Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:55 (746731): wrapper (7.7.26015): starting
20:04:55 (746731): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 20:04:55] Arguments: --nthreads 4
[2026-03-15 20:04:55] Threads: 4
[2026-03-15 20:04:55] Checking for CVMFS
[2026-03-15 20:04:55] No cvmfs_config command found, will try listing directly
[2026-03-15 20:04:55] CVMFS is ok
[2026-03-15 20:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 20:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 20:04:55] Further information can be found at the LHC@home message board.
[2026-03-15 20:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 20:04:55] Checking for apptainer binary...
[2026-03-15 20:04:55] which: no apptainer in ((null))
[2026-03-15 20:04:55] apptainer is not installed, using version from CVMFS
[2026-03-15 20:04:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 20:04:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-15 20:04:55] apptainer works
[2026-03-15 20:04:55] Set ATHENA_PROC_NUMBER=4
[2026-03-15 20:04:55] Set ATHENA_CORE_NUMBER=4
[2026-03-15 20:04:55] Starting ATLAS job with PandaID=7046911094
[2026-03-15 20:04:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 21:17:19]  *** The last 200 lines of the pilot log: ***
[2026-03-15 21:17:19]  protocol_id=None
[2026-03-15 21:17:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 21:17:19]  replicas=None
[2026-03-15 21:17:19]  scope=mc23_13p6TeV
[2026-03-15 21:17:19]  status=None
[2026-03-15 21:17:19]  status_code=0
[2026-03-15 21:17:19]  storage_token=
[2026-03-15 21:17:19]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046911094/log.48955010._043240.job.log.tgz.1
[2026-03-15 21:17:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/42/log.48955010._043240.job.log.tgz.1
[2026-03-15 21:17:19]  workdir=None
[2026-03-15 21:17:19] ]
[2026-03-15 21:17:19] 2026-03-15 20:16:33,613 | INFO     | transferring file log.48955010._043240.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046911094/log.48955010._043240.job.log.tgz.1 to /var/lib/
[2026-03-15 21:17:19] 2026-03-15 20:16:33,613 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046911094/log.48955010._043240.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-15 21:17:19] 2026-03-15 20:16:33,627 | INFO     | time since job start (4286s) is within the limit (345600.0s)
[2026-03-15 21:17:19] 2026-03-15 20:16:33,627 | INFO     | adding to output.list: log.48955010._043240.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/42/log.48955010._043240.job.log.tg
[2026-03-15 21:17:19] 2026-03-15 20:16:33,628 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 21:17:19] 2026-03-15 20:16:33,628 | INFO     | summary of transferred files:
[2026-03-15 21:17:19] 2026-03-15 20:16:33,628 | INFO     |  -- lfn=log.48955010._043240.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 21:17:19] 2026-03-15 20:16:33,628 | INFO     | stage-out finished correctly
[2026-03-15 21:17:19] 2026-03-15 20:16:34,589 | WARNING  | process 757440 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 21:17:19] 2026-03-15 20:16:34,590 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046911094/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 21:17:19] 2026-03-15 20:16:35,019 | INFO     | number of running child processes to parent process 757440: 1
[2026-03-15 21:17:19] 2026-03-15 20:16:35,020 | INFO     | maximum number of monitored processes: 6
[2026-03-15 21:17:19] 2026-03-15 20:16:35,633 | INFO     | time since job start (4288s) is within the limit (345600.0s)
[2026-03-15 21:17:19] 2026-03-15 20:16:36,653 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 21:17:19] 2026-03-15 20:16:37,523 | INFO     | monitor loop #312: job 0:7046911094 is in state 'finished'
[2026-03-15 21:17:19] 2026-03-15 20:16:37,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 21:17:19] 2026-03-15 20:16:37,638 | INFO     | time since job start (4290s) is within the limit (345600.0s)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,389 | INFO     | job 7046911094 has state=finished
[2026-03-15 21:17:19] 2026-03-15 20:16:39,389 | INFO     | preparing for final server update for job 7046911094 in state='finished'
[2026-03-15 21:17:19] 2026-03-15 20:16:39,644 | INFO     | time since job start (4292s) is within the limit (345600.0s)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,943 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,943 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046911094/jobReport.json
[2026-03-15 21:17:19] 2026-03-15 20:16:39,944 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-15 21:17:19] 2026-03-15 20:16:39,945 | INFO     | this job has now completed (state=finished)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,945 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,945 | INFO     | log transfer has been attempted: DONE
[2026-03-15 21:17:19] 2026-03-15 20:16:39,945 | INFO     | job 7046911094 has finished - writing final server update
[2026-03-15 21:17:19] 2026-03-15 20:16:39,945 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3913135/.job.ad'
[2026-03-15 21:17:19] 2026-03-15 20:16:39,945 | INFO     | total number of processed events: 400 (read)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,963 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046911094/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,964 | INFO     | extracted standard info from prmon json
[2026-03-15 21:17:19] 2026-03-15 20:16:39,964 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 21:17:19] 2026-03-15 20:16:39,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 21:17:19] 2026-03-15 20:16:39,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 21:17:19] 2026-03-15 20:16:39,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | fitting pss+swap vs Time
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | sum of square deviations: 77515872.0
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | sum of deviations: -991112627.9999998
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | mean x: 1773603723.0
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | mean y: 2330665.8571428573
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | intersect: 22679506340.706207
[2026-03-15 21:17:19] 2026-03-15 20:16:39,965 | INFO     | chi2: 0.010291467327402597
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | current memory leak: -12.79 B/s (using 63 data points, chi2=0.01)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | could have reported an average CPU frequency of 3638 MHz (6 samples)
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | ..............................
