Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:38:08 (4128822): wrapper (7.7.26015): starting
14:38:08 (4128822): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 14:38:08] Arguments: --nthreads 4
[2026-03-15 14:38:08] Threads: 4
[2026-03-15 14:38:08] Checking for CVMFS
[2026-03-15 14:38:08] No cvmfs_config command found, will try listing directly
[2026-03-15 14:38:08] CVMFS is ok
[2026-03-15 14:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 14:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 14:38:08] Further information can be found at the LHC@home message board.
[2026-03-15 14:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 14:38:08] Checking for apptainer binary...
[2026-03-15 14:38:08] which: no apptainer in ((null))
[2026-03-15 14:38:08] apptainer is not installed, using version from CVMFS
[2026-03-15 14:38:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 14:38:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-15 14:38:08] apptainer works
[2026-03-15 14:38:08] Set ATHENA_PROC_NUMBER=4
[2026-03-15 14:38:08] Set ATHENA_CORE_NUMBER=4
[2026-03-15 14:38:08] Starting ATLAS job with PandaID=7054978460
[2026-03-15 14:38:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 16:17:43]  *** The last 200 lines of the pilot log: ***
[2026-03-15 16:17:43]  filetype=log
[2026-03-15 16:17:43]  guid=2a533dcb-95fc-452b-b4ae-c2d2370e307a
[2026-03-15 16:17:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 16:17:43]  is_altstaged=None
[2026-03-15 16:17:43]  is_tar=False
[2026-03-15 16:17:43]  lfn=log.48967085._023364.job.log.tgz.1
[2026-03-15 16:17:43]  mtime=0
[2026-03-15 16:17:43]  protocol_id=None
[2026-03-15 16:17:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 16:17:43]  replicas=None
[2026-03-15 16:17:43]  scope=mc23_13p6TeV
[2026-03-15 16:17:43]  status=None
[2026-03-15 16:17:43]  status_code=0
[2026-03-15 16:17:43]  storage_token=
[2026-03-15 16:17:43]  surl=/var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7054978460/log.48967085._023364.job.log.tgz.1
[2026-03-15 16:17:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/a4/log.48967085._023364.job.log.tgz.1
[2026-03-15 16:17:43]  workdir=None
[2026-03-15 16:17:43] ]
[2026-03-15 16:17:43] 2026-03-15 15:16:55,452 | INFO     | transferring file log.48967085._023364.job.log.tgz.1 from /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7054978460/log.48967085._023364.job.log.tgz.1 to /var/lib/
[2026-03-15 16:17:43] 2026-03-15 15:16:55,452 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7054978460/log.48967085._023364.job.log.tgz.1 /var/lib/boinc/var/slot116/slots/0/
[2026-03-15 16:17:43] 2026-03-15 15:16:55,470 | INFO     | adding to output.list: log.48967085._023364.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/a4/log.48967085._023364.job.log.tg
[2026-03-15 16:17:43] 2026-03-15 15:16:55,471 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 16:17:43] 2026-03-15 15:16:55,471 | INFO     | summary of transferred files:
[2026-03-15 16:17:43] 2026-03-15 15:16:55,471 | INFO     |  -- lfn=log.48967085._023364.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 16:17:43] 2026-03-15 15:16:55,471 | INFO     | stage-out finished correctly
[2026-03-15 16:17:43] 2026-03-15 15:16:56,842 | INFO     | monitor loop #428: job 0:7054978460 is in state 'finished'
[2026-03-15 16:17:43] 2026-03-15 15:16:56,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 16:17:43] 2026-03-15 15:16:57,191 | INFO     | time since job start (5910s) is within the limit (345600.0s)
[2026-03-15 16:17:43] 2026-03-15 15:16:57,420 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 16:17:43] 2026-03-15 15:16:58,180 | INFO     | job 7054978460 has state=finished
[2026-03-15 16:17:43] 2026-03-15 15:16:58,180 | INFO     | preparing for final server update for job 7054978460 in state='finished'
[2026-03-15 16:17:43] 2026-03-15 15:16:58,180 | INFO     | reading metadata from: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7054978460/jobReport.json
[2026-03-15 16:17:43] 2026-03-15 15:16:58,182 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot116/slots/0/workernode_map.json
[2026-03-15 16:17:43] 2026-03-15 15:16:58,182 | INFO     | this job has now completed (state=finished)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,182 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,182 | INFO     | log transfer has been attempted: DONE
[2026-03-15 16:17:43] 2026-03-15 15:16:58,182 | INFO     | job 7054978460 has finished - writing final server update
[2026-03-15 16:17:43] 2026-03-15 15:16:58,183 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2524971/.job.ad'
[2026-03-15 16:17:43] 2026-03-15 15:16:58,183 | INFO     | total number of processed events: 400 (read)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,202 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7054978460/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,202 | INFO     | extracted standard info from prmon json
[2026-03-15 16:17:43] 2026-03-15 15:16:58,202 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 16:17:43] 2026-03-15 15:16:58,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 16:17:43] 2026-03-15 15:16:58,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 16:17:43] 2026-03-15 15:16:58,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | fitting pss+swap vs Time
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | sum of square deviations: 226022842.5
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | sum of deviations: 3800604.9999999795
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | mean x: 1773584952.5
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | mean y: 2331396.688888889
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | intersect: -27491676.78385635
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | chi2: 0.0003087240648639074
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | current memory leak: 0.02 B/s (using 90 data points, chi2=0.00)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,204 | INFO     | could have reported an average CPU frequency of 3554 MHz (7 samples)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | ..............................
