Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:42:10 (398089): wrapper (7.7.26015): starting
05:42:10 (398089): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 05:42:10] Arguments: --nthreads 4
[2026-03-15 05:42:10] Threads: 4
[2026-03-15 05:42:10] Checking for CVMFS
[2026-03-15 05:42:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 05:42:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 05:42:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 05:42:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 05:42:10] 2.9.2.0 79673 25229 106720 157302 0 50 30910212 36864000 0 130560 0 11862548 99.985 954675 10644 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 05:42:10] CVMFS is ok
[2026-03-15 05:42:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 05:42:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 05:42:10] Further information can be found at the LHC@home message board.
[2026-03-15 05:42:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 05:42:10] Checking for apptainer binary...
[2026-03-15 05:42:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 05:42:10] Running /usr/bin/apptainer --version
[2026-03-15 05:42:10] apptainer version 1.4.1-1.1
[2026-03-15 05:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 05:42:11] thA309
[2026-03-15 05:42:11] apptainer works
[2026-03-15 05:42:11] Set ATHENA_PROC_NUMBER=4
[2026-03-15 05:42:11] Set ATHENA_CORE_NUMBER=4
[2026-03-15 05:42:11] Starting ATLAS job with PandaID=7046922498
[2026-03-15 05:42:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:53:35]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:53:35] 
[2026-03-15 06:53:35] 2026-03-15 05:52:42,992 | INFO     | **************************************
[2026-03-15 06:53:35] 2026-03-15 05:52:43,495 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-15 06:53:35] 2026-03-15 05:52:43,514 | INFO     | sufficient remaining disk space (227666821120 B)
[2026-03-15 06:53:35] 2026-03-15 05:52:43,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:53:35] 2026-03-15 05:52:43,515 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:53:35] 2026-03-15 05:52:43,515 | INFO     | update_server=False
[2026-03-15 06:53:35] 2026-03-15 05:52:43,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:53:35] 2026-03-15 05:52:43,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:53:35] 2026-03-15 05:52:43,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:53:35] 2026-03-15 05:52:43,557 | INFO     | all data control threads have been joined
[2026-03-15 06:53:35] 2026-03-15 05:52:43,631 | INFO     | all job control threads have been joined
[2026-03-15 06:53:35] 2026-03-15 05:52:44,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:53:35] 2026-03-15 05:52:44,516 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:44,516 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:44,563 | INFO     | [data] control thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:44,585 | WARNING  | process 406724 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 06:53:35] 2026-03-15 05:52:44,620 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:53:35] 2026-03-15 05:52:44,637 | INFO     | [job] control thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:44,665 | INFO     | number of running child processes to parent process 406724: 1
[2026-03-15 06:53:35] 2026-03-15 05:52:44,665 | INFO     | maximum number of monitored processes: 6
[2026-03-15 06:53:35] 2026-03-15 05:52:44,665 | INFO     | aborting job monitoring since job object (job id=7046922498) has expired
[2026-03-15 06:53:35] 2026-03-15 05:52:44,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:53:35] 2026-03-15 05:52:44,665 | INFO     | will abort loop
[2026-03-15 06:53:35] 2026-03-15 05:52:44,968 | INFO     | all payload control threads have been joined
[2026-03-15 06:53:35] 2026-03-15 05:52:45,145 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,147 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,582 | INFO     | [job] validate thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,670 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,672 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,684 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,733 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,926 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:45,974 | INFO     | [payload] control thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:46,168 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:52:47,522 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:53:35] 2026-03-15 05:53:14,559 | INFO     | PID=402205 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 06:53:35] 2026-03-15 05:53:14,559 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:53:35] 2026-03-15 05:53:14,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:53:35] 2026-03-15 05:53:14,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:53:35] 2026-03-15 05:53:29,643 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:53:35] 2026-03-15 05:53:30,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418871138112)>', '<ExcThread(monitor, started 140417697830656)>']
[2026-03-15 06:53:35] 2026-03-15 05:53:31,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:53:35] 2026-03-15 05:53:31,651 | INFO     | [monitor] control thread has ended
[2026-03-15 06:53:35] 2026-03-15 05:53:35,672 | INFO     | all workflow threads have been joined
