Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:20:59 (13723): wrapper (7.7.26015): starting
15:20:59 (13723): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 15:20:59] Arguments: --nthreads 8
[2026-03-14 15:20:59] Threads: 8
[2026-03-14 15:20:59] Checking for CVMFS
[2026-03-14 15:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 15:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 15:20:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 15:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 15:20:59] 2.11.2.0 2925 73648 118644 157288 1 49 19443710 20275201 1 130560 0 14263844 99.979 1650159 4437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://10.10.128.19:3128 1
[2026-03-14 15:20:59] CVMFS is ok
[2026-03-14 15:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 15:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 15:20:59] Further information can be found at the LHC@home message board.
[2026-03-14 15:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 15:20:59] Checking for apptainer binary...
[2026-03-14 15:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 15:20:59] Running /usr/bin/apptainer --version
[2026-03-14 15:20:59] apptainer version 1.3.2-1.el7
[2026-03-14 15:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 15:21:01] c-115-8.aglt2.org
[2026-03-14 15:21:01] apptainer works
[2026-03-14 15:21:01] Set ATHENA_PROC_NUMBER=8
[2026-03-14 15:21:01] Set ATHENA_CORE_NUMBER=8
[2026-03-14 15:21:01] Starting ATLAS job with PandaID=7046917737
[2026-03-14 15:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 17:10:40]  *** The last 200 lines of the pilot log: ***
[2026-03-14 17:10:40] 2026-03-14 21:09:59,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,619 | INFO     | log transfer has been attempted: DONE
[2026-03-14 17:10:40] 2026-03-14 21:09:59,619 | INFO     | job 7046917737 has finished - writing final server update
[2026-03-14 17:10:40] 2026-03-14 21:09:59,619 | INFO     | total number of processed events: 400 (read)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,621 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046917737/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,622 | INFO     | extracted standard info from prmon json
[2026-03-14 17:10:40] 2026-03-14 21:09:59,622 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 17:10:40] 2026-03-14 21:09:59,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 17:10:40] 2026-03-14 21:09:59,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 17:10:40] 2026-03-14 21:09:59,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 17:10:40] 2026-03-14 21:09:59,625 | INFO     | fitting pss+swap vs Time
[2026-03-14 17:10:40] 2026-03-14 21:09:59,625 | INFO     | sum of square deviations: 379832238.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,626 | INFO     | sum of deviations: -10372196732.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,626 | INFO     | mean x: 1773519342.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,626 | INFO     | mean y: 2569433.074766355
[2026-03-14 17:10:40] 2026-03-14 21:09:59,626 | INFO     | intersect: 48432612180.607925
[2026-03-14 17:10:40] 2026-03-14 21:09:59,626 | INFO     | chi2: 2.3700928012435307
[2026-03-14 17:10:40] 2026-03-14 21:09:59,627 | INFO     | sum of square deviations: 329031285.5
[2026-03-14 17:10:40] 2026-03-14 21:09:59,627 | INFO     | sum of deviations: -1988124382.9999995
[2026-03-14 17:10:40] 2026-03-14 21:09:59,627 | INFO     | mean x: 1773519189.5
[2026-03-14 17:10:40] 2026-03-14 21:09:59,628 | INFO     | mean y: 2593803.6470588236
[2026-03-14 17:10:40] 2026-03-14 21:09:59,628 | INFO     | intersect: 10718829309.961388
[2026-03-14 17:10:40] 2026-03-14 21:09:59,628 | INFO     | chi2: 1.6092649033205446
[2026-03-14 17:10:40] 2026-03-14 21:09:59,628 | INFO     | current chi2=1.6092649033205446 (change=32.10118597566298 %)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,628 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,629 | INFO     | sum of deviations: -802480375.9999981
[2026-03-14 17:10:40] 2026-03-14 21:09:59,629 | INFO     | mean x: 1773519037.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,629 | INFO     | mean y: 2597732.7319587627
[2026-03-14 17:10:40] 2026-03-14 21:09:59,629 | INFO     | intersect: 5032074524.709401
[2026-03-14 17:10:40] 2026-03-14 21:09:59,630 | INFO     | chi2: 1.6124571697910508
[2026-03-14 17:10:40] 2026-03-14 21:09:59,630 | INFO     | current chi2=1.6124571697910508 (change=-0.1983679917407812 %)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,630 | INFO     | right removable region: 96
[2026-03-14 17:10:40] 2026-03-14 21:09:59,630 | INFO     | sum of square deviations: 329031285.5
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | sum of deviations: -26441634436.999996
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | mean x: 1773519494.5
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | mean y: 2616646.9411764704
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | intersect: 142526310310.9044
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | chi2: 0.9087659256005344
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | current chi2=0.9087659256005344 (change=61.656947562402344 %)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,631 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,632 | INFO     | sum of deviations: -25897562932.000008
