Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:53 (508896): wrapper (7.7.26015): starting
18:28:53 (508896): wrapper: running run_atlas (--nthreads 10)
[2026-03-14 18:28:53] Arguments: --nthreads 10
[2026-03-14 18:28:53] Threads: 10
[2026-03-14 18:28:53] Checking for CVMFS
[2026-03-14 18:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:28:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:28:54] 2.13.3.0 247178 37484 237668 157292 2 455 20498176 40960000 23395 16776704 0 63054676 99.698 43347228 33774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-14 18:28:54] CVMFS is ok
[2026-03-14 18:28:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:28:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:28:54] Further information can be found at the LHC@home message board.
[2026-03-14 18:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:28:54] Checking for apptainer binary...
[2026-03-14 18:28:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:28:54] Running /usr/bin/apptainer --version
[2026-03-14 18:28:54] apptainer version 1.4.5-2.el9
[2026-03-14 18:28:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:28:54] c6-6-39-1.aglt2.org
[2026-03-14 18:28:54] apptainer works
[2026-03-14 18:28:54] Set ATHENA_PROC_NUMBER=10
[2026-03-14 18:28:54] Set ATHENA_CORE_NUMBER=10
[2026-03-14 18:28:54] Starting ATLAS job with PandaID=7047572838
[2026-03-14 18:28:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:46:24 (939914): wrapper (7.7.26015): starting
20:46:24 (939914): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 20:46:24] Arguments: --nthreads 8
[2026-03-14 20:46:24] Threads: 8
[2026-03-14 20:46:24] This job has been restarted, cleaning up previous attempt
[2026-03-14 20:46:24] Checking for CVMFS
[2026-03-14 20:46:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 20:46:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 20:46:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 20:46:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 20:46:25] 2.13.3.0 247178 37622 241656 157296 1 493 21812219 40960001 21099 16776704 0 63457844 99.699 43434745 33779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-14 20:46:25] CVMFS is ok
[2026-03-14 20:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 20:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 20:46:25] Further information can be found at the LHC@home message board.
[2026-03-14 20:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 20:46:25] Checking for apptainer binary...
[2026-03-14 20:46:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 20:46:25] Running /usr/bin/apptainer --version
[2026-03-14 20:46:25] apptainer version 1.4.5-2.el9
[2026-03-14 20:46:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 20:46:25] c6-6-39-1.aglt2.org
[2026-03-14 20:46:25] apptainer works
[2026-03-14 20:46:25] Set ATHENA_PROC_NUMBER=8
[2026-03-14 20:46:25] Set ATHENA_CORE_NUMBER=8
[2026-03-14 20:46:25] Starting ATLAS job with PandaID=7047572838
[2026-03-14 20:46:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 01:23:19]  *** The last 200 lines of the pilot log: ***
[2026-03-15 01:23:19] 2026-03-15 05:22:32,160 | INFO     | time since job start (16551s) is within the limit (345600.0s)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,164 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7047572838/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,175 | INFO     | extracted standard info from prmon json
[2026-03-15 01:23:19] 2026-03-15 05:22:32,175 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 01:23:19] 2026-03-15 05:22:32,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 01:23:19] 2026-03-15 05:22:32,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 01:23:19] 2026-03-15 05:22:32,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 01:23:19] 2026-03-15 05:22:32,197 | INFO     | fitting pss+swap vs Time
[2026-03-15 01:23:19] 2026-03-15 05:22:32,198 | INFO     | sum of square deviations: 6171298397.468633
[2026-03-15 01:23:19] 2026-03-15 05:22:32,199 | INFO     | sum of deviations: 21475023228.53506
[2026-03-15 01:23:19] 2026-03-15 05:22:32,200 | INFO     | mean x: 1773543868.0442805
[2026-03-15 01:23:19] 2026-03-15 05:22:32,200 | INFO     | mean y: 2500409.5387453875
[2026-03-15 01:23:19] 2026-03-15 05:22:32,200 | INFO     | intersect: -6169117507.80252
[2026-03-15 01:23:19] 2026-03-15 05:22:32,200 | INFO     | chi2: 2.0433441127344216