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . Timing measurements:
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . get job = 0 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . initial setup = 7 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . payload setup = 7 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . stage-in = 0 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . payload execution = 5885 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . stage-out = 0 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | . log creation = 0 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,205 | INFO     | ..............................
[2026-03-15 16:17:43] 2026-03-15 15:16:58,253 | INFO     | 
[2026-03-15 16:17:43] 2026-03-15 15:16:58,253 | INFO     | job summary report
[2026-03-15 16:17:43] 2026-03-15 15:16:58,253 | INFO     | --------------------------------------------------
[2026-03-15 16:17:43] 2026-03-15 15:16:58,253 | INFO     | PanDA job id: 7054978460
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | task id: 48967085
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | errors: (none)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | pilot state: finished 
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | transexitcode: 0
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | exeerrorcode: 0
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | exeerrordiag: 
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | exitcode: 0
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | exitmsg: OK
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | cpuconsumptiontime: 22626 s
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | nevents: 400
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | neventsw: 0
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | pid: 4139307
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | pgrp: 4139307
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | corecount: 4
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | event service: False
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | sizes: {0: 2280255, 11: 2280255, 5896: 2316039, 5898: 2316039, 5899: 2316233}
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | --------------------------------------------------
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | 
[2026-03-15 16:17:43] 2026-03-15 15:16:58,254 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-03-15 16:17:43] 2026-03-15 15:16:58,273 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,273 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,273 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,273 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | job 7054978460 has completed (purged errors)
[2026-03-15 16:17:43] 2026-03-15 15:16:58,274 | INFO     | overall cleanup function is called
[2026-03-15 16:17:43] 2026-03-15 15:16:59,280 | INFO     | --- collectZombieJob: --- 10, [4139307]
[2026-03-15 16:17:43] 2026-03-15 15:16:59,281 | INFO     | zombie collector waiting for pid 4139307
[2026-03-15 16:17:43] 2026-03-15 15:16:59,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 16:17:43] 2026-03-15 15:16:59,281 | INFO     | collected zombie processes
[2026-03-15 16:17:43] 2026-03-15 15:16:59,281 | INFO     | will attempt to kill all subprocesses of pid=4139307
[2026-03-15 16:17:43] 2026-03-15 15:16:59,743 | INFO     | process IDs to be killed: [4139307] (in reverse order)
[2026-03-15 16:17:43] 2026-03-15 15:16:59,976 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 16:17:43] 2026-03-15 15:16:59,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 16:17:43] 2026-03-15 15:17:00,007 | INFO     | did not find any defunct processes belonging to 4139307
[2026-03-15 16:17:43] 2026-03-15 15:17:00,036 | INFO     | did not find any defunct processes belonging to 4139307
[2026-03-15 16:17:43] 2026-03-15 15:17:00,037 | INFO     | ready for new job
[2026-03-15 16:17:43] 2026-03-15 15:17:00,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 16:17:43] 2026-03-15 15:17:00,038 | INFO     | **************************************
[2026-03-15 16:17:43] 2026-03-15 15:17:00,038 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 16:17:43] 2026-03-15 15:17:00,038 | INFO     | **************************************
[2026-03-15 16:17:43] 2026-03-15 15:17:00,038 | INFO     | 
[2026-03-15 16:17:43] 2026-03-15 15:17:00,043 | INFO     | architecture information:
[2026-03-15 16:17:43] 2026-03-15 15:17:00,044 | INFO     | executing command: cat /etc/os-release
[2026-03-15 16:17:43] 2026-03-15 15:17:00,057 | INFO     | cat /etc/os-release:
[2026-03-15 16:17:43] NAME="CentOS Linux"
[2026-03-15 16:17:43] VERSION="7 (Core)"
[2026-03-15 16:17:43] ID="centos"
[2026-03-15 16:17:43] ID_LIKE="rhel fedora"
[2026-03-15 16:17:43] VERSION_ID="7"
