Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:58 (2298829): wrapper (7.7.26015): starting
08:21:58 (2298829): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 08:21:58] Arguments: --nthreads 4
[2026-03-15 08:21:58] Threads: 4
[2026-03-15 08:21:58] Checking for CVMFS
[2026-03-15 08:21:58] No cvmfs_config command found, will try listing directly
[2026-03-15 08:21:58] CVMFS is ok
[2026-03-15 08:21:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 08:21:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 08:21:58] Further information can be found at the LHC@home message board.
[2026-03-15 08:21:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 08:21:58] Checking for apptainer binary...
[2026-03-15 08:21:58] which: no apptainer in ((null))
[2026-03-15 08:21:58] apptainer is not installed, using version from CVMFS
[2026-03-15 08:21:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 08:21:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-15 08:21:58] apptainer works
[2026-03-15 08:21:58] Set ATHENA_PROC_NUMBER=4
[2026-03-15 08:21:58] Set ATHENA_CORE_NUMBER=4
[2026-03-15 08:21:58] Starting ATLAS job with PandaID=7046927094
[2026-03-15 08:21:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 09:37:25]  *** The last 200 lines of the pilot log: ***
[2026-03-15 09:37:25]  is_tar=False
[2026-03-15 09:37:25]  lfn=log.48955010._046328.job.log.tgz.1
[2026-03-15 09:37:25]  mtime=0
[2026-03-15 09:37:25]  protocol_id=None
[2026-03-15 09:37:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 09:37:25]  replicas=None
[2026-03-15 09:37:25]  scope=mc23_13p6TeV
[2026-03-15 09:37:25]  status=None
[2026-03-15 09:37:25]  status_code=0
[2026-03-15 09:37:25]  storage_token=
[2026-03-15 09:37:25]  surl=/var/lib/boinc/var/slot76/slots/10/PanDA_Pilot-7046927094/log.48955010._046328.job.log.tgz.1
[2026-03-15 09:37:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/7b/log.48955010._046328.job.log.tgz.1
[2026-03-15 09:37:25]  workdir=None
[2026-03-15 09:37:25] ]
[2026-03-15 09:37:25] 2026-03-15 08:36:11,894 | INFO     | transferring file log.48955010._046328.job.log.tgz.1 from /var/lib/boinc/var/slot76/slots/10/PanDA_Pilot-7046927094/log.48955010._046328.job.log.tgz.1 to /var/lib/
[2026-03-15 09:37:25] 2026-03-15 08:36:11,894 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot76/slots/10/PanDA_Pilot-7046927094/log.48955010._046328.job.log.tgz.1 /var/lib/boinc/var/slot76/slots/10/
[2026-03-15 09:37:25] 2026-03-15 08:36:11,910 | INFO     | adding to output.list: log.48955010._046328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/7b/log.48955010._046328.job.log.tg
[2026-03-15 09:37:25] 2026-03-15 08:36:11,911 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 09:37:25] 2026-03-15 08:36:11,911 | INFO     | summary of transferred files:
[2026-03-15 09:37:25] 2026-03-15 08:36:11,911 | INFO     |  -- lfn=log.48955010._046328.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 09:37:25] 2026-03-15 08:36:11,911 | INFO     | stage-out finished correctly
[2026-03-15 09:37:25] 2026-03-15 08:36:12,667 | INFO     | time since job start (4441s) is within the limit (345600.0s)
[2026-03-15 09:37:25] 2026-03-15 08:36:13,431 | INFO     | monitor loop #322: job 0:7046927094 is in state 'finished'
[2026-03-15 09:37:25] 2026-03-15 08:36:13,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 09:37:25] 2026-03-15 08:36:14,673 | INFO     | time since job start (4443s) is within the limit (345600.0s)
[2026-03-15 09:37:25] 2026-03-15 08:36:15,070 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 09:37:25] 2026-03-15 08:36:15,934 | INFO     | monitor loop #323: job 0:7046927094 is in state 'finished'
[2026-03-15 09:37:25] 2026-03-15 08:36:15,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 09:37:25] 2026-03-15 08:36:16,678 | INFO     | time since job start (4445s) is within the limit (345600.0s)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,480 | INFO     | job 7046927094 has state=finished
[2026-03-15 09:37:25] 2026-03-15 08:36:17,480 | INFO     | preparing for final server update for job 7046927094 in state='finished'
[2026-03-15 09:37:25] 2026-03-15 08:36:17,480 | INFO     | reading metadata from: /var/lib/boinc/var/slot76/slots/10/PanDA_Pilot-7046927094/jobReport.json
[2026-03-15 09:37:25] 2026-03-15 08:36:17,481 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot76/slots/10/workernode_map.json
[2026-03-15 09:37:25] 2026-03-15 08:36:17,482 | INFO     | this job has now completed (state=finished)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,482 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,482 | INFO     | log transfer has been attempted: DONE
[2026-03-15 09:37:25] 2026-03-15 08:36:17,482 | INFO     | job 7046927094 has finished - writing final server update
[2026-03-15 09:37:25] 2026-03-15 08:36:17,482 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1758536/.job.ad'
[2026-03-15 09:37:25] 2026-03-15 08:36:17,482 | INFO     | total number of processed events: 400 (read)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,499 | INFO     | using path: /var/lib/boinc/var/slot76/slots/10/PanDA_Pilot-7046927094/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,500 | INFO     | extracted standard info from prmon json