[2026-03-14 17:10:40] 2026-03-14 21:09:59,632 | INFO     | mean x: 1773519647.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,632 | INFO     | mean y: 2614693.0206185565
[2026-03-14 17:10:40] 2026-03-14 21:09:59,632 | INFO     | intersect: 162313420577.4869
[2026-03-14 17:10:40] 2026-03-14 21:09:59,632 | INFO     | chi2: 0.8810603087064808
[2026-03-14 17:10:40] 2026-03-14 21:09:59,633 | INFO     | current chi2=0.8810603087064808 (change=3.0487077159880376 %)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,633 | INFO     | left removable region: 20
[2026-03-14 17:10:40] 2026-03-14 21:09:59,633 | INFO     | sum of square deviations: 136095575.0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,633 | INFO     | sum of deviations: -12183552569.999998
[2026-03-14 17:10:40] 2026-03-14 21:09:59,633 | INFO     | mean x: 1773519616.5
[2026-03-14 17:10:40] 2026-03-14 21:09:59,633 | INFO     | mean y: 2636422.8421052634
[2026-03-14 17:10:40] 2026-03-14 21:09:59,634 | INFO     | intersect: 158771718235.78116
[2026-03-14 17:10:40] 2026-03-14 21:09:59,634 | INFO     | chi2: 0.06453803823266105
[2026-03-14 17:10:40] 2026-03-14 21:09:59,634 | INFO     | current memory leak: -89.52 B/s (using 76 data points, chi2=0.06)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,634 | INFO     | could have reported an average CPU frequency of 1729 MHz (7 samples)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,634 | INFO     | ..............................
[2026-03-14 17:10:40] 2026-03-14 21:09:59,634 | INFO     | . Timing measurements:
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . get job = 0 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . initial setup = 8 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . payload setup = 8 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . stage-in = 0 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . payload execution = 6490 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . stage-out = 0 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | . log creation = 0 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,635 | INFO     | ..............................
[2026-03-14 17:10:40] 2026-03-14 21:09:59,655 | INFO     | time since job start (6515s) is within the limit (345600.0s)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,806 | INFO     | 
[2026-03-14 17:10:40] 2026-03-14 21:09:59,833 | INFO     | job summary report
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | --------------------------------------------------
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | PanDA job id: 7046917737
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | task id: 48955010
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | errors: (none)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | pilot state: finished 
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | transexitcode: 0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | exeerrorcode: 0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | exeerrordiag: 
[2026-03-14 17:10:40] 2026-03-14 21:09:59,834 | INFO     | exitcode: 0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | exitmsg: OK
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | cpuconsumptiontime: 46276 s
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | nevents: 400
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | neventsw: 0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | pid: 21836
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | pgrp: 21836
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | corecount: 8
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | event service: False
[2026-03-14 17:10:40] 2026-03-14 21:09:59,835 | INFO     | sizes: {0: 2279749, 1: 2280210, 11: 2280210, 6502: 2307253, 6503: 2316251, 6504: 2316307, 6505: 2316629}
[2026-03-14 17:10:40] 2026-03-14 21:09:59,836 | INFO     | --------------------------------------------------
[2026-03-14 17:10:40] 2026-03-14 21:09:59,836 | INFO     | 
[2026-03-14 17:10:40] 2026-03-14 21:09:59,836 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 17:10:40] 2026-03-14 21:09:59,866 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,867 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,867 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,867 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,870 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 17:10:40] 2026-03-14 21:09:59,870 | INFO     | job 7046917737 has completed (purged errors)
[2026-03-14 17:10:40] 2026-03-14 21:09:59,871 | INFO     | overall cleanup function is called
[2026-03-14 17:10:40] 2026-03-14 21:10:00,878 | INFO     | --- collectZombieJob: --- 10, [21836]
[2026-03-14 17:10:40] 2026-03-14 21:10:00,879 | INFO     | zombie collector waiting for pid 21836
[2026-03-14 17:10:40] 2026-03-14 21:10:00,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 17:10:40] 2026-03-14 21:10:00,879 | INFO     | collected zombie processes
[2026-03-14 17:10:40] 2026-03-14 21:10:00,879 | INFO     | will attempt to kill all subprocesses of pid=21836
[2026-03-14 17:10:40] 2026-03-14 21:10:00,966 | INFO     | process IDs to be killed: [21836] (in reverse order)
[2026-03-14 17:10:40] 2026-03-14 21:10:01,027 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 17:10:40] 2026-03-14 21:10:01,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 17:10:40] 2026-03-14 21:10:01,032 | INFO     | did not find any defunct processes belonging to 21836
