Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:56:30 (1840): wrapper (7.7.26015): starting
02:56:30 (1840): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 02:56:30] Arguments: --nthreads 8
[2026-03-15 02:56:30] Threads: 8
[2026-03-15 02:56:30] Checking for CVMFS
[2026-03-15 02:56:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 02:56:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 02:56:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 02:56:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 02:56:34] 2.11.2.0 1035 128384 135612 157297 0 54 16053384 25165825 4652 130560 160 37848525 99.811 28314331 1002 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 02:56:34] CVMFS is ok
[2026-03-15 02:56:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 02:56:34] Checking for apptainer binary...
[2026-03-15 02:56:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 02:56:34] Running /usr/bin/apptainer --version
[2026-03-15 02:56:34] apptainer version 1.3.2-1.el7
[2026-03-15 02:56:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 02:56:50] cg-vwn358.simple-grid.lan
[2026-03-15 02:56:50] apptainer works
[2026-03-15 02:56:50] Set ATHENA_PROC_NUMBER=8
[2026-03-15 02:56:50] Set ATHENA_CORE_NUMBER=8
[2026-03-15 02:56:50] Starting ATLAS job with PandaID=7046915915
[2026-03-15 02:56:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:59:28]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:59:28] 2026-03-15 05:58:25,856 | INFO     | job 7046915915 has finished - writing final server update
[2026-03-15 06:59:28] 2026-03-15 05:58:25,856 | INFO     | total number of processed events: 400 (read)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,858 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7046915915/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,859 | INFO     | extracted standard info from prmon json
[2026-03-15 06:59:28] 2026-03-15 05:58:25,859 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 06:59:28] 2026-03-15 05:58:25,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 06:59:28] 2026-03-15 05:58:25,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 06:59:28] 2026-03-15 05:58:25,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 06:59:28] 2026-03-15 05:58:25,865 | INFO     | fitting pss+swap vs Time
[2026-03-15 06:59:28] 2026-03-15 05:58:25,866 | INFO     | sum of square deviations: 3675146117.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,868 | INFO     | sum of deviations: 85546032780.00002
[2026-03-15 06:59:28] 2026-03-15 05:58:25,868 | INFO     | mean x: 1773547321.5
[2026-03-15 06:59:28] 2026-03-15 05:58:25,868 | INFO     | mean y: 2425621.964912281
[2026-03-15 06:59:28] 2026-03-15 05:58:25,868 | INFO     | intersect: -41280269670.09828
[2026-03-15 06:59:28] 2026-03-15 05:58:25,869 | INFO     | chi2: 6.2280056164875806
[2026-03-15 06:59:28] 2026-03-15 05:58:25,869 | INFO     | sum of square deviations: 3438620752.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,871 | INFO     | sum of deviations: 98565834715.99998
[2026-03-15 06:59:28] 2026-03-15 05:58:25,872 | INFO     | mean x: 1773547169.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,872 | INFO     | mean y: 2433843.2825112105
[2026-03-15 06:59:28] 2026-03-15 05:58:25,872 | INFO     | intersect: -50835146026.206894
[2026-03-15 06:59:28] 2026-03-15 05:58:25,872 | INFO     | chi2: 5.499294300104255
[2026-03-15 06:59:28] 2026-03-15 05:58:25,872 | INFO     | current chi2=5.499294300104255 (change=11.700556506471136 %)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,872 | INFO     | right removable region: 222
