Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:32:22 (963199): wrapper (7.7.26015): starting
17:32:22 (963199): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 17:32:22] Arguments: --nthreads 4
[2026-03-14 17:32:22] Threads: 4
[2026-03-14 17:32:22] Checking for CVMFS
[2026-03-14 17:32:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 17:32:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 17:32:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 17:32:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 17:32:23] 2.13.3.0 23770 2998 49924 157290 1 50 2925802 4096000 2748 130560 0 2235942 99.990 108117 358 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-14 17:32:23] CVMFS is ok
[2026-03-14 17:32:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 17:32:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-14 17:32:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-14 17:32:23] Further information can be found at the LHC@home message board.
[2026-03-14 17:32:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 17:32:23] Checking for apptainer binary...
[2026-03-14 17:32:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 17:32:23] Running /usr/bin/apptainer --version
[2026-03-14 17:32:23] apptainer version 1.4.5
[2026-03-14 17:32:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 17:32:23] P9X79
[2026-03-14 17:32:23] apptainer works
[2026-03-14 17:32:23] Set ATHENA_PROC_NUMBER=4
[2026-03-14 17:32:23] Set ATHENA_CORE_NUMBER=4
[2026-03-14 17:32:23] Starting ATLAS job with PandaID=7047531529
[2026-03-14 17:32:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 21:06:06]  *** The last 200 lines of the pilot log: ***
[2026-03-14 21:06:06] 2026-03-15 01:04:58,874 | INFO     | job 7047531529 has state=finished
[2026-03-14 21:06:06] 2026-03-15 01:04:58,874 | INFO     | preparing for final server update for job 7047531529 in state='finished'
[2026-03-14 21:06:06] 2026-03-15 01:04:58,874 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7047531529/jobReport.json
[2026-03-14 21:06:06] 2026-03-15 01:04:58,877 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/3/workernode_map.json
[2026-03-14 21:06:06] 2026-03-15 01:04:58,878 | INFO     | this job has now completed (state=finished)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,878 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,878 | INFO     | log transfer has been attempted: DONE
[2026-03-14 21:06:06] 2026-03-15 01:04:58,878 | INFO     | job 7047531529 has finished - writing final server update
[2026-03-14 21:06:06] 2026-03-15 01:04:58,879 | INFO     | total number of processed events: 400 (read)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,884 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7047531529/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,885 | INFO     | extracted standard info from prmon json
[2026-03-14 21:06:06] 2026-03-15 01:04:58,885 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 21:06:06] 2026-03-15 01:04:58,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 21:06:06] 2026-03-15 01:04:58,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 21:06:06] 2026-03-15 01:04:58,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 21:06:06] 2026-03-15 01:04:58,891 | INFO     | fitting pss+swap vs Time
[2026-03-14 21:06:06] 2026-03-15 01:04:58,892 | INFO     | sum of square deviations: 2830787960.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,893 | INFO     | sum of deviations: -17402791137.999996
[2026-03-14 21:06:06] 2026-03-15 01:04:58,894 | INFO     | mean x: 1773530316.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,894 | INFO     | mean y: 2347481.248803828
[2026-03-14 21:06:06] 2026-03-15 01:04:58,894 | INFO     | intersect: 10905452235.961386
[2026-03-14 21:06:06] 2026-03-15 01:04:58,894 | INFO     | chi2: 1.4584246509334036