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . Timing measurements:
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . get job = 0 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . initial setup = 4 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . payload setup = 4 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . stage-in = 0 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . payload execution = 4266 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . stage-out = 0 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | . log creation = 0 s
[2026-03-15 21:17:19] 2026-03-15 20:16:39,966 | INFO     | ..............................
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | 
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | job summary report
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | --------------------------------------------------
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | PanDA job id: 7046911094
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | task id: 48955010
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | errors: (none)
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | pilot state: finished 
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | transexitcode: 0
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | exeerrorcode: 0
[2026-03-15 21:17:19] 2026-03-15 20:16:40,331 | INFO     | exeerrordiag: 
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | exitcode: 0
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | exitmsg: OK
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | cpuconsumptiontime: 16384 s
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | nevents: 400
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | neventsw: 0
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | pid: 757440
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | pgrp: 757440
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | corecount: 4
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | event service: False
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | sizes: {0: 2280192, 11: 2280192, 4275: 2315235, 4278: 2315235, 4282: 2315429}
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | --------------------------------------------------
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | 
[2026-03-15 21:17:19] 2026-03-15 20:16:40,332 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-15 21:17:19] 2026-03-15 20:16:40,350 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,350 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,350 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,350 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | job 7046911094 has completed (purged errors)
[2026-03-15 21:17:19] 2026-03-15 20:16:40,351 | INFO     | overall cleanup function is called
[2026-03-15 21:17:19] 2026-03-15 20:16:41,357 | INFO     | --- collectZombieJob: --- 10, [757440]
[2026-03-15 21:17:19] 2026-03-15 20:16:41,358 | INFO     | zombie collector waiting for pid 757440
[2026-03-15 21:17:19] 2026-03-15 20:16:41,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 21:17:19] 2026-03-15 20:16:41,358 | INFO     | collected zombie processes
[2026-03-15 21:17:19] 2026-03-15 20:16:41,358 | INFO     | will attempt to kill all subprocesses of pid=757440
[2026-03-15 21:17:19] 2026-03-15 20:16:41,793 | INFO     | process IDs to be killed: [757440] (in reverse order)
[2026-03-15 21:17:19] 2026-03-15 20:16:41,986 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 21:17:19] 2026-03-15 20:16:41,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 21:17:19] 2026-03-15 20:16:42,015 | INFO     | did not find any defunct processes belonging to 757440
[2026-03-15 21:17:19] 2026-03-15 20:16:42,043 | INFO     | did not find any defunct processes belonging to 757440
[2026-03-15 21:17:19] 2026-03-15 20:16:42,043 | INFO     | ready for new job
[2026-03-15 21:17:19] 2026-03-15 20:16:42,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 21:17:19] 2026-03-15 20:16:42,044 | INFO     | **************************************
[2026-03-15 21:17:19] 2026-03-15 20:16:42,045 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 21:17:19] 2026-03-15 20:16:42,045 | INFO     | **************************************
[2026-03-15 21:17:19] 2026-03-15 20:16:42,045 | INFO     | 
[2026-03-15 21:17:19] 2026-03-15 20:16:42,050 | INFO     | architecture information:
[2026-03-15 21:17:19] 2026-03-15 20:16:42,050 | INFO     | executing command: cat /etc/os-release
[2026-03-15 21:17:19] 2026-03-15 20:16:42,066 | INFO     | cat /etc/os-release:
[2026-03-15 21:17:19] NAME="CentOS Linux"
[2026-03-15 21:17:19] VERSION="7 (Core)"
[2026-03-15 21:17:19] ID="centos"
[2026-03-15 21:17:19] ID_LIKE="rhel fedora"
[2026-03-15 21:17:19] VERSION_ID="7"