[2026-03-14 17:10:40] 2026-03-14 21:10:01,035 | INFO     | did not find any defunct processes belonging to 21836
[2026-03-14 17:10:40] 2026-03-14 21:10:01,035 | INFO     | ready for new job
[2026-03-14 17:10:40] 2026-03-14 21:10:01,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 17:10:40] 2026-03-14 21:10:01,036 | INFO     | **************************************
[2026-03-14 17:10:40] 2026-03-14 21:10:01,037 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 17:10:40] 2026-03-14 21:10:01,037 | INFO     | **************************************
[2026-03-14 17:10:40] 2026-03-14 21:10:01,037 | INFO     | 
[2026-03-14 17:10:40] 2026-03-14 21:10:01,037 | INFO     | architecture information:
[2026-03-14 17:10:40] 2026-03-14 21:10:01,038 | INFO     | executing command: cat /etc/os-release
[2026-03-14 17:10:40] 2026-03-14 21:10:01,056 | INFO     | cat /etc/os-release:
[2026-03-14 17:10:40] NAME="CentOS Linux"
[2026-03-14 17:10:40] VERSION="7 (Core)"
[2026-03-14 17:10:40] ID="centos"
[2026-03-14 17:10:40] ID_LIKE="rhel fedora"
[2026-03-14 17:10:40] VERSION_ID="7"
[2026-03-14 17:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 17:10:40] ANSI_COLOR="0;31"
[2026-03-14 17:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 17:10:40] HOME_URL="https://www.centos.org/"
[2026-03-14 17:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 17:10:40] 
[2026-03-14 17:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 17:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 17:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 17:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 17:10:40] 
[2026-03-14 17:10:40] 2026-03-14 21:10:01,057 | INFO     | **************************************
[2026-03-14 17:10:40] 2026-03-14 21:10:01,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 17:10:40] 2026-03-14 21:10:01,582 | INFO     | sufficient remaining disk space (18138267648 B)
[2026-03-14 17:10:40] 2026-03-14 21:10:01,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 17:10:40] 2026-03-14 21:10:01,583 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 17:10:40] 2026-03-14 21:10:01,583 | INFO     | update_server=False
[2026-03-14 17:10:40] 2026-03-14 21:10:01,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 17:10:40] 2026-03-14 21:10:01,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 17:10:40] 2026-03-14 21:10:01,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:10:40] 2026-03-14 21:10:01,584 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-14 17:10:40] 2026-03-14 21:10:01,585 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 17:10:40] 2026-03-14 21:10:01,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 17:10:40] 2026-03-14 21:10:01,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 17:10:40] 2026-03-14 21:10:01,968 | INFO     | all data control threads have been joined
[2026-03-14 17:10:40] 2026-03-14 21:10:02,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:10:40] 2026-03-14 21:10:02,555 | INFO     | aborting loop
[2026-03-14 17:10:40] 2026-03-14 21:10:02,589 | INFO     | [job] retrieve thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:02,589 | INFO     | [job] queue monitor thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:02,642 | INFO     | [data] copytool_in thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:02,682 | INFO     | all job control threads have been joined
[2026-03-14 17:10:40] 2026-03-14 21:10:02,726 | INFO     | all payload control threads have been joined
[2026-03-14 17:10:40] 2026-03-14 21:10:02,742 | INFO     | [payload] validate_post thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:02,974 | INFO     | [data] control thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,081 | INFO     | [payload] failed_post thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,144 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,536 | INFO     | [job] validate thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,561 | INFO     | [job] job monitor thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,589 | INFO     | [data] copytool_out thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,688 | INFO     | [job] control thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,734 | INFO     | [payload] control thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,874 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,944 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:03,959 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:04,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 17:10:40] 2026-03-14 21:10:08,520 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 17:10:40] 2026-03-14 21:10:33,783 | INFO     | [monitor] cgroup control has ended
[2026-03-14 17:10:40] 2026-03-14 21:10:34,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917276604224)>', '<ExcThread(monitor, started 139916377831168)>']
[2026-03-14 17:10:40] 2026-03-14 21:10:35,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 17:10:40] 2026-03-14 21:10:35,744 | INFO     | [monitor] control thread has ended
[2026-03-14 17:10:40] 2026-03-14 21:10:39,791 | INFO     | all workflow threads have been joined
[2026-03-14 17:10:40] 2026-03-14 21:10:39,791 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 17:10:40] 2026-03-14 21:10:39,792 | INFO     | traces error code: 0