[2026-03-15 01:23:19] 2026-03-15 05:22:32,201 | INFO     | sum of square deviations: 5835974839.958685
[2026-03-15 01:23:19] 2026-03-15 05:22:32,202 | INFO     | sum of deviations: 37863573690.22559
[2026-03-15 01:23:19] 2026-03-15 05:22:32,202 | INFO     | mean x: 1773543715.5451128
[2026-03-15 01:23:19] 2026-03-15 05:22:32,202 | INFO     | mean y: 2507746.4812030075
[2026-03-15 01:23:19] 2026-03-15 05:22:32,202 | INFO     | intersect: -11504173657.726885
[2026-03-15 01:23:19] 2026-03-15 05:22:32,203 | INFO     | chi2: 1.3550389967926018
[2026-03-15 01:23:19] 2026-03-15 05:22:32,203 | INFO     | current chi2=1.3550389967926018 (change=33.685227644829915 %)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,203 | INFO     | sum of square deviations: 5513023607.448269
[2026-03-15 01:23:19] 2026-03-15 05:22:32,217 | INFO     | sum of deviations: 36916916879.90807
[2026-03-15 01:23:19] 2026-03-15 05:22:32,217 | INFO     | mean x: 1773543563.045977
[2026-03-15 01:23:19] 2026-03-15 05:22:32,217 | INFO     | mean y: 2507299.674329502
[2026-03-15 01:23:19] 2026-03-15 05:22:32,217 | INFO     | intersect: -11873690765.468584
[2026-03-15 01:23:19] 2026-03-15 05:22:32,217 | INFO     | chi2: 1.355503142253255
[2026-03-15 01:23:19] 2026-03-15 05:22:32,218 | INFO     | current chi2=1.355503142253255 (change=-0.03425329173196931 %)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,218 | INFO     | right removable region: 260
[2026-03-15 01:23:19] 2026-03-15 05:22:32,218 | INFO     | sum of square deviations: 5835967519.958685
[2026-03-15 01:23:19] 2026-03-15 05:22:32,220 | INFO     | sum of deviations: -17777547503.25564
[2026-03-15 01:23:19] 2026-03-15 05:22:32,220 | INFO     | mean x: 1773544020.5451128
[2026-03-15 01:23:19] 2026-03-15 05:22:32,220 | INFO     | mean y: 2518110.187969925
[2026-03-15 01:23:19] 2026-03-15 05:22:32,220 | INFO     | intersect: 5405094969.385251
[2026-03-15 01:23:19] 2026-03-15 05:22:32,305 | INFO     | chi2: 0.7269161448414295
[2026-03-15 01:23:19] 2026-03-15 05:22:32,305 | INFO     | current chi2=0.7269161448414295 (change=64.42517242635829 %)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,305 | INFO     | sum of square deviations: 5513008967.448269
[2026-03-15 01:23:19] 2026-03-15 05:22:32,307 | INFO     | sum of deviations: -19773380364.14942
[2026-03-15 01:23:19] 2026-03-15 05:22:32,307 | INFO     | mean x: 1773544173.045977
[2026-03-15 01:23:19] 2026-03-15 05:22:32,307 | INFO     | mean y: 2519032.7624521074
[2026-03-15 01:23:19] 2026-03-15 05:22:32,307 | INFO     | intersect: 6363648451.075522
[2026-03-15 01:23:19] 2026-03-15 05:22:32,308 | INFO     | chi2: 0.7146877152115378
[2026-03-15 01:23:19] 2026-03-15 05:22:32,308 | INFO     | current chi2=0.7146877152115378 (change=1.6822338747971 %)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,308 | INFO     | left removable region: 20
[2026-03-15 01:23:19] 2026-03-15 05:22:32,319 | INFO     | sum of square deviations: 4286456469.399989
[2026-03-15 01:23:19] 2026-03-15 05:22:32,320 | INFO     | sum of deviations: 538167729.4000009
[2026-03-15 01:23:19] 2026-03-15 05:22:32,320 | INFO     | mean x: 1773544142.55
[2026-03-15 01:23:19] 2026-03-15 05:22:32,320 | INFO     | mean y: 2524770.55
[2026-03-15 01:23:19] 2026-03-15 05:22:32,321 | INFO     | intersect: -220144987.32588235
[2026-03-15 01:23:19] 2026-03-15 05:22:32,321 | INFO     | chi2: 0.009944912343376066
[2026-03-15 01:23:19] 2026-03-15 05:22:32,321 | INFO     | current memory leak: 0.13 B/s (using 240 data points, chi2=0.01)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | could have reported an average CPU frequency of 3095 MHz (13 samples)
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | ..............................
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . Timing measurements:
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . get job = 0 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . initial setup = 1 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . payload setup = 9 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . stage-in = 0 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . payload execution = 16518 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . stage-out = 4 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | . log creation = 0 s
[2026-03-15 01:23:19] 2026-03-15 05:22:32,322 | INFO     | ..............................
