Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:17:51 (386719): wrapper (7.7.26015): starting
06:17:51 (386719): wrapper: running run_atlas (--nthreads 3)
[2026-03-15 06:17:51] Arguments: --nthreads 3
[2026-03-15 06:17:51] Threads: 3
[2026-03-15 06:17:51] Checking for CVMFS
[2026-03-15 06:17:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 06:17:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 06:17:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 06:17:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 06:17:53] 2.9.2.0 2962 2567 63324 157303 2 49 22677336 36864000 0 130560 0 1078566 99.984 100609 14804 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 06:17:53] CVMFS is ok
[2026-03-15 06:17:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 06:17:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 06:17:53] Further information can be found at the LHC@home message board.
[2026-03-15 06:17:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 06:17:53] Checking for apptainer binary...
[2026-03-15 06:17:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 06:17:53] Running /usr/bin/apptainer --version
[2026-03-15 06:17:53] apptainer version 1.4.1-1.1
[2026-03-15 06:17:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 06:17:53] cosA121
[2026-03-15 06:17:53] apptainer works
[2026-03-15 06:17:53] Set ATHENA_PROC_NUMBER=3
[2026-03-15 06:17:53] Set ATHENA_CORE_NUMBER=3
[2026-03-15 06:17:53] Starting ATLAS job with PandaID=7046928222
[2026-03-15 06:17:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 07:41:19]  *** The last 200 lines of the pilot log: ***
[2026-03-15 07:41:19] 2026-03-15 06:40:42,719 | INFO     | [job] retrieve thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:42,719 | INFO     | [job] queue monitor thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:42,720 | INFO     | [job] job monitor thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,026 | INFO     | [payload] failed_post thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,132 | INFO     | [payload] control thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,334 | INFO     | all job control threads have been joined
[2026-03-15 07:41:19] 2026-03-15 06:40:43,419 | INFO     | [data] control thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,621 | INFO     | [job] validate thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,686 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,889 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:43,892 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:44,027 | INFO     | [data] copytool_in thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:44,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 07:41:19] 2026-03-15 06:40:44,118 | INFO     | [payload] validate_post thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:44,340 | INFO     | [job] control thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:44,520 | INFO     | [data] copytool_out thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:48,074 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:40:52,635 | INFO     | job.realtimelogging is not enabled
[2026-03-15 07:41:19] 2026-03-15 06:40:53,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 07:41:19] 2026-03-15 06:41:14,664 | INFO     | [monitor] cgroup control has ended
[2026-03-15 07:41:19] 2026-03-15 06:41:14,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107532629824)>', '<ExcThread(monitor, started 140107017328384)>']
[2026-03-15 07:41:19] 2026-03-15 06:41:14,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 07:41:19] 2026-03-15 06:41:14,891 | INFO     | [monitor] control thread has ended
[2026-03-15 07:41:19] 2026-03-15 06:41:19,806 | INFO     | all workflow threads have been joined
[2026-03-15 07:41:19] 2026-03-15 06:41:19,807 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 07:41:19] 2026-03-15 06:41:19,807 | INFO     | traces error code: 0
[2026-03-15 07:41:19] 2026-03-15 06:41:19,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 07:41:19] 2026-03-15 06:41:19,854 [wrapper] ==== pilot stdout END ====
[2026-03-15 07:41:19] 2026-03-15 06:41:19,857 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 07:41:19] 2026-03-15 06:41:19,861 [wrapper] pilotpid: 390771
[2026-03-15 07:41:19] 2026-03-15 06:41:19,864 [wrapper] Pilot exit status: 0
[2026-03-15 07:41:19] 2026-03-15 06:41:19,872 [wrapper] pandaids: 7046928222
[2026-03-15 07:41:19] 2026-03-15 06:41:19,887 [wrapper] cleanup supervisor_pilot  400441 390772
[2026-03-15 07:41:19] 2026-03-15 06:41:19,890 [wrapper] Test setup, not cleaning
