Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:10:26 (654295): wrapper (7.7.26015): starting
17:10:26 (654295): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 17:10:26] Arguments: --nthreads 8
[2026-03-14 17:10:26] Threads: 8
[2026-03-14 17:10:26] Checking for CVMFS
[2026-03-14 17:10:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 17:10:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 17:10:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 17:10:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 17:10:27] 2.13.3.0 10276 114065 293016 157289 0 880 33397626 40960000 35131 16776704 0 826469804 99.736 580024399 44997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 17:10:27] CVMFS is ok
[2026-03-14 17:10:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 17:10:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 17:10:27] Further information can be found at the LHC@home message board.
[2026-03-14 17:10:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 17:10:27] Checking for apptainer binary...
[2026-03-14 17:10:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 17:10:27] Running /usr/bin/apptainer --version
[2026-03-14 17:10:27] apptainer version 1.4.5-2.el9
[2026-03-14 17:10:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 17:10:28] c-208-36.aglt2.org
[2026-03-14 17:10:28] apptainer works
[2026-03-14 17:10:28] Set ATHENA_PROC_NUMBER=8
[2026-03-14 17:10:28] Set ATHENA_CORE_NUMBER=8
[2026-03-14 17:10:28] Starting ATLAS job with PandaID=7043586470
[2026-03-14 17:10:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:51:31]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:51:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 18:51:31]  is_altstaged=None
[2026-03-14 18:51:31]  is_tar=False
[2026-03-14 18:51:31]  lfn=log.48955006._048220.job.log.tgz.1
[2026-03-14 18:51:31]  mtime=0
[2026-03-14 18:51:31]  protocol_id=None
[2026-03-14 18:51:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 18:51:31]  replicas=None
[2026-03-14 18:51:31]  scope=mc23_13p6TeV
[2026-03-14 18:51:31]  status=None
[2026-03-14 18:51:31]  status_code=0
[2026-03-14 18:51:31]  storage_token=
[2026-03-14 18:51:31]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7043586470/log.48955006._048220.job.log.tgz.1
[2026-03-14 18:51:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/3a/log.48955006._048220.job.log.tgz.1
[2026-03-14 18:51:31]  workdir=None
[2026-03-14 18:51:31] ]
[2026-03-14 18:51:31] 2026-03-14 22:50:28,349 | INFO     | transferring file log.48955006._048220.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7043586470/log.48955006._048220.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 18:51:31] 2026-03-14 22:50:28,349 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7043586470/log.48955006._048220.job.log.tgz.1 /tmp/boinchome/slots/3/log.48955006._048220.job
[2026-03-14 18:51:31] 2026-03-14 22:50:28,391 | INFO     | adding to output.list: log.48955006._048220.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/3a/log.48955006._048220.job.log.tg
[2026-03-14 18:51:31] 2026-03-14 22:50:28,392 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 18:51:31] 2026-03-14 22:50:28,392 | INFO     | summary of transferred files:
[2026-03-14 18:51:31] 2026-03-14 22:50:28,392 | INFO     |  -- lfn=log.48955006._048220.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 18:51:31] 2026-03-14 22:50:28,393 | INFO     | stage-out finished correctly
[2026-03-14 18:51:31] 2026-03-14 22:50:28,746 | WARNING  | process 668158 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 18:51:31] 2026-03-14 22:50:28,747 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7043586470/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:51:31] 2026-03-14 22:50:29,481 | INFO     | time since job start (5954s) is within the limit (345600.0s)
[2026-03-14 18:51:31] 2026-03-14 22:50:30,007 | INFO     | number of running child processes to parent process 668158: 1
[2026-03-14 18:51:31] 2026-03-14 22:50:30,008 | INFO     | maximum number of monitored processes: 6
[2026-03-14 18:51:31] 2026-03-14 22:50:31,269 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 18:51:31] 2026-03-14 22:50:31,448 | INFO     | job 7043586470 has state=finished
[2026-03-14 18:51:31] 2026-03-14 22:50:31,449 | INFO     | preparing for final server update for job 7043586470 in state='finished'
[2026-03-14 18:51:31] 2026-03-14 22:50:31,449 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7043586470/jobReport.json
[2026-03-14 18:51:31] 2026-03-14 22:50:31,451 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-14 18:51:31] 2026-03-14 22:50:31,452 | INFO     | this job has now completed (state=finished)
[2026-03-14 18:51:31] 2026-03-14 22:50:31,452 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 18:51:31] 2026-03-14 22:50:31,452 | INFO     | log transfer has been attempted: DONE
[2026-03-14 18:51:31] 2026-03-14 22:50:31,453 | INFO     | job 7043586470 has finished - writing final server update
[2026-03-14 18:51:31] 2026-03-14 22:50:31,453 | INFO     | total number of processed events: 400 (read)