[2026-03-15 01:23:19] 2026-03-15 05:22:33,097 | INFO     | 
[2026-03-15 01:23:19] 2026-03-15 05:22:33,098 | INFO     | job summary report
[2026-03-15 01:23:19] 2026-03-15 05:22:33,098 | INFO     | --------------------------------------------------
[2026-03-15 01:23:19] 2026-03-15 05:22:33,098 | INFO     | PanDA job id: 7047572838
[2026-03-15 01:23:19] 2026-03-15 05:22:33,098 | INFO     | task id: 48955010
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | errors: (none)
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | pilot state: finished 
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | transexitcode: 0
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | exeerrorcode: 0
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | exeerrordiag: 
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | exitcode: 0
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | exitmsg: OK
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | cpuconsumptiontime: 36396 s
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | nevents: 400
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | neventsw: 0
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | pid: 958475
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | pgrp: 958475
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | corecount: 8
[2026-03-15 01:23:19] 2026-03-15 05:22:33,099 | INFO     | event service: False
[2026-03-15 01:23:19] 2026-03-15 05:22:33,100 | INFO     | sizes: {0: 2279974, 1: 2280180, 11: 2280208, 16532: 2312015, 16537: 2321069, 16540: 2321235}
[2026-03-15 01:23:19] 2026-03-15 05:22:33,100 | INFO     | --------------------------------------------------
[2026-03-15 01:23:19] 2026-03-15 05:22:33,100 | INFO     | 
[2026-03-15 01:23:19] 2026-03-15 05:22:33,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-15 01:23:19] 2026-03-15 05:22:33,177 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,179 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 01:23:19] 2026-03-15 05:22:33,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,179 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 01:23:19] 2026-03-15 05:22:33,179 | INFO     | job 7047572838 has completed (purged errors)
[2026-03-15 01:23:19] 2026-03-15 05:22:33,179 | INFO     | overall cleanup function is called
[2026-03-15 01:23:19] 2026-03-15 05:22:33,330 | INFO     | number of running child processes to parent process 958475: 1
[2026-03-15 01:23:19] 2026-03-15 05:22:33,330 | INFO     | maximum number of monitored processes: 6
[2026-03-15 01:23:19] 2026-03-15 05:22:33,330 | INFO     | aborting job monitoring since job object (job id=7047572838) has expired
[2026-03-15 01:23:19] 2026-03-15 05:22:34,204 | INFO     | --- collectZombieJob: --- 10, [958475]
[2026-03-15 01:23:19] 2026-03-15 05:22:34,204 | INFO     | zombie collector waiting for pid 958475
[2026-03-15 01:23:19] 2026-03-15 05:22:34,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 01:23:19] 2026-03-15 05:22:34,205 | INFO     | collected zombie processes
[2026-03-15 01:23:19] 2026-03-15 05:22:34,205 | INFO     | will attempt to kill all subprocesses of pid=958475
[2026-03-15 01:23:19] 2026-03-15 05:22:35,336 | INFO     | process IDs to be killed: [958475] (in reverse order)
[2026-03-15 01:23:19] 2026-03-15 05:22:35,504 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 01:23:19] 2026-03-15 05:22:35,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 01:23:19] 2026-03-15 05:22:35,519 | INFO     | did not find any defunct processes belonging to 958475
[2026-03-15 01:23:19] 2026-03-15 05:22:35,552 | INFO     | did not find any defunct processes belonging to 958475
[2026-03-15 01:23:19] 2026-03-15 05:22:35,553 | INFO     | ready for new job
[2026-03-15 01:23:19] 2026-03-15 05:22:35,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 01:23:19] 2026-03-15 05:22:35,564 | INFO     | **************************************
[2026-03-15 01:23:19] 2026-03-15 05:22:35,564 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 01:23:19] 2026-03-15 05:22:35,564 | INFO     | **************************************
[2026-03-15 01:23:19] 2026-03-15 05:22:35,564 | INFO     | 
[2026-03-15 01:23:19] 2026-03-15 05:22:35,567 | INFO     | architecture information:
[2026-03-15 01:23:19] 2026-03-15 05:22:35,568 | INFO     | executing command: cat /etc/os-release
[2026-03-15 01:23:19] 2026-03-15 05:22:35,654 | INFO     | cat /etc/os-release:
[2026-03-15 01:23:19] NAME="CentOS Linux"
[2026-03-15 01:23:19] VERSION="7 (Core)"
[2026-03-15 01:23:19] ID="centos"
[2026-03-15 01:23:19] ID_LIKE="rhel fedora"
[2026-03-15 01:23:19] VERSION_ID="7"
[2026-03-15 01:23:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 01:23:19] ANSI_COLOR="0;31"
[2026-03-15 01:23:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 01:23:19] HOME_URL="https://www.centos.org/"