[2026-03-15 07:41:19] 2026-03-15 06:41:19,892 [wrapper] apfmon messages muted
[2026-03-15 07:41:19] 2026-03-15 06:41:19,895 [wrapper] ==== wrapper stdout END ====
[2026-03-15 07:41:19] 2026-03-15 06:41:19,897 [wrapper] ==== wrapper stderr END ====
[2026-03-15 07:41:19]  *** Error codes and diagnostics ***
[2026-03-15 07:41:19]     "exeErrorCode": 0,
[2026-03-15 07:41:19]     "exeErrorDiag": "",
[2026-03-15 07:41:19]     "pilotErrorCode": 0,
[2026-03-15 07:41:19]     "pilotErrorDiag": "",
[2026-03-15 07:41:19]  *** Listing of results directory ***
[2026-03-15 07:41:19] total 611844
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc    585013 Mar 14 16:02 pilot3.tar.gz
[2026-03-15 07:41:19] -rwx------ 1 boinc boinc     36322 Mar 14 16:05 runpilot2-wrapper.sh
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc      5111 Mar 14 16:10 queuedata.json
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc       100 Mar 15 06:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 07:41:19] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 06:17 run_atlas
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc       105 Mar 15 06:17 job.xml
[2026-03-15 07:41:19] -rw-r--r-- 2 boinc boinc 441973139 Mar 15 06:17 EVNT.46701403._001953.pool.root.1
[2026-03-15 07:41:19] drwxrwx--x 2 boinc boinc      4096 Mar 15 06:17 shared
[2026-03-15 07:41:19] -rw-r--r-- 2 boinc boinc    597535 Mar 15 06:17 input.tar.gz
[2026-03-15 07:41:19] -rw-r--r-- 2 boinc boinc     15845 Mar 15 06:17 start_atlas.sh
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc         0 Mar 15 06:17 boinc_setup_complete
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc      6197 Mar 15 06:17 init_data.xml
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc         0 Mar 15 06:17 boinc_lockfile
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc      2563 Mar 15 06:17 pandaJob.out
[2026-03-15 07:41:19] -rw------- 1 boinc boinc   1006481 Mar 15 06:18 agis_schedconf.cvmfs.json
[2026-03-15 07:41:19] -rw------- 1 boinc boinc   1511579 Mar 15 06:18 agis_ddmendpoints.agis.ALL.json
[2026-03-15 07:41:19] -rw------- 1 boinc boinc       419 Mar 15 06:18 workernode_map.json
[2026-03-15 07:41:19] drwx------ 5 boinc boinc      4096 Mar 15 06:18 pilot3
[2026-03-15 07:41:19] -rw------- 1 boinc boinc 178686785 Mar 15 07:40 HITS.48955010._046486.pool.root.1
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc       530 Mar 15 07:40 boinc_task_state.xml
[2026-03-15 07:41:19] -rw------- 1 boinc boinc        95 Mar 15 07:40 pilot_heartbeat.json
[2026-03-15 07:41:19] -rw------- 1 boinc boinc      1016 Mar 15 07:40 memory_monitor_summary.json
[2026-03-15 07:41:19] -rw------- 1 boinc boinc    249439 Mar 15 07:40 log.48955010._046486.job.log.tgz.1
[2026-03-15 07:41:19] -rw------- 1 boinc boinc      6302 Mar 15 07:40 heartbeat.json
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc      8192 Mar 15 07:41 boinc_mmap_file
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc        27 Mar 15 07:41 wrapper_checkpoint.txt
[2026-03-15 07:41:19] -rw------- 1 boinc boinc      4624 Mar 15 07:41 pilotlog.txt
[2026-03-15 07:41:19] -rw------- 1 boinc boinc    724805 Mar 15 07:41 log.48955010._046486.job.log.1
[2026-03-15 07:41:19] -rw------- 1 boinc boinc       357 Mar 15 07:41 output.list
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc       620 Mar 15 07:41 runtime_log
[2026-03-15 07:41:19] -rw------- 1 boinc boinc    993280 Mar 15 07:41 result.tar.gz
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc      8901 Mar 15 07:41 runtime_log.err
[2026-03-15 07:41:19] -rw------- 1 boinc boinc       658 Mar 15 07:41 bmMNDm3jfL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcpqLDmvgMN2m.diag
[2026-03-15 07:41:19] -rw-r--r-- 1 boinc boinc      6066 Mar 15 07:41 stderr.txt
[2026-03-15 07:41:19] HITS file was successfully produced:
[2026-03-15 07:41:19] -rw------- 1 boinc boinc 178686785 Mar 15 07:40 shared/HITS.pool.root.1
[2026-03-15 07:41:19]  *** Contents of shared directory: ***
[2026-03-15 07:41:19] total 607696
[2026-03-15 07:41:19] -rw-r--r-- 2 boinc boinc 441973139 Mar 15 06:17 ATLAS.root_0
[2026-03-15 07:41:19] -rw-r--r-- 2 boinc boinc    597535 Mar 15 06:17 input.tar.gz
[2026-03-15 07:41:19] -rw-r--r-- 2 boinc boinc     15845 Mar 15 06:17 start_atlas.sh
[2026-03-15 07:41:19] -rw------- 1 boinc boinc 178686785 Mar 15 07:40 HITS.pool.root.1
[2026-03-15 07:41:19] -rw------- 1 boinc boinc    993280 Mar 15 07:41 result.tar.gz
07:41:21 (386719): run_atlas exited; CPU time 13859.884497
07:41:21 (386719): called boinc_finish(0)

</stderr_txt>
]]>

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