[2026-03-14 21:06:06] 2026-03-15 01:04:58,895 | INFO     | sum of square deviations: 2632440055.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,896 | INFO     | sum of deviations: -17166327626.999996
[2026-03-14 21:06:06] 2026-03-15 01:04:58,897 | INFO     | mean x: 1773530163.5
[2026-03-14 21:06:06] 2026-03-15 01:04:58,897 | INFO     | mean y: 2347669.0784313725
[2026-03-14 21:06:06] 2026-03-15 01:04:58,897 | INFO     | intersect: 11567663196.465767
[2026-03-14 21:06:06] 2026-03-15 01:04:58,897 | INFO     | chi2: 1.4550247886609644
[2026-03-14 21:06:06] 2026-03-15 01:04:58,898 | INFO     | current chi2=1.4550247886609644 (change=0.23311881558387118 %)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,898 | INFO     | right removable region: 203
[2026-03-14 21:06:06] 2026-03-15 01:04:58,898 | INFO     | sum of square deviations: 2632440055.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,900 | INFO     | sum of deviations: -39642186632.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,900 | INFO     | mean x: 1773530468.5
[2026-03-14 21:06:06] 2026-03-15 01:04:58,900 | INFO     | mean y: 2364285.0784313725
[2026-03-14 21:06:06] 2026-03-15 01:04:58,900 | INFO     | intersect: 26710142757.099667
[2026-03-14 21:06:06] 2026-03-15 01:04:58,901 | INFO     | chi2: 0.13961719485670962
[2026-03-14 21:06:06] 2026-03-15 01:04:58,901 | INFO     | current chi2=0.13961719485670962 (change=90.4268489450344 %)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,901 | INFO     | sum of square deviations: 2443580700.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,903 | INFO     | sum of deviations: -31543929477.99999
[2026-03-14 21:06:06] 2026-03-15 01:04:58,903 | INFO     | mean x: 1773530621.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,903 | INFO     | mean y: 2357769.949748744
[2026-03-14 21:06:06] 2026-03-15 01:04:58,903 | INFO     | intersect: 22896680366.251774
[2026-03-14 21:06:06] 2026-03-15 01:04:58,904 | INFO     | chi2: 0.10802309627117265
[2026-03-14 21:06:06] 2026-03-15 01:04:58,904 | INFO     | current chi2=0.10802309627117265 (change=22.629088500139453 %)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,904 | INFO     | left removable region: 20
[2026-03-14 21:06:06] 2026-03-15 01:04:58,905 | INFO     | sum of square deviations: 1900284932.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,906 | INFO     | sum of deviations: -22096379651.999996
[2026-03-14 21:06:06] 2026-03-15 01:04:58,906 | INFO     | mean x: 1773530743.0
[2026-03-14 21:06:06] 2026-03-15 01:04:58,906 | INFO     | mean y: 2350285.524590164
[2026-03-14 21:06:06] 2026-03-15 01:04:58,906 | INFO     | intersect: 20624841135.134525
[2026-03-14 21:06:06] 2026-03-15 01:04:58,907 | INFO     | chi2: 0.09302246246798788
[2026-03-14 21:06:06] 2026-03-15 01:04:58,907 | INFO     | current memory leak: -11.63 B/s (using 183 data points, chi2=0.09)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,908 | INFO     | could have reported an average CPU frequency of 2870 MHz (11 samples)
[2026-03-14 21:06:06] 2026-03-15 01:04:58,908 | INFO     | ..............................
[2026-03-14 21:06:06] 2026-03-15 01:04:58,908 | INFO     | . Timing measurements:
[2026-03-14 21:06:06] 2026-03-15 01:04:58,908 | INFO     | . get job = 0 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,908 | INFO     | . initial setup = 8 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,908 | INFO     | . payload setup = 5 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,909 | INFO     | . stage-in = 0 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,909 | INFO     | . payload execution = 12721 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,909 | INFO     | . stage-out = 2 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,909 | INFO     | . log creation = 0 s
[2026-03-14 21:06:06] 2026-03-15 01:04:58,909 | INFO     | ..............................
