Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:34:18 (3394): wrapper (7.7.26015): starting
19:34:18 (3394): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 19:34:18] Arguments: --nthreads 12
[2026-03-14 19:34:18] Threads: 12
[2026-03-14 19:34:18] Checking for CVMFS
[2026-03-14 19:34:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 19:34:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 19:34:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 19:34:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 19:34:18] 2.11.2.0 2913 443868 93896 157295 0 50 19471707 20275201 1 130560 1 192715764 99.951 25922111 16980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 19:34:18] CVMFS is ok
[2026-03-14 19:34:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 19:34:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 19:34:18] Further information can be found at the LHC@home message board.
[2026-03-14 19:34:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 19:34:18] Checking for apptainer binary...
[2026-03-14 19:34:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 19:34:18] Running /usr/bin/apptainer --version
[2026-03-14 19:34:18] apptainer version 1.3.2-1.el7
[2026-03-14 19:34:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 19:34:20] c-205-6.aglt2.org
[2026-03-14 19:34:20] apptainer works
[2026-03-14 19:34:20] Set ATHENA_PROC_NUMBER=12
[2026-03-14 19:34:20] Set ATHENA_CORE_NUMBER=12
[2026-03-14 19:34:20] Starting ATLAS job with PandaID=7047778910
[2026-03-14 19:34:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 20:44:53]  *** The last 200 lines of the pilot log: ***
[2026-03-14 20:44:53]  guid=fa10e84c-9809-4c76-9741-794d5a34add1
[2026-03-14 20:44:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 20:44:53]  is_altstaged=None
[2026-03-14 20:44:53]  is_tar=False
[2026-03-14 20:44:53]  lfn=log.48955010._050749.job.log.tgz.1
[2026-03-14 20:44:53]  mtime=0
[2026-03-14 20:44:53]  protocol_id=None
[2026-03-14 20:44:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 20:44:53]  replicas=None
[2026-03-14 20:44:53]  scope=mc23_13p6TeV
[2026-03-14 20:44:53]  status=None
[2026-03-14 20:44:53]  status_code=0
[2026-03-14 20:44:53]  storage_token=
[2026-03-14 20:44:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7047778910/log.48955010._050749.job.log.tgz.1
[2026-03-14 20:44:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/1d/log.48955010._050749.job.log.tgz.1
[2026-03-14 20:44:53]  workdir=None
[2026-03-14 20:44:53] ]
[2026-03-14 20:44:53] 2026-03-15 00:44:16,034 | INFO     | transferring file log.48955010._050749.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7047778910/log.48955010._050749.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 20:44:53] 2026-03-15 00:44:16,035 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7047778910/log.48955010._050749.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._050749.job
[2026-03-14 20:44:53] 2026-03-15 00:44:16,056 | INFO     | adding to output.list: log.48955010._050749.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/1d/log.48955010._050749.job.log.tg
[2026-03-14 20:44:53] 2026-03-15 00:44:16,057 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 20:44:53] 2026-03-15 00:44:16,057 | INFO     | summary of transferred files:
[2026-03-14 20:44:53] 2026-03-15 00:44:16,057 | INFO     |  -- lfn=log.48955010._050749.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 20:44:53] 2026-03-15 00:44:16,058 | INFO     | stage-out finished correctly
[2026-03-14 20:44:53] 2026-03-15 00:44:16,515 | INFO     | monitor loop #318: job 0:7047778910 is in state 'finished'
[2026-03-14 20:44:53] 2026-03-15 00:44:16,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 20:44:53] 2026-03-15 00:44:16,651 | INFO     | time since job start (4176s) is within the limit (345600.0s)
[2026-03-14 20:44:53] 2026-03-15 00:44:18,656 | INFO     | time since job start (4178s) is within the limit (345600.0s)
[2026-03-14 20:44:53] 2026-03-15 00:44:18,965 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 20:44:53] 2026-03-15 00:44:19,024 | INFO     | monitor loop #319: job 0:7047778910 is in state 'finished'
[2026-03-14 20:44:53] 2026-03-15 00:44:19,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,060 | INFO     | job 7047778910 has state=finished
[2026-03-14 20:44:53] 2026-03-15 00:44:19,060 | INFO     | preparing for final server update for job 7047778910 in state='finished'
[2026-03-14 20:44:53] 2026-03-15 00:44:19,060 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7047778910/jobReport.json
[2026-03-14 20:44:53] 2026-03-15 00:44:19,065 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 20:44:53] 2026-03-15 00:44:19,065 | INFO     | this job has now completed (state=finished)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,065 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,066 | INFO     | log transfer has been attempted: DONE
[2026-03-14 20:44:53] 2026-03-15 00:44:19,066 | INFO     | job 7047778910 has finished - writing final server update
[2026-03-14 20:44:53] 2026-03-15 00:44:19,066 | INFO     | total number of processed events: 400 (read)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,069 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7047778910/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,069 | INFO     | extracted standard info from prmon json
[2026-03-14 20:44:53] 2026-03-15 00:44:19,070 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 20:44:53] 2026-03-15 00:44:19,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 20:44:53] 2026-03-15 00:44:19,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 20:44:53] 2026-03-15 00:44:19,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 20:44:53] 2026-03-15 00:44:19,072 | INFO     | fitting pss+swap vs Time
[2026-03-14 20:44:53] 2026-03-15 00:44:19,072 | INFO     | sum of square deviations: 70364110.0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,072 | INFO     | sum of deviations: -6298390421.999998
[2026-03-14 20:44:53] 2026-03-15 00:44:19,072 | INFO     | mean x: 1773533439.0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,072 | INFO     | mean y: 2820319.098360656
[2026-03-14 20:44:53] 2026-03-15 00:44:19,072 | INFO     | intersect: 158754292131.84946
[2026-03-14 20:44:53] 2026-03-15 00:44:19,073 | INFO     | chi2: 0.08711269339203287
[2026-03-14 20:44:53] 2026-03-15 00:44:19,073 | INFO     | current memory leak: -89.51 B/s (using 61 data points, chi2=0.09)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,073 | INFO     | could have reported an average CPU frequency of 1718 MHz (6 samples)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,073 | INFO     | ..............................
[2026-03-14 20:44:53] 2026-03-15 00:44:19,073 | INFO     | . Timing measurements:
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . get job = 0 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . initial setup = 7 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . payload setup = 7 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . stage-in = 0 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . payload execution = 4152 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . stage-out = 0 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | . log creation = 0 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,074 | INFO     | ..............................
[2026-03-14 20:44:53] 2026-03-15 00:44:19,150 | INFO     | 
[2026-03-14 20:44:53] 2026-03-15 00:44:19,151 | INFO     | job summary report
[2026-03-14 20:44:53] 2026-03-15 00:44:19,151 | INFO     | --------------------------------------------------
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | PanDA job id: 7047778910
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | task id: 48955010
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | errors: (none)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | pilot state: finished 
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | transexitcode: 0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,152 | INFO     | exeerrorcode: 0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,153 | INFO     | exeerrordiag: 
[2026-03-14 20:44:53] 2026-03-15 00:44:19,153 | INFO     | exitcode: 0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,153 | INFO     | exitmsg: OK
[2026-03-14 20:44:53] 2026-03-15 00:44:19,153 | INFO     | cpuconsumptiontime: 43758 s
[2026-03-14 20:44:53] 2026-03-15 00:44:19,153 | INFO     | nevents: 400
[2026-03-14 20:44:53] 2026-03-15 00:44:19,153 | INFO     | neventsw: 0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,154 | INFO     | pid: 11764
[2026-03-14 20:44:53] 2026-03-15 00:44:19,154 | INFO     | pgrp: 11764
[2026-03-14 20:44:53] 2026-03-15 00:44:19,154 | INFO     | corecount: 12
[2026-03-14 20:44:53] 2026-03-15 00:44:19,154 | INFO     | event service: False
[2026-03-14 20:44:53] 2026-03-15 00:44:19,154 | INFO     | sizes: {0: 2279695, 1: 2280156, 11: 2280156, 4163: 2306040, 4164: 2315038, 4167: 2315416}
[2026-03-14 20:44:53] 2026-03-15 00:44:19,154 | INFO     | --------------------------------------------------
[2026-03-14 20:44:53] 2026-03-15 00:44:19,155 | INFO     | 
[2026-03-14 20:44:53] 2026-03-15 00:44:19,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 20:44:53] 2026-03-15 00:44:19,181 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,181 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,181 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,181 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,184 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 20:44:53] 2026-03-15 00:44:19,184 | INFO     | job 7047778910 has completed (purged errors)
[2026-03-14 20:44:53] 2026-03-15 00:44:19,185 | INFO     | overall cleanup function is called
[2026-03-14 20:44:53] 2026-03-15 00:44:20,193 | INFO     | --- collectZombieJob: --- 10, [11764]
[2026-03-14 20:44:53] 2026-03-15 00:44:20,193 | INFO     | zombie collector waiting for pid 11764
[2026-03-14 20:44:53] 2026-03-15 00:44:20,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 20:44:53] 2026-03-15 00:44:20,194 | INFO     | collected zombie processes
[2026-03-14 20:44:53] 2026-03-15 00:44:20,194 | INFO     | will attempt to kill all subprocesses of pid=11764
[2026-03-14 20:44:53] 2026-03-15 00:44:20,279 | INFO     | process IDs to be killed: [11764] (in reverse order)
[2026-03-14 20:44:53] 2026-03-15 00:44:20,330 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 20:44:53] 2026-03-15 00:44:20,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 20:44:53] 2026-03-15 00:44:20,334 | INFO     | did not find any defunct processes belonging to 11764
[2026-03-14 20:44:53] 2026-03-15 00:44:20,338 | INFO     | did not find any defunct processes belonging to 11764
[2026-03-14 20:44:53] 2026-03-15 00:44:20,338 | INFO     | ready for new job
[2026-03-14 20:44:53] 2026-03-15 00:44:20,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 20:44:53] 2026-03-15 00:44:20,340 | INFO     | **************************************
[2026-03-14 20:44:53] 2026-03-15 00:44:20,340 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 20:44:53] 2026-03-15 00:44:20,340 | INFO     | **************************************
[2026-03-14 20:44:53] 2026-03-15 00:44:20,340 | INFO     | 
[2026-03-14 20:44:53] 2026-03-15 00:44:20,341 | INFO     | architecture information:
[2026-03-14 20:44:53] 2026-03-15 00:44:20,341 | INFO     | executing command: cat /etc/os-release
[2026-03-14 20:44:53] 2026-03-15 00:44:20,357 | INFO     | cat /etc/os-release:
[2026-03-14 20:44:53] NAME="CentOS Linux"
[2026-03-14 20:44:53] VERSION="7 (Core)"
[2026-03-14 20:44:53] ID="centos"
[2026-03-14 20:44:53] ID_LIKE="rhel fedora"
[2026-03-14 20:44:53] VERSION_ID="7"
[2026-03-14 20:44:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 20:44:53] ANSI_COLOR="0;31"
[2026-03-14 20:44:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 20:44:53] HOME_URL="https://www.centos.org/"
[2026-03-14 20:44:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 20:44:53] 
[2026-03-14 20:44:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 20:44:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 20:44:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 20:44:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 20:44:53] 
[2026-03-14 20:44:53] 2026-03-15 00:44:20,358 | INFO     | **************************************
[2026-03-14 20:44:53] 2026-03-15 00:44:20,861 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 20:44:53] 2026-03-15 00:44:20,878 | INFO     | sufficient remaining disk space (28899803136 B)
[2026-03-14 20:44:53] 2026-03-15 00:44:20,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 20:44:53] 2026-03-15 00:44:20,879 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 20:44:53] 2026-03-15 00:44:20,879 | INFO     | update_server=False
[2026-03-14 20:44:53] 2026-03-15 00:44:20,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 20:44:53] 2026-03-15 00:44:20,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:44:53] 2026-03-15 00:44:20,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 20:44:53] 2026-03-15 00:44:20,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:44:53] 2026-03-15 00:44:20,881 | INFO     | aborting loop
[2026-03-14 20:44:53] 2026-03-15 00:44:21,460 | INFO     | all data control threads have been joined
[2026-03-14 20:44:53] 2026-03-15 00:44:21,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 20:44:53] 2026-03-15 00:44:21,885 | INFO     | [job] retrieve thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:21,885 | INFO     | [job] queue monitor thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:21,886 | INFO     | [job] job monitor thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:21,908 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:21,925 | INFO     | all job control threads have been joined
[2026-03-14 20:44:53] 2026-03-15 00:44:21,966 | INFO     | [payload] validate_post thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:22,046 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:22,064 | INFO     | [payload] failed_post thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:22,176 | INFO     | all payload control threads have been joined
[2026-03-14 20:44:53] 2026-03-15 00:44:22,335 | INFO     | [data] copytool_in thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:22,465 | INFO     | [data] control thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:22,931 | INFO     | [job] control thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:23,010 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:23,123 | INFO     | [job] validate thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:23,182 | INFO     | [payload] control thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:23,660 | INFO     | [data] copytool_out thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:24,886 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:31,212 | INFO     | job.realtimelogging is not enabled
[2026-03-14 20:44:53] 2026-03-15 00:44:32,218 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 20:44:53] 2026-03-15 00:44:46,963 | INFO     | [monitor] cgroup control has ended
[2026-03-14 20:44:53] 2026-03-15 00:44:48,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903538603840)>', '<ExcThread(monitor, started 139902511474432)>']
[2026-03-14 20:44:53] 2026-03-15 00:44:51,862 | INFO     | PID=7388 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 20:44:53] 2026-03-15 00:44:51,863 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 20:44:53] 2026-03-15 00:44:51,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 20:44:53] 2026-03-15 00:44:51,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 20:44:53] 2026-03-15 00:44:51,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 20:44:53] 2026-03-15 00:44:51,863 | INFO     | [monitor] control thread has ended
[2026-03-14 20:44:53] 2026-03-15 00:44:53,467 | INFO     | all workflow threads have been joined
[2026-03-14 20:44:53] 2026-03-15 00:44:53,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 20:44:53] 2026-03-15 00:44:53,467 | INFO     | traces error code: 0
[2026-03-14 20:44:53] 2026-03-15 00:44:53,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 20:44:53] 2026-03-15 00:44:53,562 [wrapper] ==== pilot stdout END ====
[2026-03-14 20:44:53] 2026-03-15 00:44:53,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 20:44:53] 2026-03-15 00:44:53,569 [wrapper] pilotpid: 7388
[2026-03-14 20:44:53] 2026-03-15 00:44:53,573 [wrapper] Pilot exit status: 0
[2026-03-14 20:44:53] 2026-03-15 00:44:53,589 [wrapper] pandaids: 7047778910
[2026-03-14 20:44:53] 2026-03-15 00:44:53,627 [wrapper] cleanup supervisor_pilot 30047 7389
[2026-03-14 20:44:53] 2026-03-15 00:44:53,631 [wrapper] Test setup, not cleaning
[2026-03-14 20:44:53] 2026-03-15 00:44:53,635 [wrapper] apfmon messages muted
[2026-03-14 20:44:53] 2026-03-15 00:44:53,639 [wrapper] ==== wrapper stdout END ====
[2026-03-14 20:44:53] 2026-03-15 00:44:53,643 [wrapper] ==== wrapper stderr END ====
[2026-03-14 20:44:53]  *** Error codes and diagnostics ***
[2026-03-14 20:44:53]     "exeErrorCode": 0,
[2026-03-14 20:44:53]     "exeErrorDiag": "",
[2026-03-14 20:44:53]     "pilotErrorCode": 0,
[2026-03-14 20:44:53]     "pilotErrorDiag": "",
[2026-03-14 20:44:53]  *** Listing of results directory ***
[2026-03-14 20:44:53] total 617268
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 15:45 pilot3.tar.gz
[2026-03-14 20:44:53] -rwx------ 1 boincer umatlas     36322 Mar 14 15:45 runpilot2-wrapper.sh
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 15:47 queuedata.json
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas       100 Mar 14 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 20:44:53] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 19:34 run_atlas
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas       105 Mar 14 19:34 job.xml
[2026-03-14 20:44:53] -rw-r--r-- 2 boincer umatlas 439127233 Mar 14 19:34 EVNT.46701403._001372.pool.root.1
[2026-03-14 20:44:53] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 19:34 start_atlas.sh
[2026-03-14 20:44:53] drwxrwx--x 2 boincer umatlas      4096 Mar 14 19:34 shared
[2026-03-14 20:44:53] -rw-r--r-- 2 boincer umatlas    597521 Mar 14 19:34 input.tar.gz
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas         0 Mar 14 19:34 boinc_lockfile
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas      2563 Mar 14 19:34 pandaJob.out
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas        57 Mar 14 19:34 setup.sh.local
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas   1006481 Mar 14 19:34 agis_schedconf.cvmfs.json
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas   1511579 Mar 14 19:34 agis_ddmendpoints.agis.ALL.json
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas       432 Mar 14 19:34 workernode_map.json
[2026-03-14 20:44:53] drwx------ 5 boincer umatlas      4096 Mar 14 19:34 pilot3
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 20:36 init_data.xml
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas 187022528 Mar 14 20:43 HITS.48955010._050749.pool.root.1
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas       531 Mar 14 20:44 boinc_task_state.xml
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas      1044 Mar 14 20:44 memory_monitor_summary.json
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas    386542 Mar 14 20:44 log.48955010._050749.job.log.tgz.1
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas      6406 Mar 14 20:44 heartbeat.json
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 20:44 boinc_mmap_file
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas        27 Mar 14 20:44 wrapper_checkpoint.txt
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas        95 Mar 14 20:44 pilot_heartbeat.json
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas      4813 Mar 14 20:44 pilotlog.txt
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas    612031 Mar 14 20:44 log.48955010._050749.job.log.1
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas       357 Mar 14 20:44 output.list
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas       620 Mar 14 20:44 runtime_log
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas   1013760 Mar 14 20:44 result.tar.gz
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas       658 Mar 14 20:44 BlALDml6jL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtarLDmAkCVFm.diag
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 20:44 runtime_log.err
[2026-03-14 20:44:53] -rw-r--r-- 1 boincer umatlas     21360 Mar 14 20:44 stderr.txt
[2026-03-14 20:44:53] HITS file was successfully produced:
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas 187022528 Mar 14 20:43 shared/HITS.pool.root.1
[2026-03-14 20:44:53]  *** Contents of shared directory: ***
[2026-03-14 20:44:53] total 613072
[2026-03-14 20:44:53] -rw-r--r-- 2 boincer umatlas 439127233 Mar 14 19:34 ATLAS.root_0
[2026-03-14 20:44:53] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 19:34 start_atlas.sh
[2026-03-14 20:44:53] -rw-r--r-- 2 boincer umatlas    597521 Mar 14 19:34 input.tar.gz
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas 187022528 Mar 14 20:43 HITS.pool.root.1
[2026-03-14 20:44:53] -rw------- 1 boincer umatlas   1013760 Mar 14 20:44 result.tar.gz
20:44:55 (3394): run_atlas exited; CPU time 43746.477932
20:44:55 (3394): called boinc_finish(0)

</stderr_txt>
]]>

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