[2026-03-15 06:59:28] 2026-03-15 05:58:25,873 | INFO     | sum of square deviations: 3438620752.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,878 | INFO     | sum of deviations: 9414772024.999998
[2026-03-15 06:59:28] 2026-03-15 05:58:25,878 | INFO     | mean x: 1773547474.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,878 | INFO     | mean y: 2474652.3139013452
[2026-03-15 06:59:28] 2026-03-15 05:58:25,878 | INFO     | intersect: -4853409827.971644
[2026-03-15 06:59:28] 2026-03-15 05:58:25,879 | INFO     | chi2: 1.7480079946367002
[2026-03-15 06:59:28] 2026-03-15 05:58:25,879 | INFO     | current chi2=1.7480079946367002 (change=71.9331018262227 %)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,879 | INFO     | sum of square deviations: 3212467674.5
[2026-03-15 06:59:28] 2026-03-15 05:58:25,881 | INFO     | sum of deviations: -23082458712.499992
[2026-03-15 06:59:28] 2026-03-15 05:58:25,882 | INFO     | mean x: 1773547626.5
[2026-03-15 06:59:28] 2026-03-15 05:58:25,882 | INFO     | mean y: 2496446.9587155962
[2026-03-15 06:59:28] 2026-03-15 05:58:25,882 | INFO     | intersect: 12745921132.067904
[2026-03-15 06:59:28] 2026-03-15 05:58:25,882 | INFO     | chi2: 0.8297042195828103
[2026-03-15 06:59:28] 2026-03-15 05:58:25,882 | INFO     | current chi2=0.8297042195828103 (change=52.53430063657958 %)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,883 | INFO     | sum of square deviations: 2996454322.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,885 | INFO     | sum of deviations: -25353197163.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,885 | INFO     | mean x: 1773547779.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,885 | INFO     | mean y: 2498021.262910798
[2026-03-15 06:59:28] 2026-03-15 05:58:25,885 | INFO     | intersect: 15008602465.723637
[2026-03-15 06:59:28] 2026-03-15 05:58:25,886 | INFO     | chi2: 0.8108545562664898
[2026-03-15 06:59:28] 2026-03-15 05:58:25,886 | INFO     | current chi2=0.8108545562664898 (change=2.271853375145949 %)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,886 | INFO     | left removable region: 30
[2026-03-15 06:59:28] 2026-03-15 05:58:25,886 | INFO     | sum of square deviations: 2194675568.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,888 | INFO     | sum of deviations: -7611794293.0
[2026-03-15 06:59:28] 2026-03-15 05:58:25,888 | INFO     | mean x: 1773548053.5
[2026-03-15 06:59:28] 2026-03-15 05:58:25,888 | INFO     | mean y: 2505965.375
[2026-03-15 06:59:28] 2026-03-15 05:58:25,889 | INFO     | intersect: 6153703504.013913
[2026-03-15 06:59:28] 2026-03-15 05:58:25,889 | INFO     | chi2: 0.014113159584063163
[2026-03-15 06:59:28] 2026-03-15 05:58:25,889 | INFO     | current memory leak: -3.47 B/s (using 192 data points, chi2=0.01)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,890 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-15 06:59:28] 2026-03-15 05:58:25,890 | INFO     | ..............................
[2026-03-15 06:59:28] 2026-03-15 05:58:25,890 | INFO     | . Timing measurements:
[2026-03-15 06:59:28] 2026-03-15 05:58:25,890 | INFO     | . get job = 0 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,890 | INFO     | . initial setup = 102 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,891 | INFO     | . payload setup = 145 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,891 | INFO     | . stage-in = 0 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,891 | INFO     | . payload execution = 14021 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,891 | INFO     | . stage-out = 3 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,891 | INFO     | . log creation = 1 s
[2026-03-15 06:59:28] 2026-03-15 05:58:25,891 | INFO     | ..............................
