Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:18:56 (5760): wrapper (7.7.26015): starting
17:18:56 (5760): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 17:18:57] Arguments: --nthreads 12
[2026-03-14 17:18:57] Threads: 12
[2026-03-14 17:18:57] Checking for CVMFS
[2026-03-14 17:18:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 17:18:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 17:18:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 17:18:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 17:18:57] 2.11.2.0 3035 443686 101900 157290 2 9 18460201 20275201 1 130560 3 192187147 99.953 25836717 17162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 17:18:57] CVMFS is ok
[2026-03-14 17:18:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 17:18:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 17:18:57] Further information can be found at the LHC@home message board.
[2026-03-14 17:18:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 17:18:57] Checking for apptainer binary...
[2026-03-14 17:18:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 17:18:57] Running /usr/bin/apptainer --version
[2026-03-14 17:18:57] apptainer version 1.3.2-1.el7
[2026-03-14 17:18:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 17:18:59] c-205-31.aglt2.org
[2026-03-14 17:18:59] apptainer works
[2026-03-14 17:18:59] Set ATHENA_PROC_NUMBER=12
[2026-03-14 17:18:59] Set ATHENA_CORE_NUMBER=12
[2026-03-14 17:18:59] Starting ATLAS job with PandaID=7047462609
[2026-03-14 17:18:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:25:41]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:25:41]  storage_token=
[2026-03-14 18:25:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7047462609/log.48955010._047848.job.log.tgz.1
[2026-03-14 18:25:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/27/log.48955010._047848.job.log.tgz.1
[2026-03-14 18:25:41]  workdir=None
[2026-03-14 18:25:41] ]
[2026-03-14 18:25:41] 2026-03-14 22:25:07,091 | INFO     | transferring file log.48955010._047848.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/log.48955010._047848.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 18:25:41] 2026-03-14 22:25:07,091 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/log.48955010._047848.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._047848.job
[2026-03-14 18:25:41] 2026-03-14 22:25:07,112 | INFO     | adding to output.list: log.48955010._047848.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/27/log.48955010._047848.job.log.tg
[2026-03-14 18:25:41] 2026-03-14 22:25:07,112 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 18:25:41] 2026-03-14 22:25:07,113 | INFO     | summary of transferred files:
[2026-03-14 18:25:41] 2026-03-14 22:25:07,113 | INFO     |  -- lfn=log.48955010._047848.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 18:25:41] 2026-03-14 22:25:07,113 | INFO     | stage-out finished correctly
[2026-03-14 18:25:41] 2026-03-14 22:25:07,288 | INFO     | PID=9783 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 18:25:41] 2026-03-14 22:25:07,495 | WARNING  | process 14175 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 18:25:41] 2026-03-14 22:25:07,495 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,496 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,496 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 18:25:41] 2026-03-14 22:25:07,497 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 18:25:41] 2026-03-14 22:25:07,497 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 5689356 B
[2026-03-14 18:25:41] 2026-03-14 22:25:07,497 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15837 B
[2026-03-14 18:25:41] 2026-03-14 22:25:07,498 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 18:25:41] 2026-03-14 22:25:07,514 | INFO     | sufficient remaining disk space (28892463104 B)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,514 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,515 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7047462609: 5984512 B (within 5033164800 B limit)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,516 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7047462609/HITS.48955010._047848.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,516 | INFO     | total size of present files: 0 B (workdir size: 5984512 B)
[2026-03-14 18:25:41] 2026-03-14 22:25:07,516 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/HITS.48955010._047848.pool.root.1 since it does not exist
[2026-03-14 18:25:41] 2026-03-14 22:25:07,607 | INFO     | number of running child processes to parent process 14175: 1
[2026-03-14 18:25:41] 2026-03-14 22:25:07,607 | INFO     | maximum number of monitored processes: 6
[2026-03-14 18:25:41] 2026-03-14 22:25:08,165 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 18:25:41] 2026-03-14 22:25:08,289 | INFO     | time since job start (3949s) is within the limit (345600.0s)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,950 | INFO     | job 7047462609 has state=finished
[2026-03-14 18:25:41] 2026-03-14 22:25:08,950 | INFO     | preparing for final server update for job 7047462609 in state='finished'
[2026-03-14 18:25:41] 2026-03-14 22:25:08,950 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/jobReport.json
