Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:28:00 (31924): wrapper (7.7.26015): starting
22:28:00 (31924): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 22:28:00] Arguments: --nthreads 8
[2026-03-14 22:28:00] Threads: 8
[2026-03-14 22:28:00] Checking for CVMFS
[2026-03-14 22:28:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 22:28:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 22:28:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 22:28:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 22:28:35] 2.11.0.0 5727 14987 41156 157290 1 29 3361039 4095972 293 130560 0 56310 97.910 543155 233 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-14 22:28:35] CVMFS is ok
[2026-03-14 22:28:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 22:28:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 22:28:35] Further information can be found at the LHC@home message board.
[2026-03-14 22:28:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 22:28:35] Checking for apptainer binary...
[2026-03-14 22:28:35] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-14 22:28:35] apptainer is not installed, using version from CVMFS
[2026-03-14 22:28:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 22:28:59] WARNING: Environment variable TMPDIR already has value [/tmp/job_11310398/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node110
[2026-03-14 22:28:59] apptainer works
[2026-03-14 22:28:59] Set ATHENA_PROC_NUMBER=8
[2026-03-14 22:28:59] Set ATHENA_CORE_NUMBER=8
[2026-03-14 22:28:59] Starting ATLAS job with PandaID=7045292571
[2026-03-14 22:28:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11310398/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 23:44:44]  *** The last 200 lines of the pilot log: ***
[2026-03-14 23:44:44]  direct_access_wan=False
[2026-03-14 23:44:44]  domain=
[2026-03-14 23:44:44]  filesize=336449
[2026-03-14 23:44:44]  filetype=log
[2026-03-14 23:44:44]  guid=fae5f8cb-e9bd-4f93-a0e0-d03c6fed4911
[2026-03-14 23:44:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 23:44:44]  is_altstaged=None
[2026-03-14 23:44:44]  is_tar=False
[2026-03-14 23:44:44]  lfn=log.48955010._036015.job.log.tgz.1
[2026-03-14 23:44:44]  mtime=0
[2026-03-14 23:44:44]  protocol_id=None
[2026-03-14 23:44:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 23:44:44]  replicas=None
[2026-03-14 23:44:44]  scope=mc23_13p6TeV
[2026-03-14 23:44:44]  status=None
[2026-03-14 23:44:44]  status_code=0
[2026-03-14 23:44:44]  storage_token=
[2026-03-14 23:44:44]  surl=/tmp/job_11310398/atlas/pilot/slots/0/PanDA_Pilot-7045292571/log.48955010._036015.job.log.tgz.1
[2026-03-14 23:44:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/29/log.48955010._036015.job.log.tgz.1
[2026-03-14 23:44:44]  workdir=None
[2026-03-14 23:44:44] ]
[2026-03-14 23:44:44] 2026-03-14 22:44:09,596 | INFO     | transferring file log.48955010._036015.job.log.tgz.1 from /tmp/job_11310398/atlas/pilot/slots/0/PanDA_Pilot-7045292571/log.48955010._036015.job.log.tgz.1 to /tmp/j
[2026-03-14 23:44:44] 2026-03-14 22:44:09,596 | INFO     | executing command: /usr/bin/env mv /tmp/job_11310398/atlas/pilot/slots/0/PanDA_Pilot-7045292571/log.48955010._036015.job.log.tgz.1 /tmp/job_11310398/atlas/pilot/sl
[2026-03-14 23:44:44] 2026-03-14 22:44:09,604 | INFO     | adding to output.list: log.48955010._036015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/29/log.48955010._036015.job.log.tg
[2026-03-14 23:44:44] 2026-03-14 22:44:09,605 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 23:44:44] 2026-03-14 22:44:09,605 | INFO     | summary of transferred files:
[2026-03-14 23:44:44] 2026-03-14 22:44:09,605 | INFO     |  -- lfn=log.48955010._036015.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 23:44:44] 2026-03-14 22:44:09,605 | INFO     | stage-out finished correctly
[2026-03-14 23:44:44] 2026-03-14 22:44:10,459 | INFO     | time since job start (4418s) is within the limit (345600.0s)
[2026-03-14 23:44:44] 2026-03-14 22:44:10,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 23:44:44] 2026-03-14 22:44:11,487 | INFO     | job 7045292571 has state=finished
[2026-03-14 23:44:44] 2026-03-14 22:44:11,487 | INFO     | preparing for final server update for job 7045292571 in state='finished'
[2026-03-14 23:44:44] 2026-03-14 22:44:11,487 | INFO     | reading metadata from: /tmp/job_11310398/atlas/pilot/slots/0/PanDA_Pilot-7045292571/jobReport.json
[2026-03-14 23:44:44] 2026-03-14 22:44:11,488 | INFO     | added worker_node to metadata from /tmp/job_11310398/atlas/pilot/slots/0/workernode_map.json
[2026-03-14 23:44:44] 2026-03-14 22:44:11,488 | INFO     | this job has now completed (state=finished)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,488 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,488 | INFO     | log transfer has been attempted: DONE
[2026-03-14 23:44:44] 2026-03-14 22:44:11,488 | INFO     | job 7045292571 has finished - writing final server update
[2026-03-14 23:44:44] 2026-03-14 22:44:11,489 | INFO     | total number of processed events: 400 (read)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,505 | INFO     | using path: /tmp/job_11310398/atlas/pilot/slots/0/PanDA_Pilot-7045292571/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,505 | INFO     | extracted standard info from prmon json