[2026-03-15 06:59:28] 2026-03-15 05:58:26,044 | INFO     | 
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | job summary report
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | --------------------------------------------------
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | PanDA job id: 7046915915
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | task id: 48955010
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | errors: (none)
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | pilot state: finished 
[2026-03-15 06:59:28] 2026-03-15 05:58:26,045 | INFO     | transexitcode: 0
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | exeerrorcode: 0
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | exeerrordiag: 
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | exitcode: 0
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | exitmsg: OK
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | cpuconsumptiontime: 54021 s
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | nevents: 400
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | neventsw: 0
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | pid: 10416
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | pgrp: 10416
[2026-03-15 06:59:28] 2026-03-15 05:58:26,046 | INFO     | corecount: 8
[2026-03-15 06:59:28] 2026-03-15 05:58:26,047 | INFO     | event service: False
[2026-03-15 06:59:28] 2026-03-15 05:58:26,047 | INFO     | sizes: {0: 2279693, 1: 2280150, 2: 2280210, 12: 2280238, 14170: 2310649, 14171: 2310648, 14174: 2319830, 14176: 2319886, 14179: 2320108}
[2026-03-15 06:59:28] 2026-03-15 05:58:26,047 | INFO     | --------------------------------------------------
[2026-03-15 06:59:28] 2026-03-15 05:58:26,047 | INFO     | 
[2026-03-15 06:59:28] 2026-03-15 05:58:26,047 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-15 06:59:28] 2026-03-15 05:58:26,087 | INFO     | time since job start (14191s) is within the limit (345600.0s)
[2026-03-15 06:59:28] 2026-03-15 05:58:26,355 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,356 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,356 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 06:59:28] 2026-03-15 05:58:26,362 | INFO     | job 7046915915 has completed (purged errors)
[2026-03-15 06:59:28] 2026-03-15 05:58:26,363 | INFO     | overall cleanup function is called
[2026-03-15 06:59:28] 2026-03-15 05:58:27,370 | INFO     | --- collectZombieJob: --- 10, [10416]
[2026-03-15 06:59:28] 2026-03-15 05:58:27,371 | INFO     | zombie collector waiting for pid 10416
[2026-03-15 06:59:28] 2026-03-15 05:58:27,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 06:59:28] 2026-03-15 05:58:27,371 | INFO     | collected zombie processes
[2026-03-15 06:59:28] 2026-03-15 05:58:27,371 | INFO     | will attempt to kill all subprocesses of pid=10416
[2026-03-15 06:59:28] 2026-03-15 05:58:27,485 | INFO     | process IDs to be killed: [10416] (in reverse order)
[2026-03-15 06:59:28] 2026-03-15 05:58:28,420 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 06:59:28] 2026-03-15 05:58:28,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 06:59:28] 2026-03-15 05:58:28,423 | INFO     | did not find any defunct processes belonging to 10416
[2026-03-15 06:59:28] 2026-03-15 05:58:28,426 | INFO     | did not find any defunct processes belonging to 10416
[2026-03-15 06:59:28] 2026-03-15 05:58:28,426 | INFO     | ready for new job
[2026-03-15 06:59:28] 2026-03-15 05:58:28,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 06:59:28] 2026-03-15 05:58:28,429 | INFO     | **************************************
[2026-03-15 06:59:28] 2026-03-15 05:58:28,429 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 06:59:28] 2026-03-15 05:58:28,429 | INFO     | **************************************
[2026-03-15 06:59:28] 2026-03-15 05:58:28,429 | INFO     | 
[2026-03-15 06:59:28] 2026-03-15 05:58:28,430 | INFO     | pilot is running in a VM
[2026-03-15 06:59:28] 2026-03-15 05:58:28,430 | INFO     | architecture information:
[2026-03-15 06:59:28] 2026-03-15 05:58:28,446 | INFO     | executing command: cat /etc/os-release
[2026-03-15 06:59:28] 2026-03-15 05:58:28,592 | INFO     | cat /etc/os-release:
[2026-03-15 06:59:28] NAME="CentOS Linux"
[2026-03-15 06:59:28] VERSION="7 (Core)"
[2026-03-15 06:59:28] ID="centos"
[2026-03-15 06:59:28] ID_LIKE="rhel fedora"
[2026-03-15 06:59:28] VERSION_ID="7"
[2026-03-15 06:59:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 06:59:28] ANSI_COLOR="0;31"
[2026-03-15 06:59:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 06:59:28] HOME_URL="https://www.centos.org/"