[2026-03-15 09:37:25] 2026-03-15 08:36:17,500 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 09:37:25] 2026-03-15 08:36:17,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 09:37:25] 2026-03-15 08:36:17,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 09:37:25] 2026-03-15 08:36:17,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 09:37:25] 2026-03-15 08:36:17,501 | INFO     | fitting pss+swap vs Time
[2026-03-15 09:37:25] 2026-03-15 08:36:17,501 | INFO     | sum of square deviations: 89127252.5
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | sum of deviations: -336099325.0
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | mean x: 1773561638.5
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | mean y: 2333512.878787879
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | intersect: 6690443522.168529
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | chi2: 0.0002646256127448754
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | current memory leak: -3.77 B/s (using 66 data points, chi2=0.00)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | could have reported an average CPU frequency of 3590 MHz (6 samples)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | ..............................
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . Timing measurements:
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . get job = 0 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . initial setup = 5 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . payload setup = 5 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . stage-in = 0 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . payload execution = 4419 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . stage-out = 0 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | . log creation = 0 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,502 | INFO     | ..............................
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | 
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | job summary report
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | --------------------------------------------------
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | PanDA job id: 7046927094
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | task id: 48955010
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | errors: (none)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | pilot state: finished 
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | transexitcode: 0
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | exeerrorcode: 0
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | exeerrordiag: 
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | exitcode: 0
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | exitmsg: OK
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | cpuconsumptiontime: 17003 s
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | nevents: 400
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | neventsw: 0
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | pid: 2315496
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | pgrp: 2315496
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | corecount: 4
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | event service: False
[2026-03-15 09:37:25] 2026-03-15 08:36:17,542 | INFO     | sizes: {0: 2280189, 11: 2280189, 4428: 2306238, 4430: 2315260, 4433: 2315316, 4435: 2315510}
[2026-03-15 09:37:25] 2026-03-15 08:36:17,543 | INFO     | --------------------------------------------------
[2026-03-15 09:37:25] 2026-03-15 08:36:17,543 | INFO     | 
[2026-03-15 09:37:25] 2026-03-15 08:36:17,543 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/10
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | job 7046927094 has completed (purged errors)
[2026-03-15 09:37:25] 2026-03-15 08:36:17,556 | INFO     | overall cleanup function is called
[2026-03-15 09:37:25] 2026-03-15 08:36:18,562 | INFO     | --- collectZombieJob: --- 10, [2315496]
[2026-03-15 09:37:25] 2026-03-15 08:36:18,563 | INFO     | zombie collector waiting for pid 2315496
[2026-03-15 09:37:25] 2026-03-15 08:36:18,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 09:37:25] 2026-03-15 08:36:18,563 | INFO     | collected zombie processes
[2026-03-15 09:37:25] 2026-03-15 08:36:18,563 | INFO     | will attempt to kill all subprocesses of pid=2315496
[2026-03-15 09:37:25] 2026-03-15 08:36:19,041 | INFO     | process IDs to be killed: [2315496] (in reverse order)
[2026-03-15 09:37:25] 2026-03-15 08:36:19,268 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 09:37:25] 2026-03-15 08:36:19,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 09:37:25] 2026-03-15 08:36:19,298 | INFO     | did not find any defunct processes belonging to 2315496
[2026-03-15 09:37:25] 2026-03-15 08:36:19,327 | INFO     | did not find any defunct processes belonging to 2315496
[2026-03-15 09:37:25] 2026-03-15 08:36:19,327 | INFO     | ready for new job
[2026-03-15 09:37:25] 2026-03-15 08:36:19,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 09:37:25] 2026-03-15 08:36:19,328 | INFO     | **************************************
[2026-03-15 09:37:25] 2026-03-15 08:36:19,328 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 09:37:25] 2026-03-15 08:36:19,329 | INFO     | **************************************
[2026-03-15 09:37:25] 2026-03-15 08:36:19,329 | INFO     | 
[2026-03-15 09:37:25] 2026-03-15 08:36:19,334 | INFO     | architecture information:
[2026-03-15 09:37:25] 2026-03-15 08:36:19,334 | INFO     | executing command: cat /etc/os-release
[2026-03-15 09:37:25] 2026-03-15 08:36:19,349 | INFO     | cat /etc/os-release:
[2026-03-15 09:37:25] NAME="CentOS Linux"
[2026-03-15 09:37:25] VERSION="7 (Core)"
[2026-03-15 09:37:25] ID="centos"
[2026-03-15 09:37:25] ID_LIKE="rhel fedora"
[2026-03-15 09:37:25] VERSION_ID="7"
[2026-03-15 09:37:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 09:37:25] ANSI_COLOR="0;31"
[2026-03-15 09:37:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 09:37:25] HOME_URL="https://www.centos.org/"
[2026-03-15 09:37:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 09:37:25] 
[2026-03-15 09:37:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 09:37:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 09:37:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 09:37:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 09:37:25] 
[2026-03-15 09:37:25] 2026-03-15 08:36:19,349 | INFO     | **************************************
[2026-03-15 09:37:25] 2026-03-15 08:36:19,851 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/10
[2026-03-15 09:37:25] 2026-03-15 08:36:19,865 | INFO     | sufficient remaining disk space (77961625600 B)
[2026-03-15 09:37:25] 2026-03-15 08:36:19,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 09:37:25] 2026-03-15 08:36:19,866 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 09:37:25] 2026-03-15 08:36:19,866 | INFO     | update_server=False
[2026-03-15 09:37:25] 2026-03-15 08:36:19,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 09:37:25] 2026-03-15 08:36:19,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 09:37:25] 2026-03-15 08:36:19,866 | INFO     | aborting loop
[2026-03-15 09:37:25] 2026-03-15 08:36:19,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 09:37:25] 2026-03-15 08:36:20,032 | INFO     | all payload control threads have been joined
[2026-03-15 09:37:25] 2026-03-15 08:36:20,544 | INFO     | all data control threads have been joined
[2026-03-15 09:37:25] 2026-03-15 08:36:20,871 | INFO     | [job] retrieve thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:20,872 | INFO     | [job] job monitor thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,037 | INFO     | [payload] control thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 09:37:25] 2026-03-15 08:36:21,425 | INFO     | [payload] failed_post thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,480 | INFO     | all job control threads have been joined
[2026-03-15 09:37:25] 2026-03-15 08:36:21,549 | INFO     | [data] control thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,632 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,643 | INFO     | [job] validate thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,742 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,811 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:21,976 | INFO     | [data] copytool_out thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:22,143 | INFO     | [data] copytool_in thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:22,280 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:22,422 | INFO     | [payload] validate_post thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:22,488 | INFO     | [job] control thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:22,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 09:37:25] 2026-03-15 08:36:23,552 | INFO     | [job] queue monitor thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:25,126 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 09:37:25] 2026-03-15 08:36:50,330 | INFO     | PID=2308972 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 09:37:25] 2026-03-15 08:36:50,330 | INFO     | .. there are 45 such processes running
[2026-03-15 09:37:25] 2026-03-15 08:36:50,331 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 09:37:25] 2026-03-15 08:36:50,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 09:37:25] 2026-03-15 08:36:50,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 09:37:25] 2026-03-15 08:37:05,400 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-15 09:37:25] 2026-03-15 08:37:17,844 | INFO     | [monitor] cgroup control has ended
[2026-03-15 09:37:25] 2026-03-15 08:37:19,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23156597458752)>', '<ExcThread(monitor, started 23156359444224)>']
[2026-03-15 09:37:25] 2026-03-15 08:37:20,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 09:37:25] 2026-03-15 08:37:20,480 | INFO     | [monitor] control thread has ended
[2026-03-15 09:37:25] 2026-03-15 08:37:24,685 | INFO     | all workflow threads have been joined
[2026-03-15 09:37:25] 2026-03-15 08:37:24,686 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 09:37:25] 2026-03-15 08:37:24,686 | INFO     | traces error code: 0
[2026-03-15 09:37:25] 2026-03-15 08:37:24,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 09:37:25] 2026-03-15 08:37:24,811 [wrapper] ==== pilot stdout END ====