[2026-03-14 21:06:06] 2026-03-15 01:04:59,046 | INFO     | 
[2026-03-14 21:06:06] 2026-03-15 01:04:59,046 | INFO     | job summary report
[2026-03-14 21:06:06] 2026-03-15 01:04:59,046 | INFO     | --------------------------------------------------
[2026-03-14 21:06:06] 2026-03-15 01:04:59,046 | INFO     | PanDA job id: 7047531529
[2026-03-14 21:06:06] 2026-03-15 01:04:59,047 | INFO     | task id: 48955010
[2026-03-14 21:06:06] 2026-03-15 01:04:59,047 | INFO     | errors: (none)
[2026-03-14 21:06:06] 2026-03-15 01:04:59,047 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 21:06:06] 2026-03-15 01:04:59,047 | INFO     | pilot state: finished 
[2026-03-14 21:06:06] 2026-03-15 01:04:59,047 | INFO     | transexitcode: 0
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | exeerrorcode: 0
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | exeerrordiag: 
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | exitcode: 0
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | exitmsg: OK
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | cpuconsumptiontime: 49631 s
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | nevents: 400
[2026-03-14 21:06:06] 2026-03-15 01:04:59,048 | INFO     | neventsw: 0
[2026-03-14 21:06:06] 2026-03-15 01:04:59,049 | INFO     | pid: 971902
[2026-03-14 21:06:06] 2026-03-15 01:04:59,049 | INFO     | pgrp: 971902
[2026-03-14 21:06:06] 2026-03-15 01:04:59,049 | INFO     | corecount: 4
[2026-03-14 21:06:06] 2026-03-15 01:04:59,049 | INFO     | event service: False
[2026-03-14 21:06:06] 2026-03-15 01:04:59,049 | INFO     | sizes: {0: 2279762, 1: 2280223, 12730: 2310290, 12733: 2319316, 12734: 2319372, 12736: 2319566}
[2026-03-14 21:06:06] 2026-03-15 01:04:59,049 | INFO     | --------------------------------------------------
[2026-03-14 21:06:06] 2026-03-15 01:04:59,050 | INFO     | 
[2026-03-14 21:06:06] 2026-03-15 01:04:59,050 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-14 21:06:06] 2026-03-15 01:04:59,067 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,067 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,068 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 21:06:06] 2026-03-15 01:04:59,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,071 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 21:06:06] 2026-03-15 01:04:59,071 | INFO     | job 7047531529 has completed (purged errors)
[2026-03-14 21:06:06] 2026-03-15 01:04:59,071 | INFO     | overall cleanup function is called
[2026-03-14 21:06:06] 2026-03-15 01:05:00,079 | INFO     | --- collectZombieJob: --- 10, [971902]
[2026-03-14 21:06:06] 2026-03-15 01:05:00,080 | INFO     | zombie collector waiting for pid 971902
[2026-03-14 21:06:06] 2026-03-15 01:05:00,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 21:06:06] 2026-03-15 01:05:00,080 | INFO     | collected zombie processes
[2026-03-14 21:06:06] 2026-03-15 01:05:00,080 | INFO     | will attempt to kill all subprocesses of pid=971902
[2026-03-14 21:06:06] 2026-03-15 01:05:00,334 | INFO     | process IDs to be killed: [971902] (in reverse order)
[2026-03-14 21:06:06] 2026-03-15 01:05:00,397 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 21:06:06] 2026-03-15 01:05:00,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 21:06:06] 2026-03-15 01:05:00,405 | INFO     | did not find any defunct processes belonging to 971902
[2026-03-14 21:06:06] 2026-03-15 01:05:00,412 | INFO     | did not find any defunct processes belonging to 971902
[2026-03-14 21:06:06] 2026-03-15 01:05:00,413 | INFO     | ready for new job
[2026-03-14 21:06:06] 2026-03-15 01:05:00,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 21:06:06] 2026-03-15 01:05:00,415 | INFO     | **************************************
[2026-03-14 21:06:06] 2026-03-15 01:05:00,415 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 21:06:06] 2026-03-15 01:05:00,415 | INFO     | **************************************
[2026-03-14 21:06:06] 2026-03-15 01:05:00,415 | INFO     | 
[2026-03-14 21:06:06] 2026-03-15 01:05:00,417 | INFO     | architecture information:
[2026-03-14 21:06:06] 2026-03-15 01:05:00,417 | INFO     | executing command: cat /etc/os-release
[2026-03-14 21:06:06] 2026-03-15 01:05:00,429 | INFO     | cat /etc/os-release:
[2026-03-14 21:06:06] NAME="CentOS Linux"
[2026-03-14 21:06:06] VERSION="7 (Core)"
[2026-03-14 21:06:06] ID="centos"
[2026-03-14 21:06:06] ID_LIKE="rhel fedora"
[2026-03-14 21:06:06] VERSION_ID="7"
[2026-03-14 21:06:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 21:06:06] ANSI_COLOR="0;31"
[2026-03-14 21:06:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 21:06:06] HOME_URL="https://www.centos.org/"
[2026-03-14 21:06:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 21:06:06] 
