Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:53:51 (9831): wrapper (7.7.26015): starting
04:53:51 (9831): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 04:53:51] Arguments: --nthreads 8
[2026-03-15 04:53:51] Threads: 8
[2026-03-15 04:53:51] Checking for CVMFS
[2026-03-15 04:53:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 04:53:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 04:53:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 04:53:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 04:53:56] 2.11.2.0 32117 128501 133012 157300 1 53 19591983 25165824 4616 130560 154 41074164 99.849 24396775 881 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 04:53:56] CVMFS is ok
[2026-03-15 04:53:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 04:53:56] Checking for apptainer binary...
[2026-03-15 04:53:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 04:53:56] Running /usr/bin/apptainer --version
[2026-03-15 04:53:56] apptainer version 1.3.2-1.el7
[2026-03-15 04:53:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 04:54:00] cg-vwn477.simple-grid.lan
[2026-03-15 04:54:00] apptainer works
[2026-03-15 04:54:00] Set ATHENA_PROC_NUMBER=8
[2026-03-15 04:54:00] Set ATHENA_CORE_NUMBER=8
[2026-03-15 04:54:00] Starting ATLAS job with PandaID=7047331564
[2026-03-15 04:54:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 08:36:39]  *** The last 200 lines of the pilot log: ***
[2026-03-15 08:36:39] 2026-03-15 07:35:25,741 | INFO     | extracted standard info from prmon json
[2026-03-15 08:36:39] 2026-03-15 07:35:25,742 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 08:36:39] 2026-03-15 07:35:25,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 08:36:39] 2026-03-15 07:35:25,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 08:36:39] 2026-03-15 07:35:25,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 08:36:39] 2026-03-15 07:35:25,747 | INFO     | fitting pss+swap vs Time
[2026-03-15 08:36:39] 2026-03-15 07:35:25,747 | INFO     | sum of square deviations: 2830787960.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,749 | INFO     | sum of deviations: 81470448442.00002
[2026-03-15 08:36:39] 2026-03-15 07:35:25,749 | INFO     | mean x: 1773553737.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,749 | INFO     | mean y: 2411828.727272727
[2026-03-15 08:36:39] 2026-03-15 07:35:25,749 | INFO     | intersect: -51040697132.84078
[2026-03-15 08:36:39] 2026-03-15 07:35:25,750 | INFO     | chi2: 6.223569544689297
[2026-03-15 08:36:39] 2026-03-15 07:35:25,750 | INFO     | sum of square deviations: 2632440055.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,752 | INFO     | sum of deviations: 92996304075.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,752 | INFO     | mean x: 1773553584.5
[2026-03-15 08:36:39] 2026-03-15 07:35:25,752 | INFO     | mean y: 2420485.0392156863
[2026-03-15 08:36:39] 2026-03-15 07:35:25,752 | INFO     | intersect: -62651970494.99326
[2026-03-15 08:36:39] 2026-03-15 07:35:25,753 | INFO     | chi2: 5.507910087226405
[2026-03-15 08:36:39] 2026-03-15 07:35:25,753 | INFO     | current chi2=5.507910087226405 (change=11.499179889032964 %)
[2026-03-15 08:36:39] 2026-03-15 07:35:25,753 | INFO     | right removable region: 203
[2026-03-15 08:36:39] 2026-03-15 07:35:25,753 | INFO     | sum of square deviations: 2632440055.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,759 | INFO     | sum of deviations: 11093213895.499996
