23:41:36,641 [wrapper] pilotpid: 3935795
[2026-03-16 00:41:36] 2026-03-15 23:41:36,643 [wrapper] Pilot exit status: 0
[2026-03-16 00:41:36] 2026-03-15 23:41:36,655 [wrapper] pandaids: 7047572574
[2026-03-16 00:41:36] 2026-03-15 23:41:36,734 [wrapper] cleanup supervisor_pilot 4156507 3935796
[2026-03-16 00:41:36] 2026-03-15 23:41:36,737 [wrapper] Test setup, not cleaning
[2026-03-16 00:41:36] 2026-03-15 23:41:36,740 [wrapper] apfmon messages muted
[2026-03-16 00:41:36] 2026-03-15 23:41:36,743 [wrapper] ==== wrapper stdout END ====
[2026-03-16 00:41:36] 2026-03-15 23:41:36,746 [wrapper] ==== wrapper stderr END ====
[2026-03-16 00:41:36]  *** Error codes and diagnostics ***
[2026-03-16 00:41:36]     "exeErrorCode": 0,
[2026-03-16 00:41:36]     "exeErrorDiag": "",
[2026-03-16 00:41:36]     "pilotErrorCode": 0,
[2026-03-16 00:41:36]     "pilotErrorDiag": "",
[2026-03-16 00:41:36]  *** Listing of results directory ***
[2026-03-16 00:41:36] total 618784
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc    585013 Mar 14 19:20 pilot3.tar.gz
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc      5111 Mar 14 19:20 queuedata.json
[2026-03-16 00:41:36] -rwx------. 1 boinc boinc     36322 Mar 14 19:21 runpilot2-wrapper.sh
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc       100 Mar 15 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 00:41:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 21:38 run_atlas
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc       105 Mar 15 21:38 job.xml
[2026-03-16 00:41:36] -rw-r--r--. 2 boinc boinc 441051078 Mar 15 21:38 EVNT.46701403._002004.pool.root.1
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc      6563 Mar 15 21:38 init_data.xml
[2026-03-16 00:41:36] -rw-r--r--. 2 boinc boinc     15845 Mar 15 21:38 start_atlas.sh
[2026-03-16 00:41:36] drwxrwx--x. 2 boinc boinc      4096 Mar 15 21:38 shared
[2026-03-16 00:41:36] -rw-r--r--. 2 boinc boinc    597526 Mar 15 21:38 input.tar.gz
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc         0 Mar 15 21:38 boinc_lockfile
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc      2564 Mar 15 21:38 pandaJob.out
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc   1006454 Mar 15 21:39 agis_schedconf.cvmfs.json
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc       448 Mar 15 21:39 workernode_map.json
[2026-03-16 00:41:36] drwx------. 5 boinc boinc      4096 Mar 15 21:39 pilot3
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc       531 Mar 16 00:40 boinc_task_state.xml
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc 184827633 Mar 16 00:40 HITS.48955010._048988.pool.root.1
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc        95 Mar 16 00:40 pilot_heartbeat.json
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc      1033 Mar 16 00:40 memory_monitor_summary.json
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc   1511579 Mar 16 00:40 agis_ddmendpoints.agis.ALL.json
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc    374466 Mar 16 00:40 log.48955010._048988.job.log.tgz.1
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc      6405 Mar 16 00:40 heartbeat.json
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc        28 Mar 16 00:41 wrapper_checkpoint.txt
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc      8192 Mar 16 00:41 boinc_mmap_file
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc      5361 Mar 16 00:41 pilotlog.txt
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc   1537848 Mar 16 00:41 log.48955010._048988.job.log.1
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc       357 Mar 16 00:41 output.list
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc       620 Mar 16 00:41 runtime_log
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc   1925120 Mar 16 00:41 result.tar.gz
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc      9205 Mar 16 00:41 runtime_log.err
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc       664 Mar 16 00:41 ingMDmLniL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmystLDmHERYem.diag
[2026-03-16 00:41:36] -rw-r--r--. 1 boinc boinc     20836 Mar 16 00:41 stderr.txt
[2026-03-16 00:41:36] HITS file was successfully produced:
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc 184827633 Mar 16 00:40 shared/HITS.pool.root.1
[2026-03-16 00:41:36]  *** Contents of shared directory: ***
[2026-03-16 00:41:36] total 613700
[2026-03-16 00:41:36] -rw-r--r--. 2 boinc boinc 441051078 Mar 15 21:38 ATLAS.root_0
[2026-03-16 00:41:36] -rw-r--r--. 2 boinc boinc     15845 Mar 15 21:38 start_atlas.sh
[2026-03-16 00:41:36] -rw-r--r--. 2 boinc boinc    597526 Mar 15 21:38 input.tar.gz
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc 184827633 Mar 16 00:40 HITS.pool.root.1
[2026-03-16 00:41:36] -rw-------. 1 boinc boinc   1925120 Mar 16 00:41 result.tar.gz
00:41:38 (3931658): run_atlas exited; CPU time 41202.685450
00:41:38 (3931658): called boinc_finish(0)

</stderr_txt>
]]>

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