[2026-03-14 21:06:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 21:06:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 21:06:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 21:06:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 21:06:06] 
[2026-03-14 21:06:06] 2026-03-15 01:05:00,429 | INFO     | **************************************
[2026-03-14 21:06:06] 2026-03-15 01:05:00,932 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-14 21:06:06] 2026-03-15 01:05:00,946 | INFO     | sufficient remaining disk space (79585869824 B)
[2026-03-14 21:06:06] 2026-03-15 01:05:00,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 21:06:06] 2026-03-15 01:05:00,946 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 21:06:06] 2026-03-15 01:05:00,947 | INFO     | update_server=False
[2026-03-14 21:06:06] 2026-03-15 01:05:00,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 21:06:06] 2026-03-15 01:05:00,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:06:06] 2026-03-15 01:05:01,294 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 21:06:06] 2026-03-15 01:05:01,295 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 21:06:06] 2026-03-15 01:05:01,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:06:06] 2026-03-15 01:05:01,295 | INFO     | will abort loop
[2026-03-14 21:06:06] 2026-03-15 01:05:01,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 21:06:06] 2026-03-15 01:05:01,549 | INFO     | all data control threads have been joined
[2026-03-14 21:06:06] 2026-03-15 01:05:01,550 | INFO     | all payload control threads have been joined
[2026-03-14 21:06:06] 2026-03-15 01:05:01,952 | INFO     | [job] retrieve thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:01,953 | INFO     | [job] queue monitor thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:01,979 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:02,225 | INFO     | [payload] validate_post thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:02,300 | INFO     | [job] job monitor thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:02,382 | INFO     | [job] validate thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:02,413 | INFO     | all job control threads have been joined
[2026-03-14 21:06:06] 2026-03-15 01:05:02,554 | INFO     | [payload] control thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:02,554 | INFO     | [data] control thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:02,842 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:03,057 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:03,058 | INFO     | [payload] failed_post thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:03,090 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:03,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 21:06:06] 2026-03-15 01:05:03,404 | INFO     | [data] copytool_in thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:03,418 | INFO     | [job] control thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:03,485 | INFO     | [data] copytool_out thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:07,301 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 21:06:06] 2026-03-15 01:05:31,016 | INFO     | PID=967364 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 21:06:06] 2026-03-15 01:05:31,016 | INFO     | .. there are 4 such processes running
[2026-03-14 21:06:06] 2026-03-15 01:05:31,016 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 21:06:06] 2026-03-15 01:05:31,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 21:06:06] 2026-03-15 01:05:31,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 21:06:06] 2026-03-15 01:05:59,671 | INFO     | [monitor] cgroup control has ended
[2026-03-14 21:06:06] 2026-03-15 01:06:01,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134392046466880)>', '<ExcThread(monitor, started 134391690925824)>']
[2026-03-14 21:06:06] 2026-03-15 01:06:02,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 21:06:06] 2026-03-15 01:06:02,163 | INFO     | [monitor] control thread has ended
[2026-03-14 21:06:06] 2026-03-15 01:06:06,195 | INFO     | all workflow threads have been joined
[2026-03-14 21:06:06] 2026-03-15 01:06:06,196 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 21:06:06] 2026-03-15 01:06:06,196 | INFO     | traces error code: 0
[2026-03-14 21:06:06] 2026-03-15 01:06:06,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 21:06:06] 2026-03-15 01:06:06,291 [wrapper] ==== pilot stdout END ====
[2026-03-14 21:06:06] 2026-03-15 01:06:06,294 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 21:06:06] 2026-03-15 01:06:06,296 [wrapper] pilotpid: 967364
[2026-03-14 21:06:06] 2026-03-15 01:06:06,299 [wrapper] Pilot exit status: 0
[2026-03-14 21:06:06] 2026-03-15 01:06:06,308 [wrapper] pandaids: 7047531529
[2026-03-14 21:06:06] 2026-03-15 01:06:06,351 [wrapper] cleanup supervisor_pilot 1017650 967365