[2026-03-15 06:53:35] 2026-03-15 05:53:35,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:53:35] 2026-03-15 05:53:35,672 | INFO     | traces error code: 0
[2026-03-15 06:53:35] 2026-03-15 05:53:35,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:53:35] 2026-03-15 05:53:35,754 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:53:35] 2026-03-15 05:53:35,758 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:53:35] 2026-03-15 05:53:35,763 [wrapper] pilotpid: 402205
[2026-03-15 06:53:35] 2026-03-15 05:53:35,767 [wrapper] Pilot exit status: 0
[2026-03-15 06:53:35] 2026-03-15 05:53:35,779 [wrapper] pandaids: 7046922498
[2026-03-15 06:53:35] 2026-03-15 05:53:35,804 [wrapper] cleanup supervisor_pilot  412283 402206
[2026-03-15 06:53:35] 2026-03-15 05:53:35,807 [wrapper] Test setup, not cleaning
[2026-03-15 06:53:35] 2026-03-15 05:53:35,812 [wrapper] apfmon messages muted
[2026-03-15 06:53:35] 2026-03-15 05:53:35,815 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:53:35] 2026-03-15 05:53:35,819 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:53:35]  *** Error codes and diagnostics ***
[2026-03-15 06:53:35]     "exeErrorCode": 0,
[2026-03-15 06:53:35]     "exeErrorDiag": "",
[2026-03-15 06:53:35]     "pilotErrorCode": 0,
[2026-03-15 06:53:35]     "pilotErrorDiag": "",
[2026-03-15 06:53:35]  *** Listing of results directory ***
[2026-03-15 06:53:35] total 624176
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc    585013 Mar 14 16:02 pilot3.tar.gz
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc      5111 Mar 14 16:02 queuedata.json
[2026-03-15 06:53:35] -rwx------ 1 boinc boinc     36322 Mar 14 16:02 runpilot2-wrapper.sh
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc       100 Mar 15 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:53:35] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 05:42 run_atlas
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc       105 Mar 15 05:42 job.xml
[2026-03-15 06:53:35] -rw-r--r-- 2 boinc boinc 446018894 Mar 15 05:42 EVNT.46701403._001939.pool.root.1
[2026-03-15 06:53:35] -rw-r--r-- 2 boinc boinc    597525 Mar 15 05:42 input.tar.gz
[2026-03-15 06:53:35] -rw-r--r-- 2 boinc boinc     15845 Mar 15 05:42 start_atlas.sh
[2026-03-15 06:53:35] drwxrwx--x 2 boinc boinc      4096 Mar 15 05:42 shared
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc         0 Mar 15 05:42 boinc_setup_complete
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc      6376 Mar 15 05:42 init_data.xml
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc         0 Mar 15 05:42 boinc_lockfile
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc      2564 Mar 15 05:42 pandaJob.out
[2026-03-15 06:53:35] -rw------- 1 boinc boinc   1006481 Mar 15 05:42 agis_schedconf.cvmfs.json
[2026-03-15 06:53:35] -rw------- 1 boinc boinc   1511579 Mar 15 05:42 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:53:35] -rw------- 1 boinc boinc       421 Mar 15 05:42 workernode_map.json
[2026-03-15 06:53:35] drwx------ 5 boinc boinc      4096 Mar 15 05:42 pilot3
[2026-03-15 06:53:35] -rw------- 1 boinc boinc 187424994 Mar 15 06:52 HITS.48955010._045843.pool.root.1
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc       530 Mar 15 06:52 boinc_task_state.xml
[2026-03-15 06:53:35] -rw------- 1 boinc boinc      1017 Mar 15 06:52 memory_monitor_summary.json
[2026-03-15 06:53:35] -rw------- 1 boinc boinc    265007 Mar 15 06:52 log.48955010._045843.job.log.tgz.1
[2026-03-15 06:53:35] -rw------- 1 boinc boinc      6308 Mar 15 06:52 heartbeat.json
[2026-03-15 06:53:35] -rw------- 1 boinc boinc        95 Mar 15 06:53 pilot_heartbeat.json
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc        27 Mar 15 06:53 wrapper_checkpoint.txt
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc      8192 Mar 15 06:53 boinc_mmap_file
[2026-03-15 06:53:35] -rw------- 1 boinc boinc      5269 Mar 15 06:53 pilotlog.txt
[2026-03-15 06:53:35] -rw------- 1 boinc boinc    625176 Mar 15 06:53 log.48955010._045843.job.log.1
[2026-03-15 06:53:35] -rw------- 1 boinc boinc       357 Mar 15 06:53 output.list
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc       620 Mar 15 06:53 runtime_log
[2026-03-15 06:53:35] -rw------- 1 boinc boinc    911360 Mar 15 06:53 result.tar.gz
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc      8896 Mar 15 06:53 runtime_log.err
[2026-03-15 06:53:35] -rw------- 1 boinc boinc       657 Mar 15 06:53 epWLDmxgfL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIItLDm2J6vem.diag
[2026-03-15 06:53:35] -rw-r--r-- 1 boinc boinc      8614 Mar 15 06:53 stderr.txt
[2026-03-15 06:53:35] HITS file was successfully produced:
[2026-03-15 06:53:35] -rw------- 1 boinc boinc 187424994 Mar 15 06:52 shared/HITS.pool.root.1
[2026-03-15 06:53:35]  *** Contents of shared directory: ***
[2026-03-15 06:53:35] total 620104
[2026-03-15 06:53:35] -rw-r--r-- 2 boinc boinc 446018894 Mar 15 05:42 ATLAS.root_0
[2026-03-15 06:53:35] -rw-r--r-- 2 boinc boinc    597525 Mar 15 05:42 input.tar.gz
[2026-03-15 06:53:35] -rw-r--r-- 2 boinc boinc     15845 Mar 15 05:42 start_atlas.sh
[2026-03-15 06:53:35] -rw------- 1 boinc boinc 187424994 Mar 15 06:52 HITS.pool.root.1
[2026-03-15 06:53:35] -rw------- 1 boinc boinc    911360 Mar 15 06:53 result.tar.gz
06:53:36 (398089): run_atlas exited; CPU time 15511.250273
06:53:36 (398089): called boinc_finish(0)

</stderr_txt>
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