[2026-03-15 06:59:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 06:59:28] 
[2026-03-15 06:59:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 06:59:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 06:59:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 06:59:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 06:59:28] 
[2026-03-15 06:59:28] 2026-03-15 05:58:28,592 | INFO     | **************************************
[2026-03-15 06:59:28] 2026-03-15 05:58:29,096 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-15 06:59:28] 2026-03-15 05:58:29,247 | INFO     | sufficient remaining disk space (495790850048 B)
[2026-03-15 06:59:28] 2026-03-15 05:58:29,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:59:28] 2026-03-15 05:58:29,248 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:59:28] 2026-03-15 05:58:29,248 | INFO     | update_server=False
[2026-03-15 06:59:28] 2026-03-15 05:58:29,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:59:28] 2026-03-15 05:58:29,380 | INFO     | all payload control threads have been joined
[2026-03-15 06:59:28] 2026-03-15 05:58:29,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:59:28] 2026-03-15 05:58:29,504 | INFO     | all job control threads have been joined
[2026-03-15 06:59:28] 2026-03-15 05:58:29,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:59:28] 2026-03-15 05:58:30,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:59:28] 2026-03-15 05:58:30,029 | INFO     | aborting loop
[2026-03-15 06:59:28] 2026-03-15 05:58:30,081 | INFO     | all data control threads have been joined
[2026-03-15 06:59:28] 2026-03-15 05:58:30,253 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:30,354 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:30,387 | INFO     | [payload] control thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:30,511 | INFO     | [job] control thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:30,537 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:30,588 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:30,799 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,035 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,053 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:59:28] 2026-03-15 05:58:31,087 | INFO     | [data] control thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,216 | INFO     | [job] validate thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,288 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,699 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:31,712 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:32,063 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:33,463 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:59:28] 2026-03-15 05:58:59,302 | INFO     | PID=5928 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 06:59:28] 2026-03-15 05:58:59,302 | INFO     | .. there are 9 such processes running
[2026-03-15 06:59:28] 2026-03-15 05:58:59,303 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:59:28] 2026-03-15 05:58:59,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:59:28] 2026-03-15 05:58:59,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:59:28] 2026-03-15 05:59:19,107 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:59:28] 2026-03-15 05:59:19,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662210316096)>', '<ExcThread(monitor, started 139661397718784)>']
[2026-03-15 06:59:28] 2026-03-15 05:59:19,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:59:28] 2026-03-15 05:59:19,421 | INFO     | [monitor] control thread has ended
[2026-03-15 06:59:28] 2026-03-15 05:59:24,329 | INFO     | all workflow threads have been joined
[2026-03-15 06:59:28] 2026-03-15 05:59:24,330 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:59:28] 2026-03-15 05:59:24,330 | INFO     | traces error code: 0
[2026-03-15 06:59:28] 2026-03-15 05:59:24,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:59:28] 2026-03-15 05:59:24,564 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:59:28] 2026-03-15 05:59:24,593 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:59:28] 2026-03-15 05:59:24,616 [wrapper] pilotpid: 5928
[2026-03-15 06:59:28] 2026-03-15 05:59:24,646 [wrapper] Pilot exit status: 0
[2026-03-15 06:59:28] 2026-03-15 05:59:25,118 [wrapper] pandaids: 7046915915
[2026-03-15 06:59:28] 2026-03-15 05:59:25,643 [wrapper] cleanup supervisor_pilot 17934 5929
[2026-03-15 06:59:28] 2026-03-15 05:59:25,701 [wrapper] Test setup, not cleaning
[2026-03-15 06:59:28] 2026-03-15 05:59:25,801 [wrapper] apfmon messages muted
[2026-03-15 06:59:28] 2026-03-15 05:59:25,857 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:59:28] 2026-03-15 05:59:25,957 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:59:28]  *** Error codes and diagnostics ***
[2026-03-15 06:59:28]     "exeErrorCode": 0,
[2026-03-15 06:59:28]     "exeErrorDiag": "",
[2026-03-15 06:59:28]     "pilotErrorCode": 0,
[2026-03-15 06:59:28]     "pilotErrorDiag": "",
[2026-03-15 06:59:28]  *** Listing of results directory ***
[2026-03-15 06:59:28] total 618804
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc    585013 Mar 14 14:10 pilot3.tar.gz
[2026-03-15 06:59:28] -rwx------. 1 boinc boinc     36322 Mar 14 14:13 runpilot2-wrapper.sh
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc      5111 Mar 14 14:18 queuedata.json
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc       100 Mar 15 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:59:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 02:56 run_atlas
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc       105 Mar 15 02:56 job.xml
[2026-03-15 06:59:28] -rw-r--r--. 2 boinc boinc 439340363 Mar 15 02:56 EVNT.46701403._001909.pool.root.1
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc      6391 Mar 15 02:56 init_data.xml
[2026-03-15 06:59:28] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:56 start_atlas.sh
[2026-03-15 06:59:28] drwxrwx--x. 2 boinc boinc        68 Mar 15 02:56 shared
[2026-03-15 06:59:28] -rw-r--r--. 2 boinc boinc    597517 Mar 15 02:56 input.tar.gz
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc         0 Mar 15 02:56 boinc_lockfile
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc      2565 Mar 15 02:56 pandaJob.out
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc       415 Mar 15 03:01 workernode_map.json
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc   1006481 Mar 15 03:01 agis_schedconf.cvmfs.json
[2026-03-15 06:59:28] drwx------. 5 boinc boinc      4096 Mar 15 03:01 pilot3
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc 185480504 Mar 15 06:57 HITS.48955010._044403.pool.root.1
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc       532 Mar 15 06:57 boinc_task_state.xml
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc      1013 Mar 15 06:58 memory_monitor_summary.json
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc   1511579 Mar 15 06:58 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc    478668 Mar 15 06:58 log.48955010._044403.job.log.tgz.1
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc      6324 Mar 15 06:58 heartbeat.json
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc        95 Mar 15 06:58 pilot_heartbeat.json
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc      8192 Mar 15 06:59 boinc_mmap_file
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc        28 Mar 15 06:59 wrapper_checkpoint.txt
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc      4879 Mar 15 06:59 pilotlog.txt
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc   1977715 Mar 15 06:59 log.48955010._044403.job.log.1
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc       357 Mar 15 06:59 output.list
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc       620 Mar 15 06:59 runtime_log
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc   2478080 Mar 15 06:59 result.tar.gz
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc      8816 Mar 15 06:59 runtime_log.err
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc       656 Mar 15 06:59 k0pNDm8ydL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRUqLDmTVCYhm.diag
[2026-03-15 06:59:28] -rw-r--r--. 1 boinc boinc     20740 Mar 15 06:59 stderr.txt
[2026-03-15 06:59:28] HITS file was successfully produced:
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc 185480504 Mar 15 06:57 shared/HITS.pool.root.1
[2026-03-15 06:59:28]  *** Contents of shared directory: ***
[2026-03-15 06:59:28] total 613200
[2026-03-15 06:59:28] -rw-r--r--. 2 boinc boinc 439340363 Mar 15 02:56 ATLAS.root_0
[2026-03-15 06:59:28] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:56 start_atlas.sh
[2026-03-15 06:59:28] -rw-r--r--. 2 boinc boinc    597517 Mar 15 02:56 input.tar.gz
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc 185480504 Mar 15 06:57 HITS.pool.root.1
[2026-03-15 06:59:28] -rw-------. 1 boinc boinc   2478080 Mar 15 06:59 result.tar.gz
06:59:29 (1840): run_atlas exited; CPU time 54239.990888
06:59:29 (1840): called boinc_finish(0)

</stderr_txt>
]]>

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