[2026-03-15 08:36:39] 2026-03-15 07:35:25,759 | INFO     | mean x: 1773553889.5
[2026-03-15 08:36:39] 2026-03-15 07:35:25,760 | INFO     | mean y: 2465880.4656862747
[2026-03-15 08:36:39] 2026-03-15 07:35:25,760 | INFO     | intersect: -7471365333.297496
[2026-03-15 08:36:39] 2026-03-15 07:35:25,760 | INFO     | chi2: 1.6061930340258224
[2026-03-15 08:36:39] 2026-03-15 07:35:25,760 | INFO     | current chi2=1.6061930340258224 (change=74.1917717397981 %)
[2026-03-15 08:36:39] 2026-03-15 07:35:25,761 | INFO     | sum of square deviations: 2443580700.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,762 | INFO     | sum of deviations: -12556192114.999996
[2026-03-15 08:36:39] 2026-03-15 07:35:25,762 | INFO     | mean x: 1773554042.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,762 | INFO     | mean y: 2484779.854271357
[2026-03-15 08:36:39] 2026-03-15 07:35:25,762 | INFO     | intersect: 9115785305.466858
[2026-03-15 08:36:39] 2026-03-15 07:35:25,763 | INFO     | chi2: 0.8355328400735756
[2026-03-15 08:36:39] 2026-03-15 07:35:25,763 | INFO     | current chi2=0.8355328400735756 (change=47.980546399247864 %)
[2026-03-15 08:36:39] 2026-03-15 07:35:25,763 | INFO     | sum of square deviations: 2263977332.5
[2026-03-15 08:36:39] 2026-03-15 07:35:25,765 | INFO     | sum of deviations: -7538814594.500002
[2026-03-15 08:36:39] 2026-03-15 07:35:25,765 | INFO     | mean x: 1773554194.5
[2026-03-15 08:36:39] 2026-03-15 07:35:25,765 | INFO     | mean y: 2480485.355670103
[2026-03-15 08:36:39] 2026-03-15 07:35:25,765 | INFO     | intersect: 5908235836.2137575
[2026-03-15 08:36:39] 2026-03-15 07:35:25,766 | INFO     | chi2: 0.8040111345004387
[2026-03-15 08:36:39] 2026-03-15 07:35:25,766 | INFO     | current chi2=0.8040111345004387 (change=3.7726471134708706 %)
[2026-03-15 08:36:39] 2026-03-15 07:35:25,766 | INFO     | left removable region: 30
[2026-03-15 08:36:39] 2026-03-15 07:35:25,766 | INFO     | sum of square deviations: 1605470102.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,768 | INFO     | sum of deviations: 3963204099.0000005
[2026-03-15 08:36:39] 2026-03-15 07:35:25,768 | INFO     | mean x: 1773554469.0
[2026-03-15 08:36:39] 2026-03-15 07:35:25,768 | INFO     | mean y: 2492873.9132947978
[2026-03-15 08:36:39] 2026-03-15 07:35:25,768 | INFO     | intersect: -4375638075.136648
[2026-03-15 08:36:39] 2026-03-15 07:35:25,768 | INFO     | chi2: 0.00025509043121441083
[2026-03-15 08:36:39] 2026-03-15 07:35:25,768 | INFO     | current memory leak: 2.47 B/s (using 173 data points, chi2=0.00)
[2026-03-15 08:36:39] 2026-03-15 07:35:25,769 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-15 08:36:39] 2026-03-15 07:35:25,769 | INFO     | ..............................
[2026-03-15 08:36:39] 2026-03-15 07:35:25,769 | INFO     | . Timing measurements:
[2026-03-15 08:36:39] 2026-03-15 07:35:25,769 | INFO     | . get job = 0 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,769 | INFO     | . initial setup = 96 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,770 | INFO     | . payload setup = 122 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,770 | INFO     | . stage-in = 0 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,770 | INFO     | . payload execution = 12831 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,770 | INFO     | . stage-out = 5 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,770 | INFO     | . log creation = 1 s
[2026-03-15 08:36:39] 2026-03-15 07:35:25,770 | INFO     | ..............................