[2026-03-14 18:25:41] 2026-03-14 22:25:08,953 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 18:25:41] 2026-03-14 22:25:08,954 | INFO     | this job has now completed (state=finished)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,954 | INFO     | log transfer has been attempted: DONE
[2026-03-14 18:25:41] 2026-03-14 22:25:08,954 | INFO     | job 7047462609 has finished - writing final server update
[2026-03-14 18:25:41] 2026-03-14 22:25:08,954 | INFO     | total number of processed events: 400 (read)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,956 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7047462609/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,956 | INFO     | extracted standard info from prmon json
[2026-03-14 18:25:41] 2026-03-14 22:25:08,956 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:25:41] 2026-03-14 22:25:08,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:25:41] 2026-03-14 22:25:08,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:25:41] 2026-03-14 22:25:08,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:25:41] 2026-03-14 22:25:08,958 | INFO     | fitting pss+swap vs Time
[2026-03-14 18:25:41] 2026-03-14 22:25:08,958 | INFO     | sum of square deviations: 60482994.5
[2026-03-14 18:25:41] 2026-03-14 22:25:08,959 | INFO     | sum of deviations: -1883650110.0
[2026-03-14 18:25:41] 2026-03-14 22:25:08,959 | INFO     | mean x: 1773525227.5
[2026-03-14 18:25:41] 2026-03-14 22:25:08,959 | INFO     | mean y: 2934919.896551724
[2026-03-14 18:25:41] 2026-03-14 22:25:08,959 | INFO     | intersect: 55236658340.58714
[2026-03-14 18:25:41] 2026-03-14 22:25:08,959 | INFO     | chi2: 0.04806940269392056
[2026-03-14 18:25:41] 2026-03-14 22:25:08,959 | INFO     | current memory leak: -31.14 B/s (using 58 data points, chi2=0.05)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | ..............................
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . Timing measurements:
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . get job = 0 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . initial setup = 7 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . payload setup = 7 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . stage-in = 0 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . payload execution = 3924 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,960 | INFO     | . stage-out = 0 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,961 | INFO     | . log creation = 0 s
[2026-03-14 18:25:41] 2026-03-14 22:25:08,961 | INFO     | ..............................
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | 
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | job summary report
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | --------------------------------------------------
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | PanDA job id: 7047462609
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | task id: 48955010
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | errors: (none)
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | pilot state: finished 
[2026-03-14 18:25:41] 2026-03-14 22:25:09,036 | INFO     | transexitcode: 0
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | exeerrorcode: 0
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | exeerrordiag: 
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | exitcode: 0
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | exitmsg: OK
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | cpuconsumptiontime: 42592 s
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | nevents: 400
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | neventsw: 0
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | pid: 14175
[2026-03-14 18:25:41] 2026-03-14 22:25:09,037 | INFO     | pgrp: 14175
[2026-03-14 18:25:41] 2026-03-14 22:25:09,038 | INFO     | corecount: 12
[2026-03-14 18:25:41] 2026-03-14 22:25:09,038 | INFO     | event service: False
[2026-03-14 18:25:41] 2026-03-14 22:25:09,038 | INFO     | sizes: {0: 2279748, 1: 2280209, 11: 2280209, 3935: 2306040, 3936: 2315038, 3937: 2315122, 3938: 2315444}
[2026-03-14 18:25:41] 2026-03-14 22:25:09,038 | INFO     | --------------------------------------------------
[2026-03-14 18:25:41] 2026-03-14 22:25:09,038 | INFO     | 
[2026-03-14 18:25:41] 2026-03-14 22:25:09,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 18:25:41] 2026-03-14 22:25:09,060 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,060 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,060 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,060 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,063 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 18:25:41] 2026-03-14 22:25:09,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,063 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 18:25:41] 2026-03-14 22:25:09,063 | INFO     | job 7047462609 has completed (purged errors)
[2026-03-14 18:25:41] 2026-03-14 22:25:09,063 | INFO     | overall cleanup function is called
[2026-03-14 18:25:41] 2026-03-14 22:25:10,071 | INFO     | --- collectZombieJob: --- 10, [14175]
[2026-03-14 18:25:41] 2026-03-14 22:25:10,072 | INFO     | zombie collector waiting for pid 14175
[2026-03-14 18:25:41] 2026-03-14 22:25:10,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 18:25:41] 2026-03-14 22:25:10,072 | INFO     | collected zombie processes
[2026-03-14 18:25:41] 2026-03-14 22:25:10,072 | INFO     | will attempt to kill all subprocesses of pid=14175