[2026-03-14 18:51:31] 2026-03-14 22:50:31,517 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7043586470/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:51:31] 2026-03-14 22:50:31,518 | INFO     | extracted standard info from prmon json
[2026-03-14 18:51:31] 2026-03-14 22:50:31,518 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:51:31] 2026-03-14 22:50:31,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:51:31] 2026-03-14 22:50:31,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:51:31] 2026-03-14 22:50:31,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | fitting pss+swap vs Time
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | sum of square deviations: 226024186.45555517
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | sum of deviations: 872010728.7444448
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | mean x: 1773525753.5222223
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | mean y: 2513548.8777777776
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | intersect: -6839822702.955431
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | chi2: 0.0495562438474394
[2026-03-14 18:51:31] 2026-03-14 22:50:31,520 | INFO     | current memory leak: 3.86 B/s (using 90 data points, chi2=0.05)
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | ..............................
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . Timing measurements:
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . get job = 0 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . initial setup = 19 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . payload setup = 25 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . stage-in = 0 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . payload execution = 5910 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . stage-out = 1 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | . log creation = 0 s
[2026-03-14 18:51:31] 2026-03-14 22:50:31,521 | INFO     | ..............................
[2026-03-14 18:51:31] 2026-03-14 22:50:31,740 | INFO     | PID=658451 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 18:51:31] 2026-03-14 22:50:31,740 | INFO     | .. there are 56 such processes running
[2026-03-14 18:51:31] 2026-03-14 22:50:32,040 | INFO     | 
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | job summary report
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | --------------------------------------------------
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | PanDA job id: 7043586470
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | task id: 48955006
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | errors: (none)
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | pilot state: finished 
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | transexitcode: 0
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | exeerrorcode: 0
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | exeerrordiag: 
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | exitcode: 0
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | exitmsg: OK
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | cpuconsumptiontime: 21800 s
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | nevents: 400
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | neventsw: 0
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | pid: 668158
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | pgrp: 668158
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | corecount: 8
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | event service: False
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | sizes: {0: 2280164, 1: 2280224, 11: 2280252, 5940: 2306936, 5942: 2315934, 5945: 2316312}
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | --------------------------------------------------
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | 
[2026-03-14 18:51:31] 2026-03-14 22:50:32,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | job 7043586470 has completed (purged errors)
[2026-03-14 18:51:31] 2026-03-14 22:50:32,124 | INFO     | overall cleanup function is called
[2026-03-14 18:51:31] 2026-03-14 22:50:33,136 | INFO     | --- collectZombieJob: --- 10, [668158]
[2026-03-14 18:51:31] 2026-03-14 22:50:33,137 | INFO     | zombie collector waiting for pid 668158
[2026-03-14 18:51:31] 2026-03-14 22:50:33,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 18:51:31] 2026-03-14 22:50:33,137 | INFO     | collected zombie processes
[2026-03-14 18:51:31] 2026-03-14 22:50:33,137 | INFO     | will attempt to kill all subprocesses of pid=668158
[2026-03-14 18:51:31] 2026-03-14 22:50:34,338 | INFO     | process IDs to be killed: [668158] (in reverse order)
[2026-03-14 18:51:31] 2026-03-14 22:50:34,688 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 18:51:31] 2026-03-14 22:50:34,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 18:51:31] 2026-03-14 22:50:34,818 | INFO     | did not find any defunct processes belonging to 668158
[2026-03-14 18:51:31] 2026-03-14 22:50:34,875 | INFO     | did not find any defunct processes belonging to 668158
[2026-03-14 18:51:31] 2026-03-14 22:50:34,876 | INFO     | ready for new job
[2026-03-14 18:51:31] 2026-03-14 22:50:34,876 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 18:51:31] 2026-03-14 22:50:34,881 | INFO     | **************************************
[2026-03-14 18:51:31] 2026-03-14 22:50:34,881 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 18:51:31] 2026-03-14 22:50:34,881 | INFO     | **************************************
[2026-03-14 18:51:31] 2026-03-14 22:50:34,881 | INFO     | 
[2026-03-14 18:51:31] 2026-03-14 22:50:34,890 | INFO     | architecture information:
[2026-03-14 18:51:31] 2026-03-14 22:50:34,893 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:51:31] 2026-03-14 22:50:34,950 | INFO     | cat /etc/os-release:
[2026-03-14 18:51:31] NAME="CentOS Linux"
[2026-03-14 18:51:31] VERSION="7 (Core)"
[2026-03-14 18:51:31] ID="centos"
[2026-03-14 18:51:31] ID_LIKE="rhel fedora"
[2026-03-14 18:51:31] VERSION_ID="7"
[2026-03-14 18:51:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:51:31] ANSI_COLOR="0;31"
[2026-03-14 18:51:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:51:31] HOME_URL="https://www.centos.org/"
[2026-03-14 18:51:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:51:31] 
[2026-03-14 18:51:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:51:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:51:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:51:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:51:31] 
[2026-03-14 18:51:31] 2026-03-14 22:50:34,950 | INFO     | **************************************
[2026-03-14 18:51:31] 2026-03-14 22:50:35,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-14 18:51:31] 2026-03-14 22:50:35,577 | INFO     | sufficient remaining disk space (168193687552 B)
[2026-03-14 18:51:31] 2026-03-14 22:50:35,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:51:31] 2026-03-14 22:50:35,578 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:51:31] 2026-03-14 22:50:35,578 | INFO     | update_server=False
[2026-03-14 18:51:31] 2026-03-14 22:50:35,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:51:31] 2026-03-14 22:50:36,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:51:31] 2026-03-14 22:50:36,070 | INFO     | aborting loop
[2026-03-14 18:51:31] 2026-03-14 22:50:36,206 | INFO     | all data control threads have been joined
[2026-03-14 18:51:31] 2026-03-14 22:50:36,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:51:31] 2026-03-14 22:50:36,585 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:36,619 | INFO     | all job control threads have been joined
[2026-03-14 18:51:31] 2026-03-14 22:50:36,685 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:36,692 | INFO     | all payload control threads have been joined
[2026-03-14 18:51:31] 2026-03-14 22:50:36,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:51:31] 2026-03-14 22:50:36,993 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:36,997 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,007 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,075 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,212 | INFO     | [data] control thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,468 | INFO     | [job] validate thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:51:31] 2026-03-14 22:50:37,492 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,629 | INFO     | [job] control thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,698 | INFO     | [payload] control thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,714 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,763 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:37,817 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:38,536 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:50:41,502 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:51:31] 2026-03-14 22:51:04,721 | INFO     | PID=658451 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 18:51:31] 2026-03-14 22:51:04,721 | INFO     | .. there are 56 such processes running
[2026-03-14 18:51:31] 2026-03-14 22:51:04,721 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:51:31] 2026-03-14 22:51:04,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:51:31] 2026-03-14 22:51:04,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:51:31] 2026-03-14 22:51:24,906 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:51:31] 2026-03-14 22:51:25,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104181143360)>', '<ExcThread(monitor, started 140103796102912)>']
[2026-03-14 18:51:31] 2026-03-14 22:51:25,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:51:31] 2026-03-14 22:51:25,859 | INFO     | [monitor] control thread has ended
[2026-03-14 18:51:31] 2026-03-14 22:51:30,540 | INFO     | all workflow threads have been joined
[2026-03-14 18:51:31] 2026-03-14 22:51:30,543 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:51:31] 2026-03-14 22:51:30,544 | INFO     | traces error code: 0
[2026-03-14 18:51:31] 2026-03-14 22:51:30,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:51:31] 2026-03-14 22:51:30,997 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:51:31] 2026-03-14 22:51:31,012 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:51:31] 2026-03-14 22:51:31,015 [wrapper] pilotpid: 658451
[2026-03-14 18:51:31] 2026-03-14 22:51:31,018 [wrapper] Pilot exit status: 0
[2026-03-14 18:51:31] 2026-03-14 22:51:31,060 [wrapper] pandaids: 7043586470
[2026-03-14 18:51:31] 2026-03-14 22:51:31,402 [wrapper] cleanup supervisor_pilot 1042821 658452
[2026-03-14 18:51:31] 2026-03-14 22:51:31,435 [wrapper] Test setup, not cleaning
[2026-03-14 18:51:31] 2026-03-14 22:51:31,442 [wrapper] apfmon messages muted
[2026-03-14 18:51:31] 2026-03-14 22:51:31,453 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:51:31] 2026-03-14 22:51:31,461 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:51:31]  *** Error codes and diagnostics ***
[2026-03-14 18:51:31]     "exeErrorCode": 0,
[2026-03-14 18:51:31]     "exeErrorDiag": "",
[2026-03-14 18:51:31]     "pilotErrorCode": 0,
[2026-03-14 18:51:31]     "pilotErrorDiag": "",
[2026-03-14 18:51:31]  *** Listing of results directory ***
[2026-03-14 18:51:31] total 621056
[2026-03-14 18:51:31] -rwx------. 1 boincer umatlas     36322 Mar 12 17:11 runpilot2-wrapper.sh
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 17:12 queuedata.json
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 17:12 pilot3.tar.gz
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas       100 Mar 14 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:51:31] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 17:10 run_atlas
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas       105 Mar 14 17:10 job.xml
[2026-03-14 18:51:31] -rw-r--r--. 2 boincer umatlas 445326558 Mar 14 17:10 EVNT.46701403._000955.pool.root.1
[2026-03-14 18:51:31] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 17:10 start_atlas.sh
[2026-03-14 18:51:31] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 17:10 shared
[2026-03-14 18:51:31] -rw-r--r--. 2 boincer umatlas    597528 Mar 14 17:10 input.tar.gz
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas         0 Mar 14 17:10 boinc_lockfile
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas      2561 Mar 14 17:10 pandaJob.out
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas        57 Mar 14 17:10 setup.sh.local
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas   1006481 Mar 14 17:10 agis_schedconf.cvmfs.json
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas   1511579 Mar 14 17:10 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas       432 Mar 14 17:11 workernode_map.json
[2026-03-14 18:51:31] drwx------. 5 boincer umatlas      4096 Mar 14 17:11 pilot3
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas      7185 Mar 14 18:47 init_data.xml
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas 184476316 Mar 14 18:50 HITS.48955006._048220.pool.root.1
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas       531 Mar 14 18:50 boinc_task_state.xml
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas        95 Mar 14 18:50 pilot_heartbeat.json
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas      1035 Mar 14 18:50 memory_monitor_summary.json
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas    324378 Mar 14 18:50 log.48955006._048220.job.log.tgz.1
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas      6333 Mar 14 18:50 heartbeat.json
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 18:51 boinc_mmap_file
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas      4820 Mar 14 18:51 pilotlog.txt
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas        27 Mar 14 18:51 wrapper_checkpoint.txt
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas    784441 Mar 14 18:51 log.48955006._048220.job.log.1
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas       357 Mar 14 18:51 output.list
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas       620 Mar 14 18:51 runtime_log
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas   1126400 Mar 14 18:51 result.tar.gz
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas       652 Mar 14 18:51 U2NODmuU2K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoIlLDmHL9cIn.diag
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas      9341 Mar 14 18:51 runtime_log.err
[2026-03-14 18:51:31] -rw-r--r--. 1 boincer umatlas     21541 Mar 14 18:51 stderr.txt
[2026-03-14 18:51:31] HITS file was successfully produced:
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas 184476316 Mar 14 18:50 shared/HITS.pool.root.1
[2026-03-14 18:51:31]  *** Contents of shared directory: ***
[2026-03-14 18:51:31] total 616752
[2026-03-14 18:51:31] -rw-r--r--. 2 boincer umatlas 445326558 Mar 14 17:10 ATLAS.root_0
[2026-03-14 18:51:31] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 17:10 start_atlas.sh
[2026-03-14 18:51:31] -rw-r--r--. 2 boincer umatlas    597528 Mar 14 17:10 input.tar.gz
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas 184476316 Mar 14 18:50 HITS.pool.root.1
[2026-03-14 18:51:31] -rw-------. 1 boincer umatlas   1126400 Mar 14 18:51 result.tar.gz
18:51:33 (654295): run_atlas exited; CPU time 22013.512104
18:51:33 (654295): called boinc_finish(0)

</stderr_txt>
]]>

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