[2026-03-15 16:17:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 16:17:43] ANSI_COLOR="0;31"
[2026-03-15 16:17:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 16:17:43] HOME_URL="https://www.centos.org/"
[2026-03-15 16:17:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 16:17:43] 
[2026-03-15 16:17:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 16:17:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 16:17:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 16:17:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 16:17:43] 
[2026-03-15 16:17:43] 2026-03-15 15:17:00,058 | INFO     | **************************************
[2026-03-15 16:17:43] 2026-03-15 15:17:00,560 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-03-15 16:17:43] 2026-03-15 15:17:00,573 | INFO     | sufficient remaining disk space (149645426688 B)
[2026-03-15 16:17:43] 2026-03-15 15:17:00,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 16:17:43] 2026-03-15 15:17:00,574 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 16:17:43] 2026-03-15 15:17:00,574 | INFO     | update_server=False
[2026-03-15 16:17:43] 2026-03-15 15:17:00,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 16:17:43] 2026-03-15 15:17:00,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:17:43] 2026-03-15 15:17:00,575 | INFO     | aborting loop
[2026-03-15 16:17:43] 2026-03-15 15:17:00,801 | INFO     | all job control threads have been joined
[2026-03-15 16:17:43] 2026-03-15 15:17:01,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 16:17:43] 2026-03-15 15:17:01,266 | INFO     | all payload control threads have been joined
[2026-03-15 16:17:43] 2026-03-15 15:17:01,408 | INFO     | all data control threads have been joined
[2026-03-15 16:17:43] 2026-03-15 15:17:01,579 | INFO     | [job] retrieve thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,580 | INFO     | [job] job monitor thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,753 | INFO     | [data] copytool_in thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,789 | INFO     | [payload] failed_post thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,807 | INFO     | [job] control thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,809 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,831 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:01,896 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:02,269 | INFO     | [payload] control thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:02,355 | INFO     | [payload] validate_post thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:02,414 | INFO     | [data] control thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:02,975 | INFO     | [job] validate thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:03,034 | INFO     | [data] copytool_out thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:03,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:17:43] 2026-03-15 15:17:03,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 16:17:43] 2026-03-15 15:17:04,269 | INFO     | [job] queue monitor thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:07,485 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:11,477 | INFO     | job.realtimelogging is not enabled
[2026-03-15 16:17:43] 2026-03-15 15:17:12,483 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 16:17:43] 2026-03-15 15:17:30,849 | INFO     | PID=4133421 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 16:17:43] 2026-03-15 15:17:30,849 | INFO     | .. there are 49 such processes running
[2026-03-15 16:17:43] 2026-03-15 15:17:30,849 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 16:17:43] 2026-03-15 15:17:30,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 16:17:43] 2026-03-15 15:17:30,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 16:17:43] 2026-03-15 15:17:37,138 | INFO     | [monitor] cgroup control has ended
[2026-03-15 16:17:43] 2026-03-15 15:17:38,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23183131842368)>', '<ExcThread(monitor, started 23182894708480)>']
[2026-03-15 16:17:43] 2026-03-15 15:17:38,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 16:17:43] 2026-03-15 15:17:38,889 | INFO     | [monitor] control thread has ended
[2026-03-15 16:17:43] 2026-03-15 15:17:43,534 | INFO     | all workflow threads have been joined
[2026-03-15 16:17:43] 2026-03-15 15:17:43,534 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 16:17:43] 2026-03-15 15:17:43,534 | INFO     | traces error code: 0
[2026-03-15 16:17:43] 2026-03-15 15:17:43,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 16:17:43] 2026-03-15 15:17:43,674 [wrapper] ==== pilot stdout END ====
[2026-03-15 16:17:43] 2026-03-15 15:17:43,677 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 16:17:43] 2026-03-15 15:17:43,679 [wrapper] pilotpid: 4133421
[2026-03-15 16:17:43] 2026-03-15 15:17:43,682 [wrapper] Pilot exit status: 0