[2026-03-14 21:06:06] 2026-03-15 01:06:06,354 [wrapper] Test setup, not cleaning
[2026-03-14 21:06:06] 2026-03-15 01:06:06,357 [wrapper] apfmon messages muted
[2026-03-14 21:06:06] 2026-03-15 01:06:06,359 [wrapper] ==== wrapper stdout END ====
[2026-03-14 21:06:06] 2026-03-15 01:06:06,361 [wrapper] ==== wrapper stderr END ====
[2026-03-14 21:06:06]  *** Error codes and diagnostics ***
[2026-03-14 21:06:06]     "exeErrorCode": 0,
[2026-03-14 21:06:06]     "exeErrorDiag": "",
[2026-03-14 21:06:06]     "pilotErrorCode": 0,
[2026-03-14 21:06:06]     "pilotErrorDiag": "",
[2026-03-14 21:06:06]  *** Listing of results directory ***
[2026-03-14 21:06:06] total 624944
[2026-03-14 21:06:06] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 14 12:40 pilot3.tar.gz
[2026-03-14 21:06:06] -rwx------ 1 whitlerd whitlerd     36322 Mar 14 12:45 runpilot2-wrapper.sh
[2026-03-14 21:06:06] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 14 12:50 queuedata.json
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 14 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 21:06:06] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 14 17:32 run_atlas
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 14 17:32 job.xml
[2026-03-14 21:06:06] -rw-r--r-- 2 whitlerd whitlerd 443967426 Mar 14 17:32 EVNT.46701403._001988.pool.root.1
[2026-03-14 21:06:06] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 17:32 start_atlas.sh
[2026-03-14 21:06:06] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 14 17:32 shared
[2026-03-14 21:06:06] -rw-r--r-- 2 whitlerd whitlerd    597536 Mar 14 17:32 input.tar.gz
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 17:32 boinc_setup_complete
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd      8903 Mar 14 17:32 init_data.xml
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 17:32 boinc_lockfile
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd      2564 Mar 14 17:32 pandaJob.out
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd   1006481 Mar 14 17:32 agis_schedconf.cvmfs.json
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd       427 Mar 14 17:32 workernode_map.json
[2026-03-14 21:06:06] drwx------ 5 whitlerd whitlerd      4096 Mar 14 17:32 pilot3
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd       532 Mar 14 21:04 boinc_task_state.xml
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd 187560308 Mar 14 21:04 HITS.48955010._048195.pool.root.1
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd        95 Mar 14 21:04 pilot_heartbeat.json
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd      1032 Mar 14 21:04 memory_monitor_summary.json
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd   1511579 Mar 14 21:04 agis_ddmendpoints.agis.ALL.json
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd    415899 Mar 14 21:04 log.48955010._048195.job.log.tgz.1
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd      6337 Mar 14 21:04 heartbeat.json
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 14 21:06 wrapper_checkpoint.txt
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd      5018 Mar 14 21:06 pilotlog.txt
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 14 21:06 boinc_mmap_file
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd   1822383 Mar 14 21:06 log.48955010._048195.job.log.1
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd       357 Mar 14 21:06 output.list
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 14 21:06 runtime_log
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd   2252800 Mar 14 21:06 result.tar.gz
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd      8985 Mar 14 21:06 runtime_log.err
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd       645 Mar 14 21:06 LP5NDm8HhL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmW7qLDmHwN7pn.diag
[2026-03-14 21:06:06] -rw-rw-r-- 1 whitlerd whitlerd     21366 Mar 14 21:06 stderr.txt
[2026-03-14 21:06:06] HITS file was successfully produced:
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd 187560308 Mar 14 21:04 shared/HITS.pool.root.1
[2026-03-14 21:06:06]  *** Contents of shared directory: ***
[2026-03-14 21:06:06] total 619540
[2026-03-14 21:06:06] -rw-r--r-- 2 whitlerd whitlerd 443967426 Mar 14 17:32 ATLAS.root_0
[2026-03-14 21:06:06] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 17:32 start_atlas.sh
[2026-03-14 21:06:06] -rw-r--r-- 2 whitlerd whitlerd    597536 Mar 14 17:32 input.tar.gz
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd 187560308 Mar 14 21:04 HITS.pool.root.1
[2026-03-14 21:06:06] -rw------- 1 whitlerd whitlerd   2252800 Mar 14 21:06 result.tar.gz
21:06:07 (963199): run_atlas exited; CPU time 50054.604317
21:06:07 (963199): called boinc_finish(0)

</stderr_txt>
]]>

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