[2026-03-15 08:36:39] 2026-03-15 07:35:26,203 | INFO     | 
[2026-03-15 08:36:39] 2026-03-15 07:35:26,203 | INFO     | job summary report
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | --------------------------------------------------
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | PanDA job id: 7047331564
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | task id: 48955010
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | errors: (none)
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | pilot state: finished 
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | transexitcode: 0
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | exeerrorcode: 0
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | exeerrordiag: 
[2026-03-15 08:36:39] 2026-03-15 07:35:26,204 | INFO     | exitcode: 0
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | exitmsg: OK
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | cpuconsumptiontime: 49471 s
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | nevents: 400
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | neventsw: 0
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | pid: 18507
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | pgrp: 18507
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | corecount: 8
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | event service: False
[2026-03-15 08:36:39] 2026-03-15 07:35:26,205 | INFO     | sizes: {0: 2279088, 1: 2279773, 2: 2280234, 12: 2280234, 12958: 2310310, 12964: 2319308, 12966: 2319686}
[2026-03-15 08:36:39] 2026-03-15 07:35:26,206 | INFO     | --------------------------------------------------
[2026-03-15 08:36:39] 2026-03-15 07:35:26,206 | INFO     | 
[2026-03-15 08:36:39] 2026-03-15 07:35:26,206 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-15 08:36:39] 2026-03-15 07:35:26,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 08:36:39] 2026-03-15 07:35:26,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,550 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 08:36:39] 2026-03-15 07:35:26,550 | INFO     | job 7047331564 has completed (purged errors)
[2026-03-15 08:36:39] 2026-03-15 07:35:26,550 | INFO     | overall cleanup function is called
[2026-03-15 08:36:39] 2026-03-15 07:35:26,808 | INFO     | PID=13953 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 08:36:39] 2026-03-15 07:35:26,809 | INFO     | .. there are 9 such processes running
[2026-03-15 08:36:39] 2026-03-15 07:35:27,558 | INFO     | --- collectZombieJob: --- 10, [18507]
[2026-03-15 08:36:39] 2026-03-15 07:35:27,558 | INFO     | zombie collector waiting for pid 18507
[2026-03-15 08:36:39] 2026-03-15 07:35:27,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 08:36:39] 2026-03-15 07:35:27,559 | INFO     | collected zombie processes
[2026-03-15 08:36:39] 2026-03-15 07:35:27,559 | INFO     | will attempt to kill all subprocesses of pid=18507
[2026-03-15 08:36:39] 2026-03-15 07:35:27,674 | INFO     | process IDs to be killed: [18507] (in reverse order)
[2026-03-15 08:36:39] 2026-03-15 07:35:28,313 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 08:36:39] 2026-03-15 07:35:28,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 08:36:39] 2026-03-15 07:35:28,316 | INFO     | did not find any defunct processes belonging to 18507
[2026-03-15 08:36:39] 2026-03-15 07:35:28,318 | INFO     | did not find any defunct processes belonging to 18507
[2026-03-15 08:36:39] 2026-03-15 07:35:28,318 | INFO     | ready for new job
[2026-03-15 08:36:39] 2026-03-15 07:35:28,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 08:36:39] 2026-03-15 07:35:28,320 | INFO     | **************************************
[2026-03-15 08:36:39] 2026-03-15 07:35:28,320 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 08:36:39] 2026-03-15 07:35:28,320 | INFO     | **************************************
[2026-03-15 08:36:39] 2026-03-15 07:35:28,321 | INFO     | 
[2026-03-15 08:36:39] 2026-03-15 07:35:28,321 | INFO     | pilot is running in a VM
[2026-03-15 08:36:39] 2026-03-15 07:35:28,321 | INFO     | architecture information:
[2026-03-15 08:36:39] 2026-03-15 07:35:28,327 | INFO     | executing command: cat /etc/os-release
[2026-03-15 08:36:39] 2026-03-15 07:35:28,503 | INFO     | cat /etc/os-release:
[2026-03-15 08:36:39] NAME="CentOS Linux"
[2026-03-15 08:36:39] VERSION="7 (Core)"
[2026-03-15 08:36:39] ID="centos"
[2026-03-15 08:36:39] ID_LIKE="rhel fedora"
[2026-03-15 08:36:39] VERSION_ID="7"
[2026-03-15 08:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 08:36:39] ANSI_COLOR="0;31"
[2026-03-15 08:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 08:36:39] HOME_URL="https://www.centos.org/"
