Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:09:41 (1033299): wrapper (7.7.26015): starting
16:09:41 (1033299): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 16:09:41] Arguments: --nthreads 12
[2026-03-14 16:09:41] Threads: 12
[2026-03-14 16:09:41] Checking for CVMFS
[2026-03-14 16:09:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 16:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 16:09:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 16:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 16:09:42] 2.11.5.0 527984 149358 307328 157293 1 119 44798699 45568001 18897 130560 0 1362465622 99.834 688022200 20115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-14 16:09:42] CVMFS is ok
[2026-03-14 16:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 16:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 16:09:42] Further information can be found at the LHC@home message board.
[2026-03-14 16:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:09:42] Checking for apptainer binary...
[2026-03-14 16:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 16:09:42] Running /usr/bin/apptainer --version
[2026-03-14 16:09:42] apptainer version 1.4.1-1.el9
[2026-03-14 16:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:09:42] wns0069.triumf.lcg
[2026-03-14 16:09:42] apptainer works
[2026-03-14 16:09:42] Set ATHENA_PROC_NUMBER=12
[2026-03-14 16:09:42] Set ATHENA_CORE_NUMBER=12
[2026-03-14 16:09:42] Starting ATLAS job with PandaID=7049297317
[2026-03-14 16:09:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 16:14:39]  *** The last 200 lines of the pilot log: ***
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | wrong length of table data, x=[1773529871.0], y=[1177.0] (must be same and length>=4)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,759 | INFO     | could have reported an average CPU frequency of 2571 MHz (4 samples)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | ..............................
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . Timing measurements:
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . get job = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . initial setup = 21 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . payload setup = 16 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . stage-in = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . payload execution = 49 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . stage-out = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . log creation = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | ..............................
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049297317/pilotlog.txt
[2026-03-14 16:14:39] 2026-03-14 23:13:44,912 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-14 16:14:39] - Log from pilotlog.txt -
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7049297317/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | INFO     | extracted standard info from prmon json
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | wrong length of table data, x=[1773529871.0], y=[1177.0] (must be same and length>=4)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,759 | INFO     | could have reported an average CPU frequency of 2571 MHz (4 samples)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | ..............................
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . Timing measurements:
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . get job = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . initial setup = 21 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . payload setup = 16 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . stage-in = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . payload execution = 49 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . stage-out = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . log creation = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | ..............................
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049297317/pilotlog.txt
[2026-03-14 16:14:39] 2026-03-14 23:13:44,912 | WARNING  | 
[2026-03-14 16:14:39] [begin log extracts]
[2026-03-14 16:14:39] - Log from pilotlog.txt -
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7049297317/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | INFO     | extracted standard info from prmon json
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 16:14:39] 2026-03-14 23:13:44,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 16:14:39] 2026-03-14 23:13:44,753 | WARNING  | wrong length of table data, x=[1773529871.0], y=[1177.0] (must be same and length>=4)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,759 | INFO     | could have reported an average CPU frequency of 2571 MHz (4 samples)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | ..............................
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . Timing measurements:
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . get job = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . initial setup = 21 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . payload setup = 16 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . stage-in = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . payload execution = 49 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . stage-out = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | . log creation = 0 s
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | ..............................