[2026-03-14 18:25:41] 2026-03-14 22:25:10,163 | INFO     | process IDs to be killed: [14175] (in reverse order)
[2026-03-14 18:25:41] 2026-03-14 22:25:10,218 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 18:25:41] 2026-03-14 22:25:10,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 18:25:41] 2026-03-14 22:25:10,222 | INFO     | did not find any defunct processes belonging to 14175
[2026-03-14 18:25:41] 2026-03-14 22:25:10,225 | INFO     | did not find any defunct processes belonging to 14175
[2026-03-14 18:25:41] 2026-03-14 22:25:10,225 | INFO     | ready for new job
[2026-03-14 18:25:41] 2026-03-14 22:25:10,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 18:25:41] 2026-03-14 22:25:10,227 | INFO     | **************************************
[2026-03-14 18:25:41] 2026-03-14 22:25:10,227 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 18:25:41] 2026-03-14 22:25:10,227 | INFO     | **************************************
[2026-03-14 18:25:41] 2026-03-14 22:25:10,227 | INFO     | 
[2026-03-14 18:25:41] 2026-03-14 22:25:10,227 | INFO     | architecture information:
[2026-03-14 18:25:41] 2026-03-14 22:25:10,228 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:25:41] 2026-03-14 22:25:10,242 | INFO     | cat /etc/os-release:
[2026-03-14 18:25:41] NAME="CentOS Linux"
[2026-03-14 18:25:41] VERSION="7 (Core)"
[2026-03-14 18:25:41] ID="centos"
[2026-03-14 18:25:41] ID_LIKE="rhel fedora"
[2026-03-14 18:25:41] VERSION_ID="7"
[2026-03-14 18:25:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:25:41] ANSI_COLOR="0;31"
[2026-03-14 18:25:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:25:41] HOME_URL="https://www.centos.org/"
[2026-03-14 18:25:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:25:41] 
[2026-03-14 18:25:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:25:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:25:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:25:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:25:41] 
[2026-03-14 18:25:41] 2026-03-14 22:25:10,242 | INFO     | **************************************
[2026-03-14 18:25:41] 2026-03-14 22:25:10,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 18:25:41] 2026-03-14 22:25:10,762 | INFO     | sufficient remaining disk space (28898754560 B)
[2026-03-14 18:25:41] 2026-03-14 22:25:10,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:25:41] 2026-03-14 22:25:10,762 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:25:41] 2026-03-14 22:25:10,762 | INFO     | update_server=False
[2026-03-14 18:25:41] 2026-03-14 22:25:10,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:25:41] 2026-03-14 22:25:10,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:25:41] 2026-03-14 22:25:10,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:25:41] 2026-03-14 22:25:11,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:25:41] 2026-03-14 22:25:11,113 | INFO     | aborting loop
[2026-03-14 18:25:41] 2026-03-14 22:25:11,655 | INFO     | all job control threads have been joined
[2026-03-14 18:25:41] 2026-03-14 22:25:11,768 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:11,769 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:11,845 | INFO     | all data control threads have been joined
[2026-03-14 18:25:41] 2026-03-14 22:25:12,012 | INFO     | [job] validate thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,047 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,100 | INFO     | all payload control threads have been joined
[2026-03-14 18:25:41] 2026-03-14 22:25:12,126 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,512 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,540 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,660 | INFO     | [job] control thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,747 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,769 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,850 | INFO     | [data] control thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:12,980 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:13,106 | INFO     | [payload] control thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:13,174 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:14,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:25:41] 2026-03-14 22:25:18,258 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:21,390 | INFO     | job.realtimelogging is not enabled
[2026-03-14 18:25:41] 2026-03-14 22:25:22,395 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:25:41] 2026-03-14 22:25:25,581 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:25:41] 2026-03-14 22:25:25,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139769081087808)>', '<ExcThread(monitor, started 139768344069888)>']
[2026-03-14 18:25:41] 2026-03-14 22:25:30,801 | INFO     | all workflow threads have been joined
[2026-03-14 18:25:41] 2026-03-14 22:25:30,801 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:25:41] 2026-03-14 22:25:30,805 | INFO     | traces error code: 0
[2026-03-14 18:25:41] 2026-03-14 22:25:30,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:25:41] 2026-03-14 22:25:41,494 | INFO     | PID=9783 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 18:25:41] 2026-03-14 22:25:41,494 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:25:41] 2026-03-14 22:25:41,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:25:41] 2026-03-14 22:25:41,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:25:41] 2026-03-14 22:25:41,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:25:41] 2026-03-14 22:25:41,495 | INFO     | [monitor] control thread has ended