[2026-03-15 01:23:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 01:23:19] 
[2026-03-15 01:23:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 01:23:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 01:23:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 01:23:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 01:23:19] 
[2026-03-15 01:23:19] 2026-03-15 05:22:35,655 | INFO     | **************************************
[2026-03-15 01:23:19] 2026-03-15 05:22:36,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-15 01:23:19] 2026-03-15 05:22:36,240 | INFO     | sufficient remaining disk space (72475475968 B)
[2026-03-15 01:23:19] 2026-03-15 05:22:36,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 01:23:19] 2026-03-15 05:22:36,241 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 01:23:19] 2026-03-15 05:22:36,241 | INFO     | update_server=False
[2026-03-15 01:23:19] 2026-03-15 05:22:36,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 01:23:19] 2026-03-15 05:22:36,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 01:23:19] 2026-03-15 05:22:36,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 01:23:19] 2026-03-15 05:22:36,843 | INFO     | aborting loop
[2026-03-15 01:23:19] 2026-03-15 05:22:36,898 | INFO     | all payload control threads have been joined
[2026-03-15 01:23:19] 2026-03-15 05:22:36,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 01:23:19] 2026-03-15 05:22:37,207 | INFO     | all data control threads have been joined
[2026-03-15 01:23:19] 2026-03-15 05:22:37,211 | INFO     | all job control threads have been joined
[2026-03-15 01:23:19] 2026-03-15 05:22:37,247 | INFO     | [job] retrieve thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:37,429 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:37,430 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:37,604 | INFO     | [job] validate thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:37,851 | INFO     | [job] job monitor thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:37,904 | INFO     | [payload] control thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 01:23:19] 2026-03-15 05:22:38,167 | INFO     | [payload] validate_post thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,213 | INFO     | [data] control thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,217 | INFO     | [job] control thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,239 | INFO     | [payload] failed_post thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,247 | INFO     | [data] copytool_out thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,570 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:38,602 | INFO     | [data] copytool_in thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:39,124 | INFO     | [job] queue monitor thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:22:40,938 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 01:23:19] 2026-03-15 05:23:06,512 | INFO     | PID=951047 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 01:23:19] 2026-03-15 05:23:06,512 | INFO     | .. there are 37 such processes running
[2026-03-15 01:23:19] 2026-03-15 05:23:06,512 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 01:23:19] 2026-03-15 05:23:06,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 01:23:19] 2026-03-15 05:23:06,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 01:23:19] 2026-03-15 05:23:11,600 | INFO     | [monitor] cgroup control has ended
[2026-03-15 01:23:19] 2026-03-15 05:23:12,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452606732096)>', '<ExcThread(monitor, started 140452250502912)>']
[2026-03-15 01:23:19] 2026-03-15 05:23:13,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 01:23:19] 2026-03-15 05:23:13,553 | INFO     | [monitor] control thread has ended
[2026-03-15 01:23:19] 2026-03-15 05:23:17,638 | INFO     | all workflow threads have been joined
[2026-03-15 01:23:19] 2026-03-15 05:23:17,638 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 01:23:19] 2026-03-15 05:23:17,638 | INFO     | traces error code: 0
[2026-03-15 01:23:19] 2026-03-15 05:23:17,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 01:23:19] 2026-03-15 05:23:18,252 [wrapper] ==== pilot stdout END ====
[2026-03-15 01:23:19] 2026-03-15 05:23:18,268 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 01:23:19] 2026-03-15 05:23:18,327 [wrapper] pilotpid: 951047
[2026-03-15 01:23:19] 2026-03-15 05:23:18,348 [wrapper] Pilot exit status: 0
[2026-03-15 01:23:19] 2026-03-15 05:23:18,427 [wrapper] pandaids: 7047572838 7047572838
[2026-03-15 01:23:19] 2026-03-15 05:23:18,702 [wrapper] cleanup supervisor_pilot 1581549 951048
[2026-03-15 01:23:19] 2026-03-15 05:23:18,716 [wrapper] Test setup, not cleaning