[2026-03-15 08:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 08:36:39] 
[2026-03-15 08:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 08:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 08:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 08:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 08:36:39] 
[2026-03-15 08:36:39] 2026-03-15 07:35:28,503 | INFO     | **************************************
[2026-03-15 08:36:39] 2026-03-15 07:35:29,006 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-15 08:36:39] 2026-03-15 07:35:29,190 | INFO     | sufficient remaining disk space (495947087872 B)
[2026-03-15 08:36:39] 2026-03-15 07:35:29,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 08:36:39] 2026-03-15 07:35:29,190 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 08:36:39] 2026-03-15 07:35:29,190 | INFO     | update_server=False
[2026-03-15 08:36:39] 2026-03-15 07:35:29,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 08:36:39] 2026-03-15 07:35:29,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 08:36:39] 2026-03-15 07:35:29,570 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 08:36:39] 2026-03-15 07:35:29,570 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 08:36:39] 2026-03-15 07:35:29,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:36:39] 2026-03-15 07:35:29,571 | INFO     | will abort loop
[2026-03-15 08:36:39] 2026-03-15 07:35:29,977 | INFO     | all data control threads have been joined
[2026-03-15 08:36:39] 2026-03-15 07:35:30,196 | INFO     | [job] retrieve thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,284 | INFO     | [job] validate thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,285 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,376 | INFO     | all payload control threads have been joined
[2026-03-15 08:36:39] 2026-03-15 07:35:30,576 | INFO     | [job] job monitor thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,720 | INFO     | [data] copytool_in thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,779 | INFO     | all job control threads have been joined
[2026-03-15 08:36:39] 2026-03-15 07:35:30,843 | INFO     | [payload] failed_post thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:36:39] 2026-03-15 07:35:30,952 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:30,984 | INFO     | [data] control thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 08:36:39] 2026-03-15 07:35:31,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,198 | INFO     | [data] copytool_out thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,314 | INFO     | [payload] validate_post thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,382 | INFO     | [payload] control thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,665 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,785 | INFO     | [job] control thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:31,934 | INFO     | [job] queue monitor thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:35,061 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 08:36:39] 2026-03-15 07:35:58,988 | INFO     | PID=13953 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 08:36:39] 2026-03-15 07:35:58,988 | INFO     | .. there are 9 such processes running
[2026-03-15 08:36:39] 2026-03-15 07:35:58,988 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 08:36:39] 2026-03-15 07:35:58,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 08:36:39] 2026-03-15 07:35:58,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 08:36:39] 2026-03-15 07:36:28,236 | INFO     | [monitor] cgroup control has ended
[2026-03-15 08:36:39] 2026-03-15 07:36:29,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932175988544)>', '<ExcThread(monitor, started 139931443787520)>']
[2026-03-15 08:36:39] 2026-03-15 07:36:30,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 08:36:39] 2026-03-15 07:36:30,175 | INFO     | [monitor] control thread has ended
[2026-03-15 08:36:39] 2026-03-15 07:36:34,824 | INFO     | all workflow threads have been joined
[2026-03-15 08:36:39] 2026-03-15 07:36:34,824 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 08:36:39] 2026-03-15 07:36:34,825 | INFO     | traces error code: 0
[2026-03-15 08:36:39] 2026-03-15 07:36:34,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 08:36:39] 2026-03-15 07:36:35,083 [wrapper] ==== pilot stdout END ====
[2026-03-15 08:36:39] 2026-03-15 07:36:35,097 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 08:36:39] 2026-03-15 07:36:35,183 [wrapper] pilotpid: 13953
[2026-03-15 08:36:39] 2026-03-15 07:36:35,290 [wrapper] Pilot exit status: 0
[2026-03-15 08:36:39] 2026-03-15 07:36:35,657 [wrapper] pandaids: 7047331564