[2026-03-15 21:17:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 21:17:19] ANSI_COLOR="0;31"
[2026-03-15 21:17:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 21:17:19] HOME_URL="https://www.centos.org/"
[2026-03-15 21:17:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 21:17:19] 
[2026-03-15 21:17:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 21:17:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 21:17:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 21:17:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 21:17:19] 
[2026-03-15 21:17:19] 2026-03-15 20:16:42,066 | INFO     | **************************************
[2026-03-15 21:17:19] 2026-03-15 20:16:42,569 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-15 21:17:19] 2026-03-15 20:16:42,584 | INFO     | sufficient remaining disk space (186307837952 B)
[2026-03-15 21:17:19] 2026-03-15 20:16:42,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 21:17:19] 2026-03-15 20:16:42,584 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 21:17:19] 2026-03-15 20:16:42,584 | INFO     | update_server=False
[2026-03-15 21:17:19] 2026-03-15 20:16:42,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 21:17:19] 2026-03-15 20:16:42,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 21:17:19] 2026-03-15 20:16:42,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 21:17:19] 2026-03-15 20:16:42,740 | INFO     | all payload control threads have been joined
[2026-03-15 21:17:19] 2026-03-15 20:16:43,125 | INFO     | all job control threads have been joined
[2026-03-15 21:17:19] 2026-03-15 20:16:43,334 | INFO     | all data control threads have been joined
[2026-03-15 21:17:19] 2026-03-15 20:16:43,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 21:17:19] 2026-03-15 20:16:43,534 | INFO     | aborting loop
[2026-03-15 21:17:19] 2026-03-15 20:16:43,589 | INFO     | [job] retrieve thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:43,746 | INFO     | [payload] control thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,131 | INFO     | [job] control thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,336 | INFO     | [data] control thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,378 | INFO     | [payload] failed_post thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,397 | INFO     | [job] validate thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,400 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,400 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,438 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,539 | INFO     | [job] job monitor thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,590 | INFO     | [data] copytool_out thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,798 | INFO     | [data] copytool_in thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:44,895 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:45,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 21:17:19] 2026-03-15 20:16:45,128 | INFO     | [payload] validate_post thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:46,012 | INFO     | [job] queue monitor thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:16:46,710 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 21:17:19] 2026-03-15 20:17:13,257 | INFO     | PID=751329 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 21:17:19] 2026-03-15 20:17:13,260 | INFO     | .. there are 39 such processes running
[2026-03-15 21:17:19] 2026-03-15 20:17:13,260 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 21:17:19] 2026-03-15 20:17:13,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 21:17:19] 2026-03-15 20:17:13,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 21:17:19] 2026-03-15 20:17:13,400 | INFO     | [monitor] cgroup control has ended
[2026-03-15 21:17:19] 2026-03-15 20:17:14,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23258797627200)>', '<ExcThread(monitor, started 23258555750144)>']
[2026-03-15 21:17:19] 2026-03-15 20:17:15,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 21:17:19] 2026-03-15 20:17:15,268 | INFO     | [monitor] control thread has ended
[2026-03-15 21:17:19] 2026-03-15 20:17:19,430 | INFO     | all workflow threads have been joined
[2026-03-15 21:17:19] 2026-03-15 20:17:19,431 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 21:17:19] 2026-03-15 20:17:19,431 | INFO     | traces error code: 0
[2026-03-15 21:17:19] 2026-03-15 20:17:19,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 21:17:19] 2026-03-15 20:17:19,607 [wrapper] ==== pilot stdout END ====
[2026-03-15 21:17:19] 2026-03-15 20:17:19,610 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 21:17:19] 2026-03-15 20:17:19,612 [wrapper] pilotpid: 751329
[2026-03-15 21:17:19] 2026-03-15 20:17:19,613 [wrapper] Pilot exit status: 0
[2026-03-15 21:17:19] 2026-03-15 20:17:19,621 [wrapper] pandaids: 7046911094
[2026-03-15 21:17:19] 2026-03-15 20:17:19,743 [wrapper] cleanup supervisor_pilot 1233183 751330
[2026-03-15 21:17:19] 2026-03-15 20:17:19,746 [wrapper] Test setup, not cleaning
[2026-03-15 21:17:19] 2026-03-15 20:17:19,748 [wrapper] apfmon messages muted
[2026-03-15 21:17:19] 2026-03-15 20:17:19,751 [wrapper] ==== wrapper stdout END ====
[2026-03-15 21:17:19] 2026-03-15 20:17:19,753 [wrapper] ==== wrapper stderr END ====
[2026-03-15 21:17:19]  *** Error codes and diagnostics ***
[2026-03-15 21:17:19]     "exeErrorCode": 0,
[2026-03-15 21:17:19]     "exeErrorDiag": "",
[2026-03-15 21:17:19]     "pilotErrorCode": 0,
[2026-03-15 21:17:19]     "pilotErrorDiag": "",
[2026-03-15 21:17:19]  *** Listing of results directory ***
[2026-03-15 21:17:19] total 616284
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc    585013 Mar 14 14:10 pilot3.tar.gz
[2026-03-15 21:17:19] -rwx------. 1 boinc boinc     36322 Mar 14 14:13 runpilot2-wrapper.sh
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc      5111 Mar 14 14:17 queuedata.json
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc       100 Mar 15 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 21:17:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 20:04 run_atlas
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc       105 Mar 15 20:04 job.xml
[2026-03-15 21:17:19] -rw-r--r--. 2 boinc boinc 443842291 Mar 15 20:04 EVNT.46701403._001885.pool.root.1
[2026-03-15 21:17:19] -rw-r--r--. 2 boinc boinc     15845 Mar 15 20:04 start_atlas.sh
[2026-03-15 21:17:19] drwxrwx--x. 2 boinc boinc      4096 Mar 15 20:04 shared
[2026-03-15 21:17:19] -rw-r--r--. 2 boinc boinc    597527 Mar 15 20:04 input.tar.gz
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc      6710 Mar 15 20:04 init_data.xml
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc         0 Mar 15 20:04 boinc_lockfile
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc      2564 Mar 15 20:04 pandaJob.out
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc   1006473 Mar 15 20:05 agis_schedconf.cvmfs.json
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc   1511579 Mar 15 20:05 agis_ddmendpoints.agis.ALL.json
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc       444 Mar 15 20:05 workernode_map.json
[2026-03-15 21:17:19] drwx------. 5 boinc boinc      4096 Mar 15 20:05 pilot3
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc 181492443 Mar 15 21:16 HITS.48955010._043240.pool.root.1
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc      1031 Mar 15 21:16 memory_monitor_summary.json
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc    264265 Mar 15 21:16 log.48955010._043240.job.log.tgz.1
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc       530 Mar 15 21:16 boinc_task_state.xml
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc      6356 Mar 15 21:16 heartbeat.json
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc        95 Mar 15 21:16 pilot_heartbeat.json
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc      8192 Mar 15 21:17 boinc_mmap_file
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc        27 Mar 15 21:17 wrapper_checkpoint.txt
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc      4830 Mar 15 21:17 pilotlog.txt
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc    637178 Mar 15 21:17 log.48955010._043240.job.log.1
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc       357 Mar 15 21:17 output.list
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc       620 Mar 15 21:17 runtime_log
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc    921600 Mar 15 21:17 result.tar.gz
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc      9221 Mar 15 21:17 runtime_log.err
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc       662 Mar 15 21:17 qXbLDmrydL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYSqLDmTKw7gn.diag
[2026-03-15 21:17:19] -rw-r--r--. 1 boinc boinc     21700 Mar 15 21:17 stderr.txt
[2026-03-15 21:17:19] HITS file was successfully produced:
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc 181492443 Mar 15 21:16 shared/HITS.pool.root.1
[2026-03-15 21:17:19]  *** Contents of shared directory: ***
[2026-03-15 21:17:19] total 612188
[2026-03-15 21:17:19] -rw-r--r--. 2 boinc boinc 443842291 Mar 15 20:04 ATLAS.root_0
[2026-03-15 21:17:19] -rw-r--r--. 2 boinc boinc     15845 Mar 15 20:04 start_atlas.sh
[2026-03-15 21:17:19] -rw-r--r--. 2 boinc boinc    597527 Mar 15 20:04 input.tar.gz
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc 181492443 Mar 15 21:16 HITS.pool.root.1
[2026-03-15 21:17:19] -rw-------. 1 boinc boinc    921600 Mar 15 21:17 result.tar.gz
21:17:21 (746731): run_atlas exited; CPU time 16571.867060
21:17:21 (746731): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN