Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:54:07 (8138): wrapper (7.7.26015): starting
01:54:07 (8138): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 01:54:07] Arguments: --nthreads 8
[2026-03-15 01:54:07] Threads: 8
[2026-03-15 01:54:07] Checking for CVMFS
[2026-03-15 01:54:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 01:54:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 01:54:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 01:54:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 01:54:09] 2.11.2.0 10131 128322 138236 157296 3 286 22709794 25165824 4674 130560 152 38799437 99.812 27871297 1010 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 01:54:09] CVMFS is ok
[2026-03-15 01:54:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 01:54:09] Checking for apptainer binary...
[2026-03-15 01:54:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 01:54:09] Running /usr/bin/apptainer --version
[2026-03-15 01:54:09] apptainer version 1.3.2-1.el7
[2026-03-15 01:54:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 01:54:21] cg-vwn460.simple-grid.lan
[2026-03-15 01:54:21] apptainer works
[2026-03-15 01:54:21] Set ATHENA_PROC_NUMBER=8
[2026-03-15 01:54:21] Set ATHENA_CORE_NUMBER=8
[2026-03-15 01:54:21] Starting ATLAS job with PandaID=7046914237
[2026-03-15 01:54:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 05:44:39]  *** The last 200 lines of the pilot log: ***
[2026-03-15 05:44:39] 2026-03-15 04:43:38,735 | INFO     | time since job start (13469s) is within the limit (345600.0s)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,421 | INFO     | job 7046914237 has state=finished
[2026-03-15 05:44:39] 2026-03-15 04:43:39,421 | INFO     | preparing for final server update for job 7046914237 in state='finished'
[2026-03-15 05:44:39] 2026-03-15 04:43:39,421 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-7046914237/jobReport.json
[2026-03-15 05:44:39] 2026-03-15 04:43:39,424 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-03-15 05:44:39] 2026-03-15 04:43:39,424 | INFO     | this job has now completed (state=finished)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,424 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,424 | INFO     | log transfer has been attempted: DONE
[2026-03-15 05:44:39] 2026-03-15 04:43:39,424 | INFO     | job 7046914237 has finished - writing final server update
[2026-03-15 05:44:39] 2026-03-15 04:43:39,425 | INFO     | total number of processed events: 400 (read)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,427 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7046914237/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,427 | INFO     | extracted standard info from prmon json
[2026-03-15 05:44:39] 2026-03-15 04:43:39,428 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 05:44:39] 2026-03-15 04:43:39,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 05:44:39] 2026-03-15 04:43:39,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 05:44:39] 2026-03-15 04:43:39,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 05:44:39] 2026-03-15 04:43:39,433 | INFO     | fitting pss+swap vs Time
[2026-03-15 05:44:39] 2026-03-15 04:43:39,433 | INFO     | sum of square deviations: 3168461268.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,435 | INFO     | sum of deviations: 56893340553.99999
[2026-03-15 05:44:39] 2026-03-15 04:43:39,435 | INFO     | mean x: 1773543178.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,435 | INFO     | mean y: 2440802.714285714
[2026-03-15 05:44:39] 2026-03-15 04:43:39,435 | INFO     | intersect: -31843552402.962303
[2026-03-15 05:44:39] 2026-03-15 04:43:39,436 | INFO     | chi2: 4.000965497143425
[2026-03-15 05:44:39] 2026-03-15 04:43:39,436 | INFO     | sum of square deviations: 2954447953.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,438 | INFO     | sum of deviations: 69686664374.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,438 | INFO     | mean x: 1773543025.5
[2026-03-15 05:44:39] 2026-03-15 04:43:39,438 | INFO     | mean y: 2449728.433962264
[2026-03-15 05:44:39] 2026-03-15 04:43:39,438 | INFO     | intersect: -41830169947.72894
[2026-03-15 05:44:39] 2026-03-15 04:43:39,439 | INFO     | chi2: 3.252105960769911
[2026-03-15 05:44:39] 2026-03-15 04:43:39,439 | INFO     | current chi2=3.252105960769911 (change=18.71697061392252 %)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,439 | INFO     | right removable region: 211
[2026-03-15 05:44:39] 2026-03-15 04:43:39,439 | INFO     | sum of square deviations: 2954447953.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,441 | INFO     | sum of deviations: -1817333441.5000057
[2026-03-15 05:44:39] 2026-03-15 04:43:39,441 | INFO     | mean x: 1773543330.5
[2026-03-15 05:44:39] 2026-03-15 04:43:39,441 | INFO     | mean y: 2482440.9103773586
[2026-03-15 05:44:39] 2026-03-15 04:43:39,444 | INFO     | intersect: 1093420462.4091594
[2026-03-15 05:44:39] 2026-03-15 04:43:39,445 | INFO     | chi2: 0.8234664301493485
[2026-03-15 05:44:39] 2026-03-15 04:43:39,445 | INFO     | current chi2=0.8234664301493485 (change=79.41830713768265 %)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,446 | INFO     | sum of square deviations: 2750295288.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,447 | INFO     | sum of deviations: -4305832620.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,447 | INFO     | mean x: 1773543483.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,448 | INFO     | mean y: 2484248.9516908214
[2026-03-15 05:44:39] 2026-03-15 04:43:39,448 | INFO     | intersect: 2779124784.7550645
[2026-03-15 05:44:39] 2026-03-15 04:43:39,448 | INFO     | chi2: 0.7966141955539225
[2026-03-15 05:44:39] 2026-03-15 04:43:39,448 | INFO     | current chi2=0.7966141955539225 (change=3.2608778709480464 %)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,448 | INFO     | left removable region: 20
[2026-03-15 05:44:39] 2026-03-15 04:43:39,449 | INFO     | sum of square deviations: 2160561440.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,450 | INFO     | sum of deviations: 5252364496.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,450 | INFO     | mean x: 1773543605.0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,450 | INFO     | mean y: 2498010.8376963353
[2026-03-15 05:44:39] 2026-03-15 04:43:39,451 | INFO     | intersect: -4309019028.46013
[2026-03-15 05:44:39] 2026-03-15 04:43:39,451 | INFO     | chi2: 0.0017606901837220457
[2026-03-15 05:44:39] 2026-03-15 04:43:39,451 | INFO     | current memory leak: 2.43 B/s (using 191 data points, chi2=0.00)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,452 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,452 | INFO     | ..............................
[2026-03-15 05:44:39] 2026-03-15 04:43:39,452 | INFO     | . Timing measurements:
[2026-03-15 05:44:39] 2026-03-15 04:43:39,452 | INFO     | . get job = 0 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,452 | INFO     | . initial setup = 89 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,453 | INFO     | . payload setup = 113 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,453 | INFO     | . stage-in = 0 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,453 | INFO     | . payload execution = 13330 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,453 | INFO     | . stage-out = 4 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,453 | INFO     | . log creation = 1 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,453 | INFO     | ..............................
[2026-03-15 05:44:39] 2026-03-15 04:43:39,567 | INFO     | 
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | job summary report
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | --------------------------------------------------
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | PanDA job id: 7046914237
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | task id: 48955010
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | errors: (none)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | pilot state: finished 
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | transexitcode: 0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | exeerrorcode: 0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,568 | INFO     | exeerrordiag: 
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | exitcode: 0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | exitmsg: OK
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | cpuconsumptiontime: 51522 s
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | nevents: 400
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | neventsw: 0
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | pid: 16479
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | pgrp: 16479
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | corecount: 8
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | event service: False
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | sizes: {0: 2279692, 1: 2280149, 2: 2280209, 12: 2280237, 13447: 2310500, 13448: 2310499, 13452: 2319681, 13456: 2319737, 13458: 2319931}
[2026-03-15 05:44:39] 2026-03-15 04:43:39,569 | INFO     | --------------------------------------------------
[2026-03-15 05:44:39] 2026-03-15 04:43:39,570 | INFO     | 
[2026-03-15 05:44:39] 2026-03-15 04:43:39,570 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-15 05:44:39] 2026-03-15 04:43:39,947 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,950 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,950 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 05:44:39] 2026-03-15 04:43:39,950 | INFO     | job 7046914237 has completed (purged errors)
[2026-03-15 05:44:39] 2026-03-15 04:43:39,950 | INFO     | overall cleanup function is called
[2026-03-15 05:44:39] 2026-03-15 04:43:40,959 | INFO     | --- collectZombieJob: --- 10, [16479]
[2026-03-15 05:44:39] 2026-03-15 04:43:40,959 | INFO     | zombie collector waiting for pid 16479
[2026-03-15 05:44:39] 2026-03-15 04:43:40,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 05:44:39] 2026-03-15 04:43:40,959 | INFO     | collected zombie processes
[2026-03-15 05:44:39] 2026-03-15 04:43:40,959 | INFO     | will attempt to kill all subprocesses of pid=16479
[2026-03-15 05:44:39] 2026-03-15 04:43:41,074 | INFO     | process IDs to be killed: [16479] (in reverse order)
[2026-03-15 05:44:39] 2026-03-15 04:43:41,820 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 05:44:39] 2026-03-15 04:43:41,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 05:44:39] 2026-03-15 04:43:41,823 | INFO     | did not find any defunct processes belonging to 16479
[2026-03-15 05:44:39] 2026-03-15 04:43:41,826 | INFO     | did not find any defunct processes belonging to 16479
[2026-03-15 05:44:39] 2026-03-15 04:43:41,826 | INFO     | ready for new job
[2026-03-15 05:44:39] 2026-03-15 04:43:41,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 05:44:39] 2026-03-15 04:43:41,828 | INFO     | **************************************
[2026-03-15 05:44:39] 2026-03-15 04:43:41,828 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 05:44:39] 2026-03-15 04:43:41,828 | INFO     | **************************************
[2026-03-15 05:44:39] 2026-03-15 04:43:41,828 | INFO     | 
[2026-03-15 05:44:39] 2026-03-15 04:43:41,829 | INFO     | pilot is running in a VM
[2026-03-15 05:44:39] 2026-03-15 04:43:41,829 | INFO     | architecture information:
[2026-03-15 05:44:39] 2026-03-15 04:43:41,836 | INFO     | executing command: cat /etc/os-release
[2026-03-15 05:44:39] 2026-03-15 04:43:42,058 | INFO     | cat /etc/os-release:
[2026-03-15 05:44:39] NAME="CentOS Linux"
[2026-03-15 05:44:39] VERSION="7 (Core)"
[2026-03-15 05:44:39] ID="centos"
[2026-03-15 05:44:39] ID_LIKE="rhel fedora"
[2026-03-15 05:44:39] VERSION_ID="7"
[2026-03-15 05:44:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 05:44:39] ANSI_COLOR="0;31"
[2026-03-15 05:44:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 05:44:39] HOME_URL="https://www.centos.org/"
[2026-03-15 05:44:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 05:44:39] 
[2026-03-15 05:44:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 05:44:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 05:44:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 05:44:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 05:44:39] 
[2026-03-15 05:44:39] 2026-03-15 04:43:42,059 | INFO     | **************************************
[2026-03-15 05:44:39] 2026-03-15 04:43:42,562 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-15 05:44:39] 2026-03-15 04:43:42,712 | INFO     | sufficient remaining disk space (494669922304 B)
[2026-03-15 05:44:39] 2026-03-15 04:43:42,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 05:44:39] 2026-03-15 04:43:42,713 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 05:44:39] 2026-03-15 04:43:42,713 | INFO     | update_server=False
[2026-03-15 05:44:39] 2026-03-15 04:43:42,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 05:44:39] 2026-03-15 04:43:42,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 05:44:39] 2026-03-15 04:43:43,069 | INFO     | all job control threads have been joined
[2026-03-15 05:44:39] 2026-03-15 04:43:43,300 | INFO     | all payload control threads have been joined
[2026-03-15 05:44:39] 2026-03-15 04:43:43,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 05:44:39] 2026-03-15 04:43:43,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 05:44:39] 2026-03-15 04:43:43,718 | INFO     | aborting loop
[2026-03-15 05:44:39] 2026-03-15 04:43:43,720 | INFO     | [job] retrieve thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:43,754 | INFO     | all data control threads have been joined
[2026-03-15 05:44:39] 2026-03-15 04:43:43,860 | INFO     | [job] validate thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,075 | INFO     | [job] control thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,102 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,129 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,133 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,307 | INFO     | [payload] control thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,486 | INFO     | [payload] failed_post thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 05:44:39] 2026-03-15 04:43:44,721 | INFO     | [data] copytool_out thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,724 | INFO     | [job] job monitor thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,760 | INFO     | [data] control thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,806 | INFO     | [payload] validate_post thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:44,898 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:45,069 | INFO     | [data] copytool_in thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:45,588 | INFO     | [job] queue monitor thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:43:47,382 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 05:44:39] 2026-03-15 04:44:11,927 | INFO     | PID=11980 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 05:44:39] 2026-03-15 04:44:11,927 | INFO     | .. there are 9 such processes running
[2026-03-15 05:44:39] 2026-03-15 04:44:11,928 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 05:44:39] 2026-03-15 04:44:11,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 05:44:39] 2026-03-15 04:44:11,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 05:44:39] 2026-03-15 04:44:31,965 | INFO     | [monitor] cgroup control has ended
[2026-03-15 05:44:39] 2026-03-15 04:44:33,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529924192064)>', '<ExcThread(monitor, started 140529090152192)>']
[2026-03-15 05:44:39] 2026-03-15 04:44:34,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 05:44:39] 2026-03-15 04:44:34,056 | INFO     | [monitor] control thread has ended
[2026-03-15 05:44:39] 2026-03-15 04:44:38,481 | INFO     | all workflow threads have been joined
[2026-03-15 05:44:39] 2026-03-15 04:44:38,481 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 05:44:39] 2026-03-15 04:44:38,481 | INFO     | traces error code: 0
[2026-03-15 05:44:39] 2026-03-15 04:44:38,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 05:44:39] 2026-03-15 04:44:38,657 [wrapper] ==== pilot stdout END ====
[2026-03-15 05:44:39] 2026-03-15 04:44:38,662 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 05:44:39] 2026-03-15 04:44:38,678 [wrapper] pilotpid: 11980
[2026-03-15 05:44:39] 2026-03-15 04:44:38,747 [wrapper] Pilot exit status: 0
[2026-03-15 05:44:39] 2026-03-15 04:44:38,889 [wrapper] pandaids: 7046914237
[2026-03-15 05:44:39] 2026-03-15 04:44:38,952 [wrapper] cleanup supervisor_pilot  7116 11981
[2026-03-15 05:44:39] 2026-03-15 04:44:38,972 [wrapper] Test setup, not cleaning
[2026-03-15 05:44:39] 2026-03-15 04:44:38,987 [wrapper] apfmon messages muted
[2026-03-15 05:44:39] 2026-03-15 04:44:38,997 [wrapper] ==== wrapper stdout END ====
[2026-03-15 05:44:39] 2026-03-15 04:44:39,004 [wrapper] ==== wrapper stderr END ====
[2026-03-15 05:44:39]  *** Error codes and diagnostics ***
[2026-03-15 05:44:39]     "exeErrorCode": 0,
[2026-03-15 05:44:39]     "exeErrorDiag": "",
[2026-03-15 05:44:39]     "pilotErrorCode": 0,
[2026-03-15 05:44:39]     "pilotErrorDiag": "",
[2026-03-15 05:44:39]  *** Listing of results directory ***
[2026-03-15 05:44:39] total 625084
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 14:10 pilot3.tar.gz
[2026-03-15 05:44:39] -rwx------. 1 boinc boinc     36322 Mar 14 14:10 runpilot2-wrapper.sh
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 14:12 queuedata.json
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc       100 Mar 15 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 05:44:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 01:54 run_atlas
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc       105 Mar 15 01:54 job.xml
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc      6391 Mar 15 01:54 init_data.xml
[2026-03-15 05:44:39] -rw-r--r--. 2 boinc boinc 443879453 Mar 15 01:54 EVNT.46701403._001903.pool.root.1
[2026-03-15 05:44:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 01:54 start_atlas.sh
[2026-03-15 05:44:39] drwxrwx--x. 