[2026-03-14 18:25:41] 2026-03-14 22:25:41,575 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:25:41] 2026-03-14 22:25:41,579 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:25:41] 2026-03-14 22:25:41,582 [wrapper] pilotpid: 9783
[2026-03-14 18:25:41] 2026-03-14 22:25:41,586 [wrapper] Pilot exit status: 0
[2026-03-14 18:25:41] 2026-03-14 22:25:41,602 [wrapper] pandaids: 7047462609
[2026-03-14 18:25:41] 2026-03-14 22:25:41,643 [wrapper] cleanup supervisor_pilot 32473 9784
[2026-03-14 18:25:41] 2026-03-14 22:25:41,646 [wrapper] Test setup, not cleaning
[2026-03-14 18:25:41] 2026-03-14 22:25:41,650 [wrapper] apfmon messages muted
[2026-03-14 18:25:41] 2026-03-14 22:25:41,654 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:25:41] 2026-03-14 22:25:41,658 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:25:41]  *** Error codes and diagnostics ***
[2026-03-14 18:25:41]     "exeErrorCode": 0,
[2026-03-14 18:25:41]     "exeErrorDiag": "",
[2026-03-14 18:25:41]     "pilotErrorCode": 0,
[2026-03-14 18:25:41]     "pilotErrorDiag": "",
[2026-03-14 18:25:41]  *** Listing of results directory ***
[2026-03-14 18:25:41] total 616856
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 12:40 pilot3.tar.gz
[2026-03-14 18:25:41] -rwx------ 1 boincer umatlas     36322 Mar 14 12:42 runpilot2-wrapper.sh
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 12:43 queuedata.json
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas       100 Mar 14 17:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:25:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 17:18 run_atlas
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas       105 Mar 14 17:18 job.xml
[2026-03-14 18:25:41] -rw-r--r-- 2 boincer umatlas 441923401 Mar 14 17:18 EVNT.46701403._001981.pool.root.1
[2026-03-14 18:25:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 17:18 start_atlas.sh
[2026-03-14 18:25:41] drwxrwx--x 2 boincer umatlas      4096 Mar 14 17:18 shared
[2026-03-14 18:25:41] -rw-r--r-- 2 boincer umatlas    597534 Mar 14 17:18 input.tar.gz
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas         0 Mar 14 17:18 boinc_lockfile
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas      2564 Mar 14 17:18 pandaJob.out
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas        57 Mar 14 17:19 setup.sh.local
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas   1006481 Mar 14 17:19 agis_schedconf.cvmfs.json
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas   1511579 Mar 14 17:19 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas       445 Mar 14 17:19 workernode_map.json
[2026-03-14 18:25:41] drwx------ 5 boincer umatlas      4096 Mar 14 17:19 pilot3
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 18:22 init_data.xml
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas 183804157 Mar 14 18:24 HITS.48955010._047848.pool.root.1
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas       530 Mar 14 18:24 boinc_task_state.xml
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas      1045 Mar 14 18:25 memory_monitor_summary.json
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas    415805 Mar 14 18:25 log.48955010._047848.job.log.tgz.1
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas        95 Mar 14 18:25 pilot_heartbeat.json
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas      6417 Mar 14 18:25 heartbeat.json
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 18:25 boinc_mmap_file
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas        27 Mar 14 18:25 wrapper_checkpoint.txt
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas       744 Mar 14 18:25 pilotlog.txt
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas    582514 Mar 14 18:25 log.48955010._047848.job.log.1
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas       357 Mar 14 18:25 output.list
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas       620 Mar 14 18:25 runtime_log
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas   1013760 Mar 14 18:25 result.tar.gz
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 18:25 runtime_log.err
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas       659 Mar 14 18:25 eASKDm3EhL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3btLDm5l7Lfm.diag
[2026-03-14 18:25:41] -rw-r--r-- 1 boincer umatlas     22577 Mar 14 18:25 stderr.txt
[2026-03-14 18:25:41] HITS file was successfully produced:
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas 183804157 Mar 14 18:24 shared/HITS.pool.root.1
[2026-03-14 18:25:41]  *** Contents of shared directory: ***
[2026-03-14 18:25:41] total 612664
[2026-03-14 18:25:41] -rw-r--r-- 2 boincer umatlas 441923401 Mar 14 17:18 ATLAS.root_0
[2026-03-14 18:25:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 17:18 start_atlas.sh
[2026-03-14 18:25:41] -rw-r--r-- 2 boincer umatlas    597534 Mar 14 17:18 input.tar.gz
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas 183804157 Mar 14 18:24 HITS.pool.root.1
[2026-03-14 18:25:41] -rw------- 1 boincer umatlas   1013760 Mar 14 18:25 result.tar.gz
18:25:43 (5760): run_atlas exited; CPU time 42575.642384
18:25:43 (5760): called boinc_finish(0)

</stderr_txt>
]]>

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