[2026-03-15 01:23:19] 2026-03-15 05:23:18,719 [wrapper] apfmon messages muted
[2026-03-15 01:23:19] 2026-03-15 05:23:18,722 [wrapper] ==== wrapper stdout END ====
[2026-03-15 01:23:19] 2026-03-15 05:23:18,724 [wrapper] ==== wrapper stderr END ====
[2026-03-15 01:23:19]  *** Error codes and diagnostics ***
[2026-03-15 01:23:19]     "exeErrorCode": 0,
[2026-03-15 01:23:19]     "exeErrorDiag": "",
[2026-03-15 01:23:19]     "pilotErrorCode": 0,
[2026-03-15 01:23:19]     "pilotErrorDiag": "",
[2026-03-15 01:23:19]  *** Listing of results directory ***
[2026-03-15 01:23:19] total 1056860
[2026-03-15 01:23:19] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas    585013 Mar 14 14:20 pilot3.tar.gz
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas      5111 Mar 14 14:20 queuedata.json
[2026-03-15 01:23:19] -rwx------. 1 boincer umatlas     36322 Mar 14 14:20 runpilot2-wrapper.sh
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas       100 Mar 14 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 01:23:19] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 18:28 run_atlas
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas       105 Mar 14 18:28 job.xml
[2026-03-15 01:23:19] -rw-r--r--. 3 boincer umatlas 443607933 Mar 14 18:28 EVNT.46701403._002006.pool.root.1
[2026-03-15 01:23:19] -rw-r--r--. 3 boincer umatlas 443607933 Mar 14 18:28 ATLAS.root_0
[2026-03-15 01:23:19] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 18:28 start_atlas.sh
[2026-03-15 01:23:19] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 18:28 shared
[2026-03-15 01:23:19] -rw-r--r--. 2 boincer umatlas    597530 Mar 14 18:28 input.tar.gz
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas         0 Mar 14 18:28 boinc_lockfile
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas      2564 Mar 14 20:46 pandaJob.out
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas        57 Mar 14 20:46 setup.sh.local
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas   1006481 Mar 14 20:46 agis_schedconf.cvmfs.json
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas       442 Mar 14 20:46 workernode_map.json
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas      6841 Mar 15 01:21 init_data.xml
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas 185881386 Mar 15 01:21 HITS.48955010._049064.pool.root.1
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas       531 Mar 15 01:21 boinc_task_state.xml
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas        96 Mar 15 01:22 pilot_heartbeat.json
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas      1040 Mar 15 01:22 memory_monitor_summary.json
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas   1511579 Mar 15 01:22 agis_ddmendpoints.agis.ALL.json
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas    472453 Mar 15 01:22 log.48955010._049064.job.log.tgz.1
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas      6390 Mar 15 01:22 heartbeat.json
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas        28 Mar 15 01:23 wrapper_checkpoint.txt
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 01:23 boinc_mmap_file
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas      4819 Mar 15 01:23 pilotlog.txt
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas   2121154 Mar 15 01:23 log.48955010._049064.job.log.1
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas       357 Mar 15 01:23 output.list
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas       620 Mar 15 01:23 runtime_log
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas   2611200 Mar 15 01:23 result.tar.gz
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas      9432 Mar 15 01:23 runtime_log.err
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas       781 Mar 15 01:23 DAaMDmNmiL9n9Rq4apOajLDm4fhM0noT9bVooX4SDml8qLDmHvXiUm.diag
[2026-03-15 01:23:19] -rw-r--r--. 1 boincer umatlas     23294 Mar 15 01:23 stderr.txt
[2026-03-15 01:23:19] HITS file was successfully produced:
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas 185881386 Mar 15 01:21 shared/HITS.pool.root.1
[2026-03-15 01:23:19]  *** Contents of shared directory: ***
[2026-03-15 01:23:19] total 617896
[2026-03-15 01:23:19] -rw-r--r--. 3 boincer umatlas 443607933 Mar 14 18:28 ATLAS.root_0
[2026-03-15 01:23:19] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 18:28 start_atlas.sh
[2026-03-15 01:23:19] -rw-r--r--. 2 boincer umatlas    597530 Mar 14 18:28 input.tar.gz
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas 185881386 Mar 15 01:21 HITS.pool.root.1
[2026-03-15 01:23:19] -rw-------. 1 boincer umatlas   2611200 Mar 15 01:23 result.tar.gz
01:23:21 (939914): run_atlas exited; CPU time 37017.108290
01:23:21 (939914): called boinc_finish(0)

</stderr_txt>
]]>

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