[2026-03-15 16:17:43] 2026-03-15 15:17:43,691 [wrapper] pandaids: 7054978460
[2026-03-15 16:17:43] 2026-03-15 15:17:43,826 [wrapper] cleanup supervisor_pilot  844065 4133422
[2026-03-15 16:17:43] 2026-03-15 15:17:43,828 [wrapper] Test setup, not cleaning
[2026-03-15 16:17:43] 2026-03-15 15:17:43,829 [wrapper] apfmon messages muted
[2026-03-15 16:17:43] 2026-03-15 15:17:43,831 [wrapper] ==== wrapper stdout END ====
[2026-03-15 16:17:43] 2026-03-15 15:17:43,833 [wrapper] ==== wrapper stderr END ====
[2026-03-15 16:17:43]  *** Error codes and diagnostics ***
[2026-03-15 16:17:43]     "exeErrorCode": 0,
[2026-03-15 16:17:43]     "exeErrorDiag": "",
[2026-03-15 16:17:43]     "pilotErrorCode": 0,
[2026-03-15 16:17:43]     "pilotErrorDiag": "",
[2026-03-15 16:17:43]  *** Listing of results directory ***
[2026-03-15 16:17:43] total 404432
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 16:17:43] -rwx------. 1 boinc boinc     36322 Mar 14 17:44 runpilot2-wrapper.sh
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc      5111 Mar 14 17:47 queuedata.json
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc       100 Mar 15 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 16:17:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 14:38 run_atlas
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc       105 Mar 15 14:38 job.xml
[2026-03-15 16:17:43] -rw-r--r--. 2 boinc boinc 214556317 Mar 15 14:38 EVNT.48967083._000939.pool.root.1
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc      6710 Mar 15 14:38 init_data.xml
[2026-03-15 16:17:43] -rw-r--r--. 2 boinc boinc     15845 Mar 15 14:38 start_atlas.sh
[2026-03-15 16:17:43] drwxrwx--x. 2 boinc boinc      4096 Mar 15 14:38 shared
[2026-03-15 16:17:43] -rw-r--r--. 2 boinc boinc    597531 Mar 15 14:38 input.tar.gz
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc         0 Mar 15 14:38 boinc_lockfile
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc      2564 Mar 15 14:38 pandaJob.out
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc   1006481 Mar 15 14:38 agis_schedconf.cvmfs.json
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc   1511579 Mar 15 14:38 agis_ddmendpoints.agis.ALL.json
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc       444 Mar 15 14:38 workernode_map.json
[2026-03-15 16:17:43] drwx------. 5 boinc boinc      4096 Mar 15 14:38 pilot3
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc 193361802 Mar 15 16:16 HITS.48967085._023364.pool.root.1
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc       529 Mar 15 16:16 boinc_task_state.xml
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc      1029 Mar 15 16:16 memory_monitor_summary.json
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc    287588 Mar 15 16:16 log.48967085._023364.job.log.tgz.1
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc      6348 Mar 15 16:16 heartbeat.json
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc      8192 Mar 15 16:17 boinc_mmap_file
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc        27 Mar 15 16:17 wrapper_checkpoint.txt
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc        95 Mar 15 16:17 pilot_heartbeat.json
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc      4903 Mar 15 16:17 pilotlog.txt
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc    854453 Mar 15 16:17 log.48967085._023364.job.log.1
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc       357 Mar 15 16:17 output.list
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc       620 Mar 15 16:17 runtime_log
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc   1157120 Mar 15 16:17 result.tar.gz
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc      9221 Mar 15 16:17 runtime_log.err
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc       663 Mar 15 16:17 4y2NDmCHhL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8xqLDmExBgUo.diag
[2026-03-15 16:17:43] -rw-r--r--. 1 boinc boinc     21141 Mar 15 16:17 stderr.txt
[2026-03-15 16:17:43] HITS file was successfully produced:
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc 193361802 Mar 15 16:16 shared/HITS.pool.root.1
[2026-03-15 16:17:43]  *** Contents of shared directory: ***
[2026-03-15 16:17:43] total 400100
[2026-03-15 16:17:43] -rw-r--r--. 2 boinc boinc 214556317 Mar 15 14:38 ATLAS.root_0
[2026-03-15 16:17:43] -rw-r--r--. 2 boinc boinc     15845 Mar 15 14:38 start_atlas.sh
[2026-03-15 16:17:43] -rw-r--r--. 2 boinc boinc    597531 Mar 15 14:38 input.tar.gz
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc 193361802 Mar 15 16:16 HITS.pool.root.1
[2026-03-15 16:17:43] -rw-------. 1 boinc boinc   1157120 Mar 15 16:17 result.tar.gz
16:17:45 (4128822): run_atlas exited; CPU time 22885.365880
16:17:45 (4128822): called boinc_finish(0)

</stderr_txt>
]]>

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