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 16:14:39] 2026-03-14 23:13:44,760 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7049297317/pilotlog.txt
[2026-03-14 16:14:39] [end log extracts]
[2026-03-14 16:14:39] 2026-03-14 23:13:44,912 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-14 16:14:39] 2026-03-14 23:13:44,913 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-14 16:14:39] 2026-03-14 23:13:45,118 | INFO     | 
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | job summary report
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | --------------------------------------------------
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | PanDA job id: 7049297317
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | task id: 48955006
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-14 16:11:38,745 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | pilot state: failed 
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | transexitcode: 65
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | exeerrorcode: 65
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | exitcode: 65
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | cpuconsumptiontime: 14 s
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | nevents: 0
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | neventsw: 0
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | pid: 1041871
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | pgrp: 1041871
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | corecount: 12
[2026-03-14 16:14:39] 2026-03-14 23:13:45,119 | INFO     | event service: False
[2026-03-14 16:14:39] 2026-03-14 23:13:45,120 | INFO     | sizes: {0: 2279091, 1: 2279773, 2: 2279801, 3: 2280262, 71: 2303506, 72: 2308014, 189: 2308152}
[2026-03-14 16:14:39] 2026-03-14 23:13:45,120 | INFO     | --------------------------------------------------
[2026-03-14 16:14:39] 2026-03-14 23:13:45,120 | INFO     | 
[2026-03-14 16:14:39] 2026-03-14 23:13:45,120 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-14 16:14:39] 2026-03-14 23:13:45,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 16:14:39] 2026-03-14 23:13:45,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,408 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 16:14:39] 2026-03-14 23:13:45,408 | INFO     | job 7049297317 has completed (purged errors)
[2026-03-14 16:14:39] 2026-03-14 23:13:45,408 | INFO     | overall cleanup function is called
[2026-03-14 16:14:39] 2026-03-14 23:13:46,413 | INFO     | --- collectZombieJob: --- 10, [1041871]
[2026-03-14 16:14:39] 2026-03-14 23:13:46,414 | INFO     | zombie collector waiting for pid 1041871
[2026-03-14 16:14:39] 2026-03-14 23:13:46,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 16:14:39] 2026-03-14 23:13:46,414 | INFO     | collected zombie processes
[2026-03-14 16:14:39] 2026-03-14 23:13:46,414 | INFO     | will attempt to kill all subprocesses of pid=1041871
[2026-03-14 16:14:39] 2026-03-14 23:13:47,209 | INFO     | process IDs to be killed: [1041871] (in reverse order)
[2026-03-14 16:14:39] 2026-03-14 23:13:47,479 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 16:14:39] 2026-03-14 23:13:47,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 16:14:39] 2026-03-14 23:13:47,555 | INFO     | did not find any defunct processes belonging to 1041871
[2026-03-14 16:14:39] 2026-03-14 23:13:47,593 | INFO     | did not find any defunct processes belonging to 1041871
[2026-03-14 16:14:39] 2026-03-14 23:13:47,593 | INFO     | ready for new job
[2026-03-14 16:14:39] 2026-03-14 23:13:47,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 16:14:39] 2026-03-14 23:13:47,614 | INFO     | **************************************
[2026-03-14 16:14:39] 2026-03-14 23:13:47,615 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 16:14:39] 2026-03-14 23:13:47,615 | INFO     | **************************************
[2026-03-14 16:14:39] 2026-03-14 23:13:47,615 | INFO     | 
[2026-03-14 16:14:39] 2026-03-14 23:13:47,617 | INFO     | architecture information:
[2026-03-14 16:14:39] 2026-03-14 23:13:47,624 | INFO     | executing command: cat /etc/os-release
[2026-03-14 16:14:39] 2026-03-14 23:13:47,708 | INFO     | cat /etc/os-release:
[2026-03-14 16:14:39] NAME="CentOS Linux"
[2026-03-14 16:14:39] VERSION="7 (Core)"
[2026-03-14 16:14:39] ID="centos"
[2026-03-14 16:14:39] ID_LIKE="rhel fedora"
[2026-03-14 16:14:39] VERSION_ID="7"
[2026-03-14 16:14:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 16:14:39] ANSI_COLOR="0;31"
[2026-03-14 16:14:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 16:14:39] HOME_URL="https://www.centos.org/"
[2026-03-14 16:14:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 16:14:39] 
[2026-03-14 16:14:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 16:14:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 16:14:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 16:14:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 16:14:39] 
[2026-03-14 16:14:39] 2026-03-14 23:13:47,708 | INFO     | **************************************
[2026-03-14 16:14:39] 2026-03-14 23:13:48,212 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-14 16:14:39] 2026-03-14 23:13:48,296 | INFO     | sufficient remaining disk space (1202020417536 B)
[2026-03-14 16:14:39] 2026-03-14 23:13:48,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 16:14:39] 2026-03-14 23:13:48,296 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 16:14:39] 2026-03-14 23:13:48,297 | INFO     | update_server=False
[2026-03-14 16:14:39] 2026-03-14 23:13:48,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 16:14:39] 2026-03-14 23:13:48,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 16:14:39] 2026-03-14 23:13:48,800 | INFO     | all data control threads have been joined
[2026-03-14 16:14:39] 2026-03-14 23:13:48,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 16:14:39] 2026-03-14 23:13:48,854 | INFO     | aborting loop
[2026-03-14 16:14:39] 2026-03-14 23:13:48,871 | INFO     | all job control threads have been joined
[2026-03-14 16:14:39] 2026-03-14 23:13:49,212 | INFO     | all payload control threads have been joined
[2026-03-14 16:14:39] 2026-03-14 23:13:49,302 | INFO     | [job] retrieve thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,648 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,667 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,721 | INFO     | [payload] validate_post thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,810 | INFO     | [data] control thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,840 | INFO     | [data] copytool_in thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,861 | INFO     | [job] job monitor thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:49,876 | INFO     | [job] control thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:50,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 16:14:39] 2026-03-14 23:13:50,218 | INFO     | [payload] control thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:50,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:50,331 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:50,612 | INFO     | [payload] failed_post thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:50,660 | INFO     | [data] copytool_out thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:50,765 | INFO     | [job] validate thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:51,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 16:14:39] 2026-03-14 23:13:51,183 | INFO     | [job] queue monitor thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:13:55,095 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 16:14:39] 2026-03-14 23:14:17,359 | INFO     | PID=1037072 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 16:14:39] 2026-03-14 23:14:17,359 | INFO     | .. there are 28 such processes running
[2026-03-14 16:14:39] 2026-03-14 23:14:17,361 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 16:14:39] 2026-03-14 23:14:17,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 16:14:39] 2026-03-14 23:14:17,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 16:14:39] 2026-03-14 23:14:32,480 | INFO     | [monitor] cgroup control has ended
[2026-03-14 16:14:39] 2026-03-14 23:14:33,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168593844032)>', '<ExcThread(monitor, started 140168061249280)>']
[2026-03-14 16:14:39] 2026-03-14 23:14:33,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 16:14:39] 2026-03-14 23:14:33,464 | INFO     | [monitor] control thread has ended
[2026-03-14 16:14:39] 2026-03-14 23:14:38,286 | INFO     | all workflow threads have been joined
[2026-03-14 16:14:39] 2026-03-14 23:14:38,287 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 16:14:39] 2026-03-14 23:14:38,287 | INFO     | traces error code: 0
[2026-03-14 16:14:39] 2026-03-14 23:14:38,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 16:14:39] 2026-03-14 23:14:38,435 [wrapper] ==== pilot stdout END ====
[2026-03-14 16:14:39] 2026-03-14 23:14:38,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 16:14:39] 2026-03-14 23:14:38,460 [wrapper] pilotpid: 1037072
[2026-03-14 16:14:39] 2026-03-14 23:14:38,463 [wrapper] Pilot exit status: 0
[2026-03-14 16:14:39] 2026-03-14 23:14:38,501 [wrapper] pandaids: 7049297317
[2026-03-14 16:14:39] 2026-03-14 23:14:38,702 [wrapper] cleanup supervisor_pilot 1037078 1037073
[2026-03-14 16:14:39] 2026-03-14 23:14:38,720 [wrapper] Test setup, not cleaning
[2026-03-14 16:14:39] 2026-03-14 23:14:38,773 [wrapper] apfmon messages muted
[2026-03-14 16:14:39] 2026-03-14 23:14:38,790 [wrapper] ==== wrapper stdout END ====
[2026-03-14 16:14:39] 2026-03-14 23:14:38,838 [wrapper] ==== wrapper stderr END ====
[2026-03-14 16:14:39]  *** Error codes and diagnostics ***
[2026-03-14 16:14:39]     "exeErrorCode": 65,
[2026-03-14 16:14:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-14 16:14:39]     "pilotErrorCode": 1305,
[2026-03-14 16:14:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-14 16:14:39]  *** Listing of results directory ***
[2026-03-14 16:14:39] total 439544
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 12:43 queuedata.json
[2026-03-14 16:14:39] -rwx------. 1 boinc boinc     36322 Mar 14 12:44 runpilot2-wrapper.sh
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 12:45 pilot3.tar.gz
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc       100 Mar 14 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 16:14:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 16:09 run_atlas
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc       105 Mar 14 16:09 job.xml
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc      6594 Mar 14 16:09 init_data.xml
[2026-03-14 16:14:39] -rw-r--r--. 2 boinc boinc 445951218 Mar 14 16:09 EVNT.46701403._000830.pool.root.1
[2026-03-14 16:14:39] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:09 start_atlas.sh
[2026-03-14 16:14:39] drwxrwx--x. 2 boinc boinc      4096 Mar 14 16:09 shared
[2026-03-14 16:14:39] -rw-r--r--. 2 boinc boinc    597536 Mar 14 16:09 input.tar.gz
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:09 boinc_lockfile
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc      2564 Mar 14 16:09 pandaJob.out
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc   1006481 Mar 14 16:10 agis_schedconf.cvmfs.json
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc   1511579 Mar 14 16:10 agis_ddmendpoints.agis.ALL.json
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc       445 Mar 14 16:10 workernode_map.json
[2026-03-14 16:14:39] drwx------. 5 boinc boinc      4096 Mar 14 16:10 pilot3
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc       524 Mar 14 16:11 boinc_task_state.xml
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc       986 Mar 14 16:11 memory_monitor_summary.json
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc     21629 Mar 14 16:11 log.48955006._051680.job.log.tgz.1
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc      7061 Mar 14 16:13 heartbeat.json
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc        95 Mar 14 16:14 pilot_heartbeat.json
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc        22 Mar 14 16:14 wrapper_checkpoint.txt
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc      8192 Mar 14 16:14 boinc_mmap_file
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc      4819 Mar 14 16:14 pilotlog.txt
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc     85237 Mar 14 16:14 log.48955006._051680.job.log.1
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc       188 Mar 14 16:14 output.list
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc       620 Mar 14 16:14 runtime_log
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc    122880 Mar 14 16:14 result.tar.gz
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc       647 Mar 14 16:14 yuvKDm15jL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOTrLDman5wbm.diag
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc      8635 Mar 14 16:14 runtime_log.err
[2026-03-14 16:14:39] -rw-r--r--. 1 boinc boinc     21779 Mar 14 16:14 stderr.txt
[2026-03-14 16:14:39] No HITS result produced
[2026-03-14 16:14:39]  *** Contents of shared directory: ***
[2026-03-14 16:14:39] total 436224
[2026-03-14 16:14:39] -rw-r--r--. 2 boinc boinc 445951218 Mar 14 16:09 ATLAS.root_0
[2026-03-14 16:14:39] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:09 start_atlas.sh
[2026-03-14 16:14:39] -rw-r--r--. 2 boinc boinc    597536 Mar 14 16:09 input.tar.gz
[2026-03-14 16:14:39] -rw-------. 1 boinc boinc    122880 Mar 14 16:14 result.tar.gz
16:14:41 (1033299): run_atlas exited; CPU time 20.690779
16:14:41 (1033299): called boinc_finish(0)

</stderr_txt>
]]>

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