[2026-03-14 23:44:44] 2026-03-14 22:44:11,505 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 23:44:44] 2026-03-14 22:44:11,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 23:44:44] 2026-03-14 22:44:11,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 23:44:44] 2026-03-14 22:44:11,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 23:44:44] 2026-03-14 22:44:11,506 | INFO     | fitting pss+swap vs Time
[2026-03-14 23:44:44] 2026-03-14 22:44:11,506 | INFO     | sum of square deviations: 85136480.0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | sum of deviations: 58856770673.0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | mean x: 1773526132.0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | mean y: 1835846.6153846155
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | intersect: -1226076818494.0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | chi2: 8.627734122416111
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | current memory leak: 691.32 B/s (using 65 data points, chi2=8.63)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | could have reported an average CPU frequency of 2474 MHz (6 samples)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | ..............................
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . Timing measurements:
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . get job = 0 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . initial setup = 2 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . payload setup = 28 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . stage-in = 0 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . payload execution = 4373 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . stage-out = 0 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | . log creation = 0 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,507 | INFO     | ..............................
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | 
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | job summary report
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | --------------------------------------------------
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | PanDA job id: 7045292571
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | task id: 48955010
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | errors: (none)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 23:44:44] 2026-03-14 22:44:11,827 | INFO     | pilot state: finished 
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | transexitcode: 0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | exeerrorcode: 0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | exeerrordiag: 
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | exitcode: 0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | exitmsg: OK
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | cpuconsumptiontime: 18858 s
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | nevents: 400
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | neventsw: 0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | pid: 25473
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | pgrp: 25473
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | corecount: 8
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | event service: False
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | sizes: {0: 2279707, 1: 2280335, 11: 2280335, 4406: 2315482, 4407: 2315482, 4408: 2315676}
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | --------------------------------------------------
[2026-03-14 23:44:44] 2026-03-14 22:44:11,828 | INFO     | 
[2026-03-14 23:44:44] 2026-03-14 22:44:11,829 | INFO     | executing command: ls -lF /tmp/job_11310398/atlas/pilot/slots/0
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 23:44:44] 2026-03-14 22:44:11,838 | INFO     | job 7045292571 has completed (purged errors)
[2026-03-14 23:44:44] 2026-03-14 22:44:11,839 | INFO     | overall cleanup function is called
[2026-03-14 23:44:44] 2026-03-14 22:44:12,844 | INFO     | --- collectZombieJob: --- 10, [25473]
[2026-03-14 23:44:44] 2026-03-14 22:44:12,845 | INFO     | zombie collector waiting for pid 25473
[2026-03-14 23:44:44] 2026-03-14 22:44:12,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 23:44:44] 2026-03-14 22:44:12,845 | INFO     | collected zombie processes
[2026-03-14 23:44:44] 2026-03-14 22:44:12,845 | INFO     | will attempt to kill all subprocesses of pid=25473
[2026-03-14 23:44:44] 2026-03-14 22:44:12,956 | INFO     | process IDs to be killed: [25473] (in reverse order)
[2026-03-14 23:44:44] 2026-03-14 22:44:12,995 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 23:44:44] 2026-03-14 22:44:12,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 23:44:44] 2026-03-14 22:44:13,001 | INFO     | did not find any defunct processes belonging to 25473
[2026-03-14 23:44:44] 2026-03-14 22:44:13,004 | INFO     | did not find any defunct processes belonging to 25473