[2026-03-15 08:36:39] 2026-03-15 07:36:36,262 [wrapper] cleanup supervisor_pilot  7070 13954
[2026-03-15 08:36:39] 2026-03-15 07:36:36,365 [wrapper] Test setup, not cleaning
[2026-03-15 08:36:39] 2026-03-15 07:36:36,484 [wrapper] apfmon messages muted
[2026-03-15 08:36:39] 2026-03-15 07:36:36,579 [wrapper] ==== wrapper stdout END ====
[2026-03-15 08:36:39] 2026-03-15 07:36:36,672 [wrapper] ==== wrapper stderr END ====
[2026-03-15 08:36:39]  *** Error codes and diagnostics ***
[2026-03-15 08:36:39]     "exeErrorCode": 0,
[2026-03-15 08:36:39]     "exeErrorDiag": "",
[2026-03-15 08:36:39]     "pilotErrorCode": 0,
[2026-03-15 08:36:39]     "pilotErrorDiag": "",
[2026-03-15 08:36:39]  *** Listing of results directory ***
[2026-03-15 08:36:39] total 620732
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 08:36:39] -rwx------. 1 boinc boinc     36322 Mar 14 17:41 runpilot2-wrapper.sh
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 17:42 queuedata.json
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc       100 Mar 15 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 08:36:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 04:53 run_atlas
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc       105 Mar 15 04:53 job.xml
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc      6391 Mar 15 04:53 init_data.xml
[2026-03-15 08:36:39] -rw-r--r--. 2 boinc boinc 444557363 Mar 15 04:53 EVNT.46701403._001962.pool.root.1
[2026-03-15 08:36:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 04:53 start_atlas.sh
[2026-03-15 08:36:39] drwxrwx--x. 2 boinc boinc        68 Mar 15 04:53 shared
[2026-03-15 08:36:39] -rw-r--r--. 2 boinc boinc    597531 Mar 15 04:53 input.tar.gz
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc         0 Mar 15 04:53 boinc_lockfile
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc      2563 Mar 15 04:54 pandaJob.out
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc       415 Mar 15 04:59 workernode_map.json
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc   1006481 Mar 15 04:59 agis_schedconf.cvmfs.json
[2026-03-15 08:36:39] drwx------. 5 boinc boinc      4096 Mar 15 04:59 pilot3
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc 182639868 Mar 15 08:34 HITS.48955010._046882.pool.root.1
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc       531 Mar 15 08:34 boinc_task_state.xml
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc        95 Mar 15 08:35 pilot_heartbeat.json
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc      1013 Mar 15 08:35 memory_monitor_summary.json
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc   1511579 Mar 15 08:35 agis_ddmendpoints.agis.ALL.json
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc    430200 Mar 15 08:35 log.48955010._046882.job.log.tgz.1
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc      6319 Mar 15 08:35 heartbeat.json
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc      8192 Mar 15 08:36 boinc_mmap_file
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc        28 Mar 15 08:36 wrapper_checkpoint.txt
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc      5066 Mar 15 08:36 pilotlog.txt
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc   1822937 Mar 15 08:36 log.48955010._046882.job.log.1
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc       357 Mar 15 08:36 output.list
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc       620 Mar 15 08:36 runtime_log
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc   2273280 Mar 15 08:36 result.tar.gz
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc      8816 Mar 15 08:36 runtime_log.err
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc       654 Mar 15 08:36 1mxNDm5DhL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2sqLDmFVmM9m.diag
[2026-03-15 08:36:39] -rw-r--r--. 1 boinc boinc     20768 Mar 15 08:36 stderr.txt
[2026-03-15 08:36:39] HITS file was successfully produced:
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc 182639868 Mar 15 08:34 shared/HITS.pool.root.1
[2026-03-15 08:36:39]  *** Contents of shared directory: ***
[2026-03-15 08:36:39] total 615320
[2026-03-15 08:36:39] -rw-r--r--. 2 boinc boinc 444557363 Mar 15 04:53 ATLAS.root_0
[2026-03-15 08:36:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 04:53 start_atlas.sh
[2026-03-15 08:36:39] -rw-r--r--. 2 boinc boinc    597531 Mar 15 04:53 input.tar.gz
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc 182639868 Mar 15 08:34 HITS.pool.root.1
[2026-03-15 08:36:39] -rw-------. 1 boinc boinc   2273280 Mar 15 08:36 result.tar.gz
08:36:40 (9831): run_atlas exited; CPU time 49656.748273
08:36:40 (9831): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN