Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:09 (2541715): wrapper (7.7.26015): starting
18:22:09 (2541715): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 18:22:09] Arguments: --nthreads 8
[2026-03-14 18:22:09] Threads: 8
[2026-03-14 18:22:09] Checking for CVMFS
[2026-03-14 18:22:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:22:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:22:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:22:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:22:12] 2.13.3.0 12161 186164 358156 157292 2 76 29824629 40960001 25312 16776704 0 500226147 99.585 568664805 37180 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-14 18:22:12] CVMFS is ok
[2026-03-14 18:22:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:22:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:22:12] Further information can be found at the LHC@home message board.
[2026-03-14 18:22:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:22:12] Checking for apptainer binary...
[2026-03-14 18:22:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:22:12] Running /usr/bin/apptainer --version
[2026-03-14 18:22:12] apptainer version 1.4.5-2.el9
[2026-03-14 18:22:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:22:13] c6-5-7-1.aglt2.org
[2026-03-14 18:22:13] apptainer works
[2026-03-14 18:22:13] Set ATHENA_PROC_NUMBER=8
[2026-03-14 18:22:13] Set ATHENA_CORE_NUMBER=8
[2026-03-14 18:22:14] Starting ATLAS job with PandaID=7055004675
[2026-03-14 18:22:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:20:11 (3793396): wrapper (7.7.26015): starting
01:20:11 (3793396): wrapper: running run_atlas (--nthreads 11)
[2026-03-15 01:20:11] Arguments: --nthreads 11
[2026-03-15 01:20:11] Threads: 11
[2026-03-15 01:20:11] This job has been restarted, cleaning up previous attempt
[2026-03-15 01:20:11] Checking for CVMFS
[2026-03-15 01:20:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 01:20:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 01:20:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 01:20:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 01:20:12] 2.13.3.0 12161 186582 362420 157303 1 173 35207668 40960000 24402 16776704 0 501254252 99.585 569706591 37177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-15 01:20:12] CVMFS is ok
[2026-03-15 01:20:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 01:20:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 01:20:12] Further information can be found at the LHC@home message board.
[2026-03-15 01:20:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 01:20:12] Checking for apptainer binary...
[2026-03-15 01:20:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 01:20:12] Running /usr/bin/apptainer --version
[2026-03-15 01:20:12] apptainer version 1.4.5-2.el9
[2026-03-15 01:20:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 01:20:12] c6-5-7-1.aglt2.org
[2026-03-15 01:20:12] apptainer works
[2026-03-15 01:20:12] Set ATHENA_PROC_NUMBER=11
[2026-03-15 01:20:12] Set ATHENA_CORE_NUMBER=11
[2026-03-15 01:20:12] Starting ATLAS job with PandaID=7055004675
[2026-03-15 01:20:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:33:10]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:33:10] 2026-03-15 10:32:35,457 | INFO     | job 7055004675 has finished - writing final server update
[2026-03-15 06:33:10] 2026-03-15 10:32:35,457 | INFO     | total number of processed events: 400 (read)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,540 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7055004675/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,541 | INFO     | extracted standard info from prmon json
[2026-03-15 06:33:10] 2026-03-15 10:32:35,541 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 06:33:10] 2026-03-15 10:32:35,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 06:33:10] 2026-03-15 10:32:35,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 06:33:10] 2026-03-15 10:32:35,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 06:33:10] 2026-03-15 10:32:35,596 | INFO     | fitting pss+swap vs Time
[2026-03-15 06:33:10] 2026-03-15 10:32:35,597 | INFO     | sum of square deviations: 8971951994.605864
[2026-03-15 06:33:10] 2026-03-15 10:32:35,625 | INFO     | sum of deviations: -32369426365.592823
[2026-03-15 06:33:10] 2026-03-15 10:32:35,625 | INFO     | mean x: 1773561385.9641693
[2026-03-15 06:33:10] 2026-03-15 10:32:35,625 | INFO     | mean y: 2715128.4006514656
[2026-03-15 06:33:10] 2026-03-15 10:32:35,625 | INFO     | intersect: 6401452518.250886
[2026-03-15 06:33:10] 2026-03-15 10:32:35,626 | INFO     | chi2: 2.9696023377361436
[2026-03-15 06:33:10] 2026-03-15 10:32:35,635 | INFO     | sum of square deviations: 8540731981.288092
[2026-03-15 06:33:10] 2026-03-15 10:32:35,637 | INFO     | sum of deviations: 9987973141.735096
[2026-03-15 06:33:10] 2026-03-15 10:32:35,637 | INFO     | mean x: 1773561233.47351
[2026-03-15 06:33:10] 2026-03-15 10:32:35,637 | INFO     | mean y: 2729959.9668874172
[2026-03-15 06:33:10] 2026-03-15 10:32:35,637 | INFO     | intersect: -2071364157.9572253
[2026-03-15 06:33:10] 2026-03-15 10:32:35,637 | INFO     | chi2: 1.564686516970994
[2026-03-15 06:33:10] 2026-03-15 10:32:35,638 | INFO     | current chi2=1.564686516970994 (change=47.30989745368323 %)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,638 | INFO     | sum of square deviations: 8123521532.834976
[2026-03-15 06:33:10] 2026-03-15 10:32:35,640 | INFO     | sum of deviations: 9682344296.85524
[2026-03-15 06:33:10] 2026-03-15 10:32:35,640 | INFO     | mean x: 1773561080.976431
[2026-03-15 06:33:10] 2026-03-15 10:32:35,640 | INFO     | mean y: 2729848.6936026937
[2026-03-15 06:33:10] 2026-03-15 10:32:35,640 | INFO     | intersect: -2111159915.5062015
[2026-03-15 06:33:10] 2026-03-15 10:32:35,640 | INFO     | chi2: 1.5648167639383253
[2026-03-15 06:33:10] 2026-03-15 10:32:35,641 | INFO     | current chi2=1.5648167639383253 (change=-0.008324157325989802 %)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,641 | INFO     | right removable region: 296
[2026-03-15 06:33:10] 2026-03-15 10:32:35,641 | INFO     | sum of square deviations: 8540588507.380791
[2026-03-15 06:33:10] 2026-03-15 10:32:35,643 | INFO     | sum of deviations: -84256437471.14899
[2026-03-15 06:33:10] 2026-03-15 10:32:35,643 | INFO     | mean x: 1773561538.4801323
[2026-03-15 06:33:10] 2026-03-15 10:32:35,643 | INFO     | mean y: 2733351.7251655627
[2026-03-15 06:33:10] 2026-03-15 10:32:35,643 | INFO     | intersect: 17499651361.42028
[2026-03-15 06:33:10] 2026-03-15 10:32:35,644 | INFO     | chi2: 1.5711226270581686
[2026-03-15 06:33:10] 2026-03-15 10:32:35,644 | INFO     | current chi2=1.5711226270581686 (change=47.09316439130017 %)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,644 | INFO     | sum of square deviations: 8123326819.946098
[2026-03-15 06:33:10] 2026-03-15 10:32:35,646 | INFO     | sum of deviations: -85485960757.6801
[2026-03-15 06:33:10] 2026-03-15 10:32:35,646 | INFO     | mean x: 1773561690.986532
[2026-03-15 06:33:10] 2026-03-15 10:32:35,646 | INFO     | mean y: 2733781.32996633
[2026-03-15 06:33:10] 2026-03-15 10:32:35,646 | INFO     | intersect: 18666838830.59665
[2026-03-15 06:33:10] 2026-03-15 10:32:35,647 | INFO     | chi2: 1.548821450598686
[2026-03-15 06:33:10] 2026-03-15 10:32:35,647 | INFO     | current chi2=1.548821450598686 (change=1.419442128539661 %)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,647 | INFO     | left removable region: 20
[2026-03-15 06:33:10] 2026-03-15 10:32:35,647 | INFO     | sum of square deviations: 6519240184.996385
[2026-03-15 06:33:10] 2026-03-15 10:32:35,649 | INFO     | sum of deviations: -33666678742.518085
[2026-03-15 06:33:10] 2026-03-15 10:32:35,649 | INFO     | mean x: 1773561660.4963768
[2026-03-15 06:33:10] 2026-03-15 10:32:35,649 | INFO     | mean y: 2745824.981884058
[2026-03-15 06:33:10] 2026-03-15 10:32:35,649 | INFO     | intersect: 9161778006.584435
[2026-03-15 06:33:10] 2026-03-15 10:32:35,649 | INFO     | chi2: 0.11141000390578594
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | current memory leak: -5.16 B/s (using 276 data points, chi2=0.11)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | could have reported an average CPU frequency of 3098 MHz (14 samples)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | ..............................
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | . Timing measurements:
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | . get job = 0 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | . initial setup = 2 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | . payload setup = 6 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,650 | INFO     | . stage-in = 0 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,651 | INFO     | . payload execution = 18697 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,651 | INFO     | . stage-out = 4 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,651 | INFO     | . log creation = 0 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,651 | INFO     | ..............................
[2026-03-15 06:33:10] 2026-03-15 10:32:35,889 | INFO     | 
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | job summary report
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | --------------------------------------------------
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | PanDA job id: 7055004675
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | task id: 48998032
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | errors: (none)
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | pilot state: finished 
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | transexitcode: 0
[2026-03-15 06:33:10] 2026-03-15 10:32:35,892 | INFO     | exeerrorcode: 0
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | exeerrordiag: 
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | exitcode: 0
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | exitmsg: OK
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | cpuconsumptiontime: 58755 s
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | nevents: 400
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | neventsw: 0
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | pid: 3806164
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | pgrp: 3806164
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | corecount: 11
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | event service: False
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | sizes: {0: 2279975, 1: 2280181, 11: 2280209, 18707: 2312562, 18708: 2312561, 18713: 2321615, 18716: 2321799, 18718: 2321993}
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | --------------------------------------------------
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | 
[2026-03-15 06:33:10] 2026-03-15 10:32:35,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-15 06:33:10] 2026-03-15 10:32:36,005 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,005 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,005 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,005 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,007 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 06:33:10] 2026-03-15 10:32:36,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,007 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 06:33:10] 2026-03-15 10:32:36,007 | INFO     | job 7055004675 has completed (purged errors)
[2026-03-15 06:33:10] 2026-03-15 10:32:36,007 | INFO     | overall cleanup function is called
[2026-03-15 06:33:10] 2026-03-15 10:32:36,250 | INFO     | PID=3800892 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 06:33:10] 2026-03-15 10:32:36,250 | INFO     | .. there are 37 such processes running
[2026-03-15 06:33:10] 2026-03-15 10:32:37,026 | INFO     | --- collectZombieJob: --- 10, [3806164]
[2026-03-15 06:33:10] 2026-03-15 10:32:37,026 | INFO     | zombie collector waiting for pid 3806164
[2026-03-15 06:33:10] 2026-03-15 10:32:37,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 06:33:10] 2026-03-15 10:32:37,026 | INFO     | collected zombie processes
[2026-03-15 06:33:10] 2026-03-15 10:32:37,026 | INFO     | will attempt to kill all subprocesses of pid=3806164
[2026-03-15 06:33:10] 2026-03-15 10:32:37,672 | INFO     | process IDs to be killed: [3806164] (in reverse order)
[2026-03-15 06:33:10] 2026-03-15 10:32:38,025 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 06:33:10] 2026-03-15 10:32:38,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 06:33:10] 2026-03-15 10:32:38,051 | INFO     | did not find any defunct processes belonging to 3806164
[2026-03-15 06:33:10] 2026-03-15 10:32:38,093 | INFO     | did not find any defunct processes belonging to 3806164
[2026-03-15 06:33:10] 2026-03-15 10:32:38,093 | INFO     | ready for new job
[2026-03-15 06:33:10] 2026-03-15 10:32:38,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 06:33:10] 2026-03-15 10:32:38,095 | INFO     | **************************************
[2026-03-15 06:33:10] 2026-03-15 10:32:38,096 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 06:33:10] 2026-03-15 10:32:38,096 | INFO     | **************************************
[2026-03-15 06:33:10] 2026-03-15 10:32:38,096 | INFO     | 
[2026-03-15 06:33:10] 2026-03-15 10:32:38,103 | INFO     | architecture information:
[2026-03-15 06:33:10] 2026-03-15 10:32:38,105 | INFO     | executing command: cat /etc/os-release
[2026-03-15 06:33:10] 2026-03-15 10:32:38,249 | INFO     | cat /etc/os-release:
[2026-03-15 06:33:10] NAME="CentOS Linux"
[2026-03-15 06:33:10] VERSION="7 (Core)"
[2026-03-15 06:33:10] ID="centos"
[2026-03-15 06:33:10] ID_LIKE="rhel fedora"
[2026-03-15 06:33:10] VERSION_ID="7"
[2026-03-15 06:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 06:33:10] ANSI_COLOR="0;31"
[2026-03-15 06:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 06:33:10] HOME_URL="https://www.centos.org/"
[2026-03-15 06:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 06:33:10] 
[2026-03-15 06:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 06:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 06:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 06:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 06:33:10] 
[2026-03-15 06:33:10] 2026-03-15 10:32:38,250 | INFO     | **************************************
[2026-03-15 06:33:10] 2026-03-15 10:32:38,753 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-15 06:33:10] 2026-03-15 10:32:38,865 | INFO     | sufficient remaining disk space (73802973184 B)
[2026-03-15 06:33:10] 2026-03-15 10:32:38,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:33:10] 2026-03-15 10:32:38,865 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:33:10] 2026-03-15 10:32:38,865 | INFO     | update_server=False
[2026-03-15 06:33:10] 2026-03-15 10:32:38,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:33:10] 2026-03-15 10:32:38,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:33:10] 2026-03-15 10:32:38,866 | INFO     | aborting loop
[2026-03-15 06:33:10] 2026-03-15 10:32:38,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:33:10] 2026-03-15 10:32:39,114 | INFO     | all job control threads have been joined
[2026-03-15 06:33:10] 2026-03-15 10:32:39,503 | INFO     | all data control threads have been joined
[2026-03-15 06:33:10] 2026-03-15 10:32:39,807 | INFO     | all payload control threads have been joined
[2026-03-15 06:33:10] 2026-03-15 10:32:39,871 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:39,872 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:39,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:33:10] 2026-03-15 10:32:39,980 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:39,992 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,120 | INFO     | [job] control thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,351 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,485 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,510 | INFO     | [data] control thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,681 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,813 | INFO     | [payload] control thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:33:10] 2026-03-15 10:32:40,873 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:40,922 | INFO     | [job] validate thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:41,203 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:41,244 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:41,832 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:32:43,904 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:33:10] 2026-03-15 10:33:02,124 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:33:10] 2026-03-15 10:33:03,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864706770752)>', '<ExcThread(monitor, started 139863999379200)>']
[2026-03-15 06:33:10] 2026-03-15 10:33:08,981 | INFO     | all workflow threads have been joined
[2026-03-15 06:33:10] 2026-03-15 10:33:08,982 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:33:10] 2026-03-15 10:33:08,982 | INFO     | traces error code: 0
[2026-03-15 06:33:10] 2026-03-15 10:33:08,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:33:10] 2026-03-15 10:33:09,314 | INFO     | PID=3800892 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 06:33:10] 2026-03-15 10:33:09,314 | INFO     | .. there are 37 such processes running
[2026-03-15 06:33:10] 2026-03-15 10:33:09,315 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:33:10] 2026-03-15 10:33:09,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:33:10] 2026-03-15 10:33:09,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:33:10] 2026-03-15 10:33:09,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:33:10] 2026-03-15 10:33:09,316 | INFO     | [monitor] control thread has ended
[2026-03-15 06:33:10] 2026-03-15 10:33:09,718 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:33:10] 2026-03-15 10:33:09,725 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:33:10] 2026-03-15 10:33:09,727 [wrapper] pilotpid: 3800892
[2026-03-15 06:33:10] 2026-03-15 10:33:09,729 [wrapper] Pilot exit status: 0
[2026-03-15 06:33:10] 2026-03-15 10:33:09,780 [wrapper] pandaids: 7055004675 7055004675
[2026-03-15 06:33:10] 2026-03-15 10:33:09,934 [wrapper] cleanup supervisor_pilot  279370 3800893
[2026-03-15 06:33:10] 2026-03-15 10:33:09,937 [wrapper] Test setup, not cleaning
[2026-03-15 06:33:10] 2026-03-15 10:33:09,949 [wrapper] apfmon messages muted
[2026-03-15 06:33:10] 2026-03-15 10:33:09,952 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:33:10] 2026-03-15 10:33:09,955 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:33:10]  *** Error codes and diagnostics ***
[2026-03-15 06:33:10]     "exeErrorCode": 0,
[2026-03-15 06:33:10]     "exeErrorDiag": "",
[2026-03-15 06:33:10]     "pilotErrorCode": 0,
[2026-03-15 06:33:10]     "pilotErrorDiag": "",
[2026-03-15 06:33:10]  *** Listing of results directory ***
[2026-03-15 06:33:10] total 998016
[2026-03-15 06:33:10] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas      5111 Mar 14 12:40 queuedata.json
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas    585013 Mar 14 12:40 pilot3.tar.gz
[2026-03-15 06:33:10] -rwx------. 1 boincer umatlas     36322 Mar 14 12:40 runpilot2-wrapper.sh
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas       100 Mar 14 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:33:10] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 18:22 run_atlas
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas       105 Mar 14 18:22 job.xml
[2026-03-15 06:33:10] -rw-r--r--. 3 boincer umatlas 361936238 Mar 14 18:22 EVNT.48998030._000068.pool.root.1
[2026-03-15 06:33:10] -rw-r--r--. 3 boincer umatlas 361936238 Mar 14 18:22 ATLAS.root_0
[2026-03-15 06:33:10] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 18:22 start_atlas.sh
[2026-03-15 06:33:10] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 18:22 shared
[2026-03-15 06:33:10] -rw-r--r--. 2 boincer umatlas    597525 Mar 14 18:22 input.tar.gz
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas         0 Mar 14 18:22 boinc_lockfile
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas      2559 Mar 15 01:20 pandaJob.out
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas        57 Mar 15 01:20 setup.sh.local
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas   1006481 Mar 15 01:20 agis_schedconf.cvmfs.json
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas       441 Mar 15 01:20 workernode_map.json
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas 288523894 Mar 15 06:29 HITS.48998032._003127.pool.root.1
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas       532 Mar 15 06:30 boinc_task_state.xml
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas      6844 Mar 15 06:31 init_data.xml
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas      1052 Mar 15 06:32 memory_monitor_summary.json
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas   1511579 Mar 15 06:32 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas    551981 Mar 15 06:32 log.48998032._003127.job.log.tgz.1
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas      6407 Mar 15 06:32 heartbeat.json
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 06:32 boinc_mmap_file
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas        29 Mar 15 06:32 wrapper_checkpoint.txt
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas       823 Mar 15 06:33 pilotlog.txt
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas        95 Mar 15 06:33 pilot_heartbeat.json
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas   2262848 Mar 15 06:33 log.48998032._003127.job.log.1
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas       357 Mar 15 06:33 output.list
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas       620 Mar 15 06:33 runtime_log
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas   2836480 Mar 15 06:33 result.tar.gz
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas      9429 Mar 15 06:33 runtime_log.err
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas       785 Mar 15 06:33 rErKDmxDhL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2VtLDmO9tLMn.diag
[2026-03-15 06:33:10] -rw-r--r--. 1 boincer umatlas     23420 Mar 15 06:33 stderr.txt
[2026-03-15 06:33:10] HITS file was successfully produced:
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas 288523894 Mar 15 06:29 shared/HITS.pool.root.1
[2026-03-15 06:33:10]  *** Contents of shared directory: ***
[2026-03-15 06:33:10] total 638596
[2026-03-15 06:33:10] -rw-r--r--. 3 boincer umatlas 361936238 Mar 14 18:22 ATLAS.root_0
[2026-03-15 06:33:10] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 18:22 start_atlas.sh
[2026-03-15 06:33:10] -rw-r--r--. 2 boincer umatlas    597525 Mar 14 18:22 input.tar.gz
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas 288523894 Mar 15 06:29 HITS.pool.root.1
[2026-03-15 06:33:10] -rw-------. 1 boincer umatlas   2836480 Mar 15 06:33 result.tar.gz
06:33:11 (3793396): run_atlas exited; CPU time 59441.817102
06:33:11 (3793396): called boinc_finish(0)

</stderr_txt>
]]>

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