[2026-03-14 23:44:44] 2026-03-14 22:44:13,005 | INFO     | ready for new job
[2026-03-14 23:44:44] 2026-03-14 22:44:13,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 23:44:44] 2026-03-14 22:44:13,005 | INFO     | **************************************
[2026-03-14 23:44:44] 2026-03-14 22:44:13,005 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 23:44:44] 2026-03-14 22:44:13,005 | INFO     | **************************************
[2026-03-14 23:44:44] 2026-03-14 22:44:13,005 | INFO     | 
[2026-03-14 23:44:44] 2026-03-14 22:44:13,019 | INFO     | architecture information:
[2026-03-14 23:44:44] 2026-03-14 22:44:13,019 | INFO     | executing command: cat /etc/os-release
[2026-03-14 23:44:44] 2026-03-14 22:44:13,024 | INFO     | cat /etc/os-release:
[2026-03-14 23:44:44] NAME="CentOS Linux"
[2026-03-14 23:44:44] VERSION="7 (Core)"
[2026-03-14 23:44:44] ID="centos"
[2026-03-14 23:44:44] ID_LIKE="rhel fedora"
[2026-03-14 23:44:44] VERSION_ID="7"
[2026-03-14 23:44:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 23:44:44] ANSI_COLOR="0;31"
[2026-03-14 23:44:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 23:44:44] HOME_URL="https://www.centos.org/"
[2026-03-14 23:44:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 23:44:44] 
[2026-03-14 23:44:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 23:44:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 23:44:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 23:44:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 23:44:44] 
[2026-03-14 23:44:44] 2026-03-14 22:44:13,024 | INFO     | **************************************
[2026-03-14 23:44:44] 2026-03-14 22:44:13,527 | INFO     | executing command: df -mP /tmp/job_11310398/atlas/pilot/slots/0
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | INFO     | sufficient remaining disk space (220414869504 B)
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | INFO     | update_server=False
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:44:44] 2026-03-14 22:44:13,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:44:44] 2026-03-14 22:44:13,534 | INFO     | aborting loop
[2026-03-14 23:44:44] 2026-03-14 22:44:14,105 | INFO     | all data control threads have been joined
[2026-03-14 23:44:44] 2026-03-14 22:44:14,204 | INFO     | all job control threads have been joined
[2026-03-14 23:44:44] 2026-03-14 22:44:14,538 | INFO     | [job] retrieve thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:14,539 | INFO     | [job] queue monitor thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:14,539 | INFO     | [job] job monitor thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:14,606 | INFO     | all payload control threads have been joined
[2026-03-14 23:44:44] 2026-03-14 22:44:14,701 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:14,758 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:14,840 | INFO     | [data] copytool_in thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:14,994 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,044 | INFO     | [payload] validate_post thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,110 | INFO     | [data] control thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,209 | INFO     | [job] control thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,320 | INFO     | [payload] failed_post thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,539 | INFO     | [data] copytool_out thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,612 | INFO     | [payload] control thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:15,886 | INFO     | [job] validate thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:16,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 23:44:44] 2026-03-14 22:44:20,619 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:23,890 | INFO     | job.realtimelogging is not enabled
[2026-03-14 23:44:44] 2026-03-14 22:44:24,895 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 23:44:44] 2026-03-14 22:44:38,863 | INFO     | [monitor] cgroup control has ended
[2026-03-14 23:44:44] 2026-03-14 22:44:39,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-14 23:44:44] 2026-03-14 22:44:43,657 | INFO     | PID=27526 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 23:44:44] 2026-03-14 22:44:43,657 | INFO     | .. there are 5 such processes running
[2026-03-14 23:44:44] 2026-03-14 22:44:43,658 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 23:44:44] 2026-03-14 22:44:43,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 23:44:44] 2026-03-14 22:44:43,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 23:44:44] 2026-03-14 22:44:43,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 23:44:44] 2026-03-14 22:44:43,658 | INFO     | [monitor] control thread has ended
[2026-03-14 23:44:44] 2026-03-14 22:44:44,065 | INFO     | all workflow threads have been joined
[2026-03-14 23:44:44] 2026-03-14 22:44:44,065 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 23:44:44] 2026-03-14 22:44:44,065 | INFO     | traces error code: 0
[2026-03-14 23:44:44] 2026-03-14 22:44:44,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 23:44:44] 2026-03-14 22:44:44,119 [wrapper] ==== pilot stdout END ====
[2026-03-14 23:44:44] 2026-03-14 22:44:44,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 23:44:44] 2026-03-14 22:44:44,122 [wrapper] pilotpid: 27526
[2026-03-14 23:44:44] 2026-03-14 22:44:44,123 [wrapper] Pilot exit status: 0
[2026-03-14 23:44:44] 2026-03-14 22:44:44,127 [wrapper] pandaids: 7045292571
[2026-03-14 23:44:44] 2026-03-14 22:44:44,151 [wrapper] cleanup supervisor_pilot  7535 27528
[2026-03-14 23:44:44] 2026-03-14 22:44:44,152 [wrapper] Test setup, not cleaning
[2026-03-14 23:44:44] 2026-03-14 22:44:44,153 [wrapper] apfmon messages muted
[2026-03-14 23:44:44] 2026-03-14 22:44:44,155 [wrapper] ==== wrapper stdout END ====
[2026-03-14 23:44:44] 2026-03-14 22:44:44,156 [wrapper] ==== wrapper stderr END ====
[2026-03-14 23:44:44]  *** Error codes and diagnostics ***
[2026-03-14 23:44:44]     "exeErrorCode": 0,
[2026-03-14 23:44:44]     "exeErrorDiag": "",
[2026-03-14 23:44:44]     "pilotErrorCode": 0,
[2026-03-14 23:44:44]     "pilotErrorDiag": "",
[2026-03-14 23:44:44]  *** Listing of results directory ***
[2026-03-14 23:44:44] total 614708
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user    585013 Mar 14 00:38 pilot3.tar.gz
[2026-03-14 23:44:44] -rwx------ 1 mf493845 unix-user     36322 Mar 14 00:41 runpilot2-wrapper.sh
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      5111 Mar 14 00:44 queuedata.json
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user       100 Mar 14 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 23:44:44] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 14 20:36 run_atlas
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user       105 Mar 14 20:36 job.xml
[2026-03-14 23:44:44] -rw-r--r-- 2 mf493845 unix-user 439314667 Mar 14 22:28 EVNT.46701403._001715.pool.root.1
[2026-03-14 23:44:44] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 14 22:28 start_atlas.sh
[2026-03-14 23:44:44] drwxrwx--x 2 mf493845 unix-user       100 Mar 14 22:28 shared
[2026-03-14 23:44:44] -rw-r--r-- 2 mf493845 unix-user    597525 Mar 14 22:28 input.tar.gz
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      6391 Mar 14 22:28 init_data.xml
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user         0 Mar 14 22:28 boinc_setup_complete
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      8192 Mar 14 22:28 boinc_mmap_file
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user         0 Mar 14 22:28 boinc_lockfile
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      2564 Mar 14 22:28 pandaJob.out
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user   1006481 Mar 14 22:30 agis_schedconf.cvmfs.json
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user   1511579 Mar 14 22:30 agis_ddmendpoints.agis.ALL.json
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user       415 Mar 14 22:30 workernode_map.json
[2026-03-14 23:44:44] drwx------ 5 mf493845 unix-user       440 Mar 14 22:30 pilot3
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user 184225262 Mar 14 23:43 HITS.48955010._036015.pool.root.1
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      1014 Mar 14 23:44 memory_monitor_summary.json
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user    336449 Mar 14 23:44 log.48955010._036015.job.log.tgz.1
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      6323 Mar 14 23:44 heartbeat.json
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user        95 Mar 14 23:44 pilot_heartbeat.json
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      4903 Mar 14 23:44 pilotlog.txt
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user    671460 Mar 14 23:44 log.48955010._036015.job.log.1
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user       357 Mar 14 23:44 output.list
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user       620 Mar 14 23:44 runtime_log
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user   1024000 Mar 14 23:44 result.tar.gz
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user      9219 Mar 14 23:44 runtime_log.err
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user       643 Mar 14 23:44 BgALDmOJRL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkLrLDmGo2rqn.diag
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user     21499 Mar 14 23:44 stderr.txt
[2026-03-14 23:44:44] HITS file was successfully produced:
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user 184225262 Mar 14 23:43 shared/HITS.pool.root.1
[2026-03-14 23:44:44]  *** Contents of shared directory: ***
[2026-03-14 23:44:44] total 610528
[2026-03-14 23:44:44] -rw-r--r-- 2 mf493845 unix-user 439314667 Mar 14 22:28 ATLAS.root_0
[2026-03-14 23:44:44] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 14 22:28 start_atlas.sh
[2026-03-14 23:44:44] -rw-r--r-- 2 mf493845 unix-user    597525 Mar 14 22:28 input.tar.gz
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user 184225262 Mar 14 23:43 HITS.pool.root.1
[2026-03-14 23:44:44] -rw------- 1 mf493845 unix-user   1024000 Mar 14 23:44 result.tar.gz
23:44:45 (31924): run_atlas exited; CPU time 18924.234401
23:44:45 (31924): called boinc_finish(0)

</stderr_txt>
]]>

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