[2026-03-15 09:37:25] 2026-03-15 08:37:24,813 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 09:37:25] 2026-03-15 08:37:24,816 [wrapper] pilotpid: 2308972
[2026-03-15 09:37:25] 2026-03-15 08:37:24,818 [wrapper] Pilot exit status: 0
[2026-03-15 09:37:25] 2026-03-15 08:37:24,827 [wrapper] pandaids: 7046927094
[2026-03-15 09:37:25] 2026-03-15 08:37:24,958 [wrapper] cleanup supervisor_pilot 3035588 2308973
[2026-03-15 09:37:25] 2026-03-15 08:37:24,961 [wrapper] Test setup, not cleaning
[2026-03-15 09:37:25] 2026-03-15 08:37:24,964 [wrapper] apfmon messages muted
[2026-03-15 09:37:25] 2026-03-15 08:37:24,966 [wrapper] ==== wrapper stdout END ====
[2026-03-15 09:37:25] 2026-03-15 08:37:24,968 [wrapper] ==== wrapper stderr END ====
[2026-03-15 09:37:25]  *** Error codes and diagnostics ***
[2026-03-15 09:37:25]     "exeErrorCode": 0,
[2026-03-15 09:37:25]     "exeErrorDiag": "",
[2026-03-15 09:37:25]     "pilotErrorCode": 0,
[2026-03-15 09:37:25]     "pilotErrorDiag": "",
[2026-03-15 09:37:25]  *** Listing of results directory ***
[2026-03-15 09:37:25] total 611652
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc    585013 Mar 14 16:02 pilot3.tar.gz
[2026-03-15 09:37:25] -rwx------. 1 boinc boinc     36322 Mar 14 16:03 runpilot2-wrapper.sh
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc      5111 Mar 14 16:05 queuedata.json
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc       100 Mar 15 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 09:37:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 08:21 run_atlas
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc       105 Mar 15 08:21 job.xml
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc      6708 Mar 15 08:21 init_data.xml
[2026-03-15 09:37:25] -rw-r--r--. 2 boinc boinc 441952887 Mar 15 08:21 EVNT.46701403._001950.pool.root.1
[2026-03-15 09:37:25] -rw-r--r--. 2 boinc boinc     15845 Mar 15 08:21 start_atlas.sh
[2026-03-15 09:37:25] drwxrwx--x. 2 boinc boinc      4096 Mar 15 08:21 shared
[2026-03-15 09:37:25] -rw-r--r--. 2 boinc boinc    597527 Mar 15 08:21 input.tar.gz
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc         0 Mar 15 08:21 boinc_lockfile
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc      2562 Mar 15 08:21 pandaJob.out
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc   1006481 Mar 15 08:22 agis_schedconf.cvmfs.json
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc   1511579 Mar 15 08:22 agis_ddmendpoints.agis.ALL.json
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc       443 Mar 15 08:22 workernode_map.json
[2026-03-15 09:37:25] drwx------. 5 boinc boinc      4096 Mar 15 08:22 pilot3
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc 178638242 Mar 15 09:35 HITS.48955010._046328.pool.root.1
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc       530 Mar 15 09:35 boinc_task_state.xml
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc      1041 Mar 15 09:36 memory_monitor_summary.json
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc    249252 Mar 15 09:36 log.48955010._046328.job.log.tgz.1
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc      6350 Mar 15 09:36 heartbeat.json
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc        95 Mar 15 09:36 pilot_heartbeat.json
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc      8192 Mar 15 09:37 boinc_mmap_file
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc        27 Mar 15 09:37 wrapper_checkpoint.txt
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc      4830 Mar 15 09:37 pilotlog.txt
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc    655084 Mar 15 09:37 log.48955010._046328.job.log.1
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc       357 Mar 15 09:37 output.list
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc       620 Mar 15 09:37 runtime_log
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc    921600 Mar 15 09:37 result.tar.gz
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc      9221 Mar 15 09:37 runtime_log.err
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc       662 Mar 15 09:37 YuqNDmphfL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdhqLDmqsNQgn.diag
[2026-03-15 09:37:25] -rw-r--r--. 1 boinc boinc     21433 Mar 15 09:37 stderr.txt
[2026-03-15 09:37:25] HITS file was successfully produced:
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc 178638242 Mar 15 09:35 shared/HITS.pool.root.1
[2026-03-15 09:37:25]  *** Contents of shared directory: ***
[2026-03-15 09:37:25] total 607556
[2026-03-15 09:37:25] -rw-r--r--. 2 boinc boinc 441952887 Mar 15 08:21 ATLAS.root_0
[2026-03-15 09:37:25] -rw-r--r--. 2 boinc boinc     15845 Mar 15 08:21 start_atlas.sh
[2026-03-15 09:37:25] -rw-r--r--. 2 boinc boinc    597527 Mar 15 08:21 input.tar.gz
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc 178638242 Mar 15 09:35 HITS.pool.root.1
[2026-03-15 09:37:25] -rw-------. 1 boinc boinc    921600 Mar 15 09:37 result.tar.gz
09:37:26 (2298829): run_atlas exited; CPU time 17190.031445
09:37:26 (2298829): called boinc_finish(0)

</stderr_txt>
]]>

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