Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:28:55 (1388): wrapper (7.7.26015): starting
05:28:55 (1388): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 05:28:55] Arguments: --nthreads 8
[2026-03-15 05:28:55] Threads: 8
[2026-03-15 05:28:55] Checking for CVMFS
[2026-03-15 05:28:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 05:28:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 05:28:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 05:28:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 05:28:57] 2.11.2.0 7648 128518 138904 157302 2 221 24076860 25165825 4712 130560 157 42934821 99.844 26166467 887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 05:28:57] CVMFS is ok
[2026-03-15 05:28:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 05:28:57] Checking for apptainer binary...
[2026-03-15 05:28:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 05:28:57] Running /usr/bin/apptainer --version
[2026-03-15 05:28:57] apptainer version 1.3.2-1.el7
[2026-03-15 05:28:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 05:29:06] cg-vwn480.simple-grid.lan
[2026-03-15 05:29:06] apptainer works
[2026-03-15 05:29:06] Set ATHENA_PROC_NUMBER=8
[2026-03-15 05:29:06] Set ATHENA_CORE_NUMBER=8
[2026-03-15 05:29:06] Starting ATLAS job with PandaID=7047462210
[2026-03-15 05:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 09:15:21]  *** The last 200 lines of the pilot log: ***
[2026-03-15 09:15:21] 2026-03-15 08:14:18,756 | INFO     | job 7047462210 has state=finished
[2026-03-15 09:15:21] 2026-03-15 08:14:18,756 | INFO     | preparing for final server update for job 7047462210 in state='finished'
[2026-03-15 09:15:21] 2026-03-15 08:14:18,756 | INFO     | reading metadata from: /var/lib/boinc/slots/10/PanDA_Pilot-7047462210/jobReport.json
[2026-03-15 09:15:21] 2026-03-15 08:14:18,759 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/10/workernode_map.json
[2026-03-15 09:15:21] 2026-03-15 08:14:18,759 | INFO     | this job has now completed (state=finished)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,759 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,759 | INFO     | log transfer has been attempted: DONE
[2026-03-15 09:15:21] 2026-03-15 08:14:18,760 | INFO     | job 7047462210 has finished - writing final server update
[2026-03-15 09:15:21] 2026-03-15 08:14:18,760 | INFO     | total number of processed events: 400 (read)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,765 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7047462210/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,766 | INFO     | extracted standard info from prmon json
[2026-03-15 09:15:21] 2026-03-15 08:14:18,766 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 09:15:21] 2026-03-15 08:14:18,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 09:15:21] 2026-03-15 08:14:18,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 09:15:21] 2026-03-15 08:14:18,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 09:15:21] 2026-03-15 08:14:18,771 | INFO     | fitting pss+swap vs Time
[2026-03-15 09:15:21] 2026-03-15 08:14:18,772 | INFO     | sum of square deviations: 2996454322.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,773 | INFO     | sum of deviations: 39418911931.00001
[2026-03-15 09:15:21] 2026-03-15 08:14:18,773 | INFO     | mean x: 1773555947.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,774 | INFO     | mean y: 2449483.431924883
[2026-03-15 09:15:21] 2026-03-15 08:14:18,774 | INFO     | intersect: -23329007687.86625
[2026-03-15 09:15:21] 2026-03-15 08:14:18,774 | INFO     | chi2: 5.140699277277015
[2026-03-15 09:15:21] 2026-03-15 08:14:18,774 | INFO     | sum of square deviations: 2790348132.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,776 | INFO     | sum of deviations: 52412916051.99999
[2026-03-15 09:15:21] 2026-03-15 08:14:18,776 | INFO     | mean x: 1773555794.5
[2026-03-15 09:15:21] 2026-03-15 08:14:18,776 | INFO     | mean y: 2458900.221153846
[2026-03-15 09:15:21] 2026-03-15 08:14:18,777 | INFO     | intersect: -33311388180.228607
[2026-03-15 09:15:21] 2026-03-15 08:14:18,777 | INFO     | chi2: 4.4147595490876
[2026-03-15 09:15:21] 2026-03-15 08:14:18,777 | INFO     | current chi2=4.4147595490876 (change=14.121419850373721 %)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,777 | INFO     | right removable region: 207
[2026-03-15 09:15:21] 2026-03-15 08:14:18,778 | INFO     | sum of square deviations: 2790348132.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,779 | INFO     | sum of deviations: -28288786783.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,779 | INFO     | mean x: 1773556099.5
[2026-03-15 09:15:21] 2026-03-15 08:14:18,779 | INFO     | mean y: 2499481.846153846
[2026-03-15 09:15:21] 2026-03-15 08:14:18,780 | INFO     | intersect: 17982962124.148678
[2026-03-15 09:15:21] 2026-03-15 08:14:18,780 | INFO     | chi2: 1.1361876279201657
[2026-03-15 09:15:21] 2026-03-15 08:14:18,780 | INFO     | current chi2=1.1361876279201657 (change=77.89818920273441 %)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,780 | INFO     | sum of square deviations: 2593916542.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,782 | INFO     | sum of deviations: -39126733399.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,782 | INFO     | mean x: 1773556252.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,782 | INFO     | mean y: 2507809.3990147784
[2026-03-15 09:15:21] 2026-03-15 08:14:18,782 | INFO     | intersect: 26754896144.387184
[2026-03-15 09:15:21] 2026-03-15 08:14:18,783 | INFO     | chi2: 0.950547835193652
[2026-03-15 09:15:21] 2026-03-15 08:14:18,783 | INFO     | current chi2=0.950547835193652 (change=16.33883243970314 %)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,783 | INFO     | left removable region: 20
[2026-03-15 09:15:21] 2026-03-15 08:14:18,783 | INFO     | sum of square deviations: 2027639878.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,785 | INFO     | sum of deviations: -16580194182.000004
[2026-03-15 09:15:21] 2026-03-15 08:14:18,785 | INFO     | mean x: 1773556374.0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,785 | INFO     | mean y: 2511812.411764706
[2026-03-15 09:15:21] 2026-03-15 08:14:18,785 | INFO     | intersect: 14505042263.060074
[2026-03-15 09:15:21] 2026-03-15 08:14:18,785 | INFO     | chi2: 0.12839082727882434
[2026-03-15 09:15:21] 2026-03-15 08:14:18,785 | INFO     | current memory leak: -8.18 B/s (using 187 data points, chi2=0.13)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,786 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,786 | INFO     | ..............................
[2026-03-15 09:15:21] 2026-03-15 08:14:18,786 | INFO     | . Timing measurements:
[2026-03-15 09:15:21] 2026-03-15 08:14:18,786 | INFO     | . get job = 0 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,786 | INFO     | . initial setup = 96 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,786 | INFO     | . payload setup = 120 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,787 | INFO     | . stage-in = 0 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,787 | INFO     | . payload execution = 13087 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,787 | INFO     | . stage-out = 3 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,787 | INFO     | . log creation = 1 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,787 | INFO     | ..............................
[2026-03-15 09:15:21] 2026-03-15 08:14:18,897 | INFO     | 
[2026-03-15 09:15:21] 2026-03-15 08:14:18,897 | INFO     | job summary report
[2026-03-15 09:15:21] 2026-03-15 08:14:18,897 | INFO     | --------------------------------------------------
[2026-03-15 09:15:21] 2026-03-15 08:14:18,897 | INFO     | PanDA job id: 7047462210
[2026-03-15 09:15:21] 2026-03-15 08:14:18,897 | INFO     | task id: 48955010
[2026-03-15 09:15:21] 2026-03-15 08:14:18,897 | INFO     | errors: (none)
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | pilot state: finished 
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | transexitcode: 0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | exeerrorcode: 0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | exeerrordiag: 
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | exitcode: 0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | exitmsg: OK
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | cpuconsumptiontime: 49505 s
[2026-03-15 09:15:21] 2026-03-15 08:14:18,898 | INFO     | nevents: 400
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | neventsw: 0
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | pid: 9668
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | pgrp: 9668
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | corecount: 8
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | event service: False
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | sizes: {0: 2279091, 1: 2280150, 2: 2280238, 12: 2280238, 13212: 2310309, 13213: 2310308, 13217: 2319492, 13218: 2319548, 13219: 2319742}
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | --------------------------------------------------
[2026-03-15 09:15:21] 2026-03-15 08:14:18,899 | INFO     | 
[2026-03-15 09:15:21] 2026-03-15 08:14:18,900 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-15 09:15:21] 2026-03-15 08:14:18,907 | INFO     | time since job start (13230s) is within the limit (345600.0s)
[2026-03-15 09:15:21] 2026-03-15 08:14:19,203 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,203 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,203 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,203 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,205 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 09:15:21] 2026-03-15 08:14:19,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 09:15:21] 2026-03-15 08:14:19,205 | INFO     | job 7047462210 has completed (purged errors)
[2026-03-15 09:15:21] 2026-03-15 08:14:19,205 | INFO     | overall cleanup function is called
[2026-03-15 09:15:21] 2026-03-15 08:14:20,214 | INFO     | --- collectZombieJob: --- 10, [9668]
[2026-03-15 09:15:21] 2026-03-15 08:14:20,214 | INFO     | zombie collector waiting for pid 9668
[2026-03-15 09:15:21] 2026-03-15 08:14:20,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 09:15:21] 2026-03-15 08:14:20,214 | INFO     | collected zombie processes
[2026-03-15 09:15:21] 2026-03-15 08:14:20,214 | INFO     | will attempt to kill all subprocesses of pid=9668
[2026-03-15 09:15:21] 2026-03-15 08:14:20,328 | INFO     | process IDs to be killed: [9668] (in reverse order)
[2026-03-15 09:15:21] 2026-03-15 08:14:21,024 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 09:15:21] 2026-03-15 08:14:21,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 09:15:21] 2026-03-15 08:14:21,027 | INFO     | did not find any defunct processes belonging to 9668
[2026-03-15 09:15:21] 2026-03-15 08:14:21,030 | INFO     | did not find any defunct processes belonging to 9668
[2026-03-15 09:15:21] 2026-03-15 08:14:21,031 | INFO     | ready for new job
[2026-03-15 09:15:21] 2026-03-15 08:14:21,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 09:15:21] 2026-03-15 08:14:21,033 | INFO     | **************************************
[2026-03-15 09:15:21] 2026-03-15 08:14:21,033 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 09:15:21] 2026-03-15 08:14:21,033 | INFO     | **************************************
[2026-03-15 09:15:21] 2026-03-15 08:14:21,033 | INFO     | 
[2026-03-15 09:15:21] 2026-03-15 08:14:21,034 | INFO     | pilot is running in a VM
[2026-03-15 09:15:21] 2026-03-15 08:14:21,034 | INFO     | architecture information:
[2026-03-15 09:15:21] 2026-03-15 08:14:21,041 | INFO     | executing command: cat /etc/os-release
[2026-03-15 09:15:21] 2026-03-15 08:14:21,323 | INFO     | cat /etc/os-release:
[2026-03-15 09:15:21] NAME="CentOS Linux"
[2026-03-15 09:15:21] VERSION="7 (Core)"
[2026-03-15 09:15:21] ID="centos"
[2026-03-15 09:15:21] ID_LIKE="rhel fedora"
[2026-03-15 09:15:21] VERSION_ID="7"
[2026-03-15 09:15:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 09:15:21] ANSI_COLOR="0;31"
[2026-03-15 09:15:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 09:15:21] HOME_URL="https://www.centos.org/"
[2026-03-15 09:15:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 09:15:21] 
[2026-03-15 09:15:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 09:15:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 09:15:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 09:15:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 09:15:21] 
[2026-03-15 09:15:21] 2026-03-15 08:14:21,323 | INFO     | **************************************
[2026-03-15 09:15:21] 2026-03-15 08:14:21,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-15 09:15:21] 2026-03-15 08:14:22,004 | INFO     | sufficient remaining disk space (494989737984 B)
[2026-03-15 09:15:21] 2026-03-15 08:14:22,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 09:15:21] 2026-03-15 08:14:22,005 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 09:15:21] 2026-03-15 08:14:22,005 | INFO     | update_server=False
[2026-03-15 09:15:21] 2026-03-15 08:14:22,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 09:15:21] 2026-03-15 08:14:22,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 09:15:21] 2026-03-15 08:14:22,062 | INFO     | aborting loop
[2026-03-15 09:15:21] 2026-03-15 08:14:22,440 | INFO     | all payload control threads have been joined
[2026-03-15 09:15:21] 2026-03-15 08:14:22,538 | INFO     | all data control threads have been joined
[2026-03-15 09:15:21] 2026-03-15 08:14:23,011 | INFO     | [job] retrieve thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,068 | INFO     | [job] job monitor thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 09:15:21] 2026-03-15 08:14:23,360 | INFO     | [data] copytool_in thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,390 | INFO     | [payload] failed_post thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,407 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,420 | INFO     | [job] validate thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,447 | INFO     | [payload] control thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,526 | INFO     | all job control threads have been joined
[2026-03-15 09:15:21] 2026-03-15 08:14:23,545 | INFO     | [data] control thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,722 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,882 | INFO     | [payload] validate_post thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:23,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 09:15:21] 2026-03-15 08:14:24,333 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:24,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 09:15:21] 2026-03-15 08:14:24,399 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:24,533 | INFO     | [job] control thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:24,918 | INFO     | [job] queue monitor thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:25,162 | INFO     | [data] copytool_out thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:28,401 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 09:15:21] 2026-03-15 08:14:52,084 | INFO     | PID=5133 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 09:15:21] 2026-03-15 08:14:52,084 | INFO     | .. there are 9 such processes running
[2026-03-15 09:15:21] 2026-03-15 08:14:52,084 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 09:15:21] 2026-03-15 08:14:52,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 09:15:21] 2026-03-15 08:14:52,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 09:15:21] 2026-03-15 08:15:10,684 | INFO     | [monitor] cgroup control has ended
[2026-03-15 09:15:21] 2026-03-15 08:15:11,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144949278528)>', '<ExcThread(monitor, started 140144363427584)>']
[2026-03-15 09:15:21] 2026-03-15 08:15:12,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 09:15:21] 2026-03-15 08:15:12,203 | INFO     | [monitor] control thread has ended
[2026-03-15 09:15:21] 2026-03-15 08:15:16,811 | INFO     | all workflow threads have been joined
[2026-03-15 09:15:21] 2026-03-15 08:15:16,811 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 09:15:21] 2026-03-15 08:15:16,811 | INFO     | traces error code: 0
[2026-03-15 09:15:21] 2026-03-15 08:15:16,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 09:15:21] 2026-03-15 08:15:17,155 [wrapper] ==== pilot stdout END ====
[2026-03-15 09:15:21] 2026-03-15 08:15:17,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 09:15:21] 2026-03-15 08:15:17,338 [wrapper] pilotpid: 5133
[2026-03-15 09:15:21] 2026-03-15 08:15:17,433 [wrapper] Pilot exit status: 0
[2026-03-15 09:15:21] 2026-03-15 08:15:17,926 [wrapper] pandaids: 7047462210
[2026-03-15 09:15:21] 2026-03-15 08:15:18,923 [wrapper] cleanup supervisor_pilot   551 5134
[2026-03-15 09:15:21] 2026-03-15 08:15:19,013 [wrapper] Test setup, not cleaning
[2026-03-15 09:15:21] 2026-03-15 08:15:19,100 [wrapper] apfmon messages muted
[2026-03-15 09:15:21] 2026-03-15 08:15:19,215 [wrapper] ==== wrapper stdout END ====
[2026-03-15 09:15:21] 2026-03-15 08:15:19,316 [wrapper] ==== wrapper stderr END ====
[2026-03-15 09:15:21]  *** Error codes and diagnostics ***
[2026-03-15 09:15:21]     "exeErrorCode": 0,
[2026-03-15 09:15:21]     "exeErrorDiag": "",
[2026-03-15 09:15:21]     "pilotErrorCode": 0,
[2026-03-15 09:15:21]     "pilotErrorDiag": "",
[2026-03-15 09:15:21]  *** Listing of results directory ***
[2026-03-15 09:15:21] total 614032
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 09:15:21] -rwx------. 1 boinc boinc     36322 Mar 14 17:41 runpilot2-wrapper.sh
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc      5111 Mar 14 17:43 queuedata.json
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc       100 Mar 15 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 09:15:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 05:28 run_atlas
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc       105 Mar 15 05:28 job.xml
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc      6392 Mar 15 05:28 init_data.xml
[2026-03-15 09:15:21] -rw-r--r--. 2 boinc boinc 437573657 Mar 15 05:28 EVNT.46701403._001974.pool.root.1
[2026-03-15 09:15:21] -rw-r--r--. 2 boinc boinc     15845 Mar 15 05:28 start_atlas.sh
[2026-03-15 09:15:21] drwxrwx--x. 2 boinc boinc        68 Mar 15 05:28 shared
[2026-03-15 09:15:21] -rw-r--r--. 2 boinc boinc    597531 Mar 15 05:28 input.tar.gz
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc         0 Mar 15 05:28 boinc_lockfile
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc      2564 Mar 15 05:29 pandaJob.out
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc       415 Mar 15 05:33 workernode_map.json
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc   1006481 Mar 15 05:33 agis_schedconf.cvmfs.json
[2026-03-15 09:15:21] drwx------. 5 boinc boinc      4096 Mar 15 05:33 pilot3
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc 182620883 Mar 15 09:12 HITS.48955010._047481.pool.root.1
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc       532 Mar 15 09:13 boinc_task_state.xml
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc        95 Mar 15 09:14 pilot_heartbeat.json
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc      1017 Mar 15 09:14 memory_monitor_summary.json
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc   1511579 Mar 15 09:14 agis_ddmendpoints.agis.ALL.json
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc    471840 Mar 15 09:14 log.48955010._047481.job.log.tgz.1
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc      6326 Mar 15 09:14 heartbeat.json
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc      8192 Mar 15 09:14 boinc_mmap_file
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc        28 Mar 15 09:14 wrapper_checkpoint.txt
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc      4880 Mar 15 09:15 pilotlog.txt
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc   1850807 Mar 15 09:15 log.48955010._047481.job.log.1
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc       357 Mar 15 09:15 output.list
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc       620 Mar 15 09:15 runtime_log
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc   2344960 Mar 15 09:15 result.tar.gz
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc      8832 Mar 15 09:15 runtime_log.err
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc       655 Mar 15 09:15 LhjKDmvEhL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1atLDmaOQDYn.diag
[2026-03-15 09:15:21] -rw-r--r--. 1 boinc boinc     20925 Mar 15 09:15 stderr.txt
[2026-03-15 09:15:21] HITS file was successfully produced:
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc 182620883 Mar 15 09:12 shared/HITS.pool.root.1
[2026-03-15 09:15:21]  *** Contents of shared directory: ***
[2026-03-15 09:15:21] total 608556
[2026-03-15 09:15:21] -rw-r--r--. 2 boinc boinc 437573657 Mar 15 05:28 ATLAS.root_0
[2026-03-15 09:15:21] -rw-r--r--. 2 boinc boinc     15845 Mar 15 05:28 start_atlas.sh
[2026-03-15 09:15:21] -rw-r--r--. 2 boinc boinc    597531 Mar 15 05:28 input.tar.gz
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc 182620883 Mar 15 09:12 HITS.pool.root.1
[2026-03-15 09:15:21] -rw-------. 1 boinc boinc   2344960 Mar 15 09:15 result.tar.gz
09:15:23 (1388): run_atlas exited; CPU time 49703.417546
09:15:23 (1388): called boinc_finish(0)

</stderr_txt>
]]>

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