[2026-03-14 17:10:40] 2026-03-14 21:10:39,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 17:10:40] 2026-03-14 21:10:39,908 [wrapper] ==== pilot stdout END ====
[2026-03-14 17:10:40] 2026-03-14 21:10:39,913 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 17:10:40] 2026-03-14 21:10:39,918 [wrapper] pilotpid: 17452
[2026-03-14 17:10:40] 2026-03-14 21:10:39,922 [wrapper] Pilot exit status: 0
[2026-03-14 17:10:40] 2026-03-14 21:10:39,942 [wrapper] pandaids: 7046917737
[2026-03-14 17:10:40] 2026-03-14 21:10:39,987 [wrapper] cleanup supervisor_pilot  1038 17453
[2026-03-14 17:10:40] 2026-03-14 21:10:39,992 [wrapper] Test setup, not cleaning
[2026-03-14 17:10:40] 2026-03-14 21:10:39,997 [wrapper] apfmon messages muted
[2026-03-14 17:10:40] 2026-03-14 21:10:40,002 [wrapper] ==== wrapper stdout END ====
[2026-03-14 17:10:40] 2026-03-14 21:10:40,008 [wrapper] ==== wrapper stderr END ====
[2026-03-14 17:10:40]  *** Error codes and diagnostics ***
[2026-03-14 17:10:40]     "exeErrorCode": 0,
[2026-03-14 17:10:40]     "exeErrorDiag": "",
[2026-03-14 17:10:40]     "pilotErrorCode": 0,
[2026-03-14 17:10:40]     "pilotErrorDiag": "",
[2026-03-14 17:10:40]  *** Listing of results directory ***
[2026-03-14 17:10:40] total 609756
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 11:02 pilot3.tar.gz
[2026-03-14 17:10:40] -rwx------ 1 boincer umatlas     36322 Mar 14 11:05 runpilot2-wrapper.sh
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 11:08 queuedata.json
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas       100 Mar 14 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 17:10:40] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 15:20 run_atlas
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas       105 Mar 14 15:20 job.xml
[2026-03-14 17:10:40] -rw-r--r-- 2 boincer umatlas 435547067 Mar 14 15:20 EVNT.46701403._001917.pool.root.1
[2026-03-14 17:10:40] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 15:20 start_atlas.sh
[2026-03-14 17:10:40] drwxrwx--x 2 boincer umatlas      4096 Mar 14 15:20 shared
[2026-03-14 17:10:40] -rw-r--r-- 2 boincer umatlas    597533 Mar 14 15:20 input.tar.gz
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas         0 Mar 14 15:20 boinc_lockfile
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas      2565 Mar 14 15:21 pandaJob.out
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas        57 Mar 14 15:21 setup.sh.local
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas   1005897 Mar 14 15:21 agis_schedconf.cvmfs.json
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas   1511579 Mar 14 15:21 agis_ddmendpoints.agis.ALL.json
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas       432 Mar 14 15:21 workernode_map.json
[2026-03-14 17:10:40] drwx------ 5 boincer umatlas      4096 Mar 14 15:21 pilot3
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas      5908 Mar 14 17:04 init_data.xml
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas 182280779 Mar 14 17:09 HITS.48955010._044813.pool.root.1
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas        95 Mar 14 17:09 pilot_heartbeat.json
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas       530 Mar 14 17:09 boinc_task_state.xml
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas      1049 Mar 14 17:09 memory_monitor_summary.json
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas    383460 Mar 14 17:09 log.48955010._044813.job.log.tgz.1
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas      6408 Mar 14 17:09 heartbeat.json
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas        27 Mar 14 17:10 wrapper_checkpoint.txt
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 17:10 boinc_mmap_file
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas      4548 Mar 14 17:10 pilotlog.txt
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas    927854 Mar 14 17:10 log.48955010._044813.job.log.1
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas       357 Mar 14 17:10 output.list
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas       620 Mar 14 17:10 runtime_log
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas   1331200 Mar 14 17:10 result.tar.gz
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas      9336 Mar 14 17:10 runtime_log.err
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas       657 Mar 14 17:10 qrMNDmUjfL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTjqLDmmHZtQn.diag
[2026-03-14 17:10:40] -rw-r--r-- 1 boincer umatlas     20977 Mar 14 17:10 stderr.txt
[2026-03-14 17:10:40] HITS file was successfully produced:
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas 182280779 Mar 14 17:09 shared/HITS.pool.root.1
[2026-03-14 17:10:40]  *** Contents of shared directory: ***
[2026-03-14 17:10:40] total 605256
[2026-03-14 17:10:40] -rw-r--r-- 2 boincer umatlas 435547067 Mar 14 15:20 ATLAS.root_0
[2026-03-14 17:10:40] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 15:20 start_atlas.sh
[2026-03-14 17:10:40] -rw-r--r-- 2 boincer umatlas    597533 Mar 14 15:20 input.tar.gz
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas 182280779 Mar 14 17:09 HITS.pool.root.1
[2026-03-14 17:10:40] -rw------- 1 boincer umatlas   1331200 Mar 14 17:10 result.tar.gz
17:10:42 (13723): run_atlas exited; CPU time 46268.084375
17:10:42 (13723): called boinc_finish(0)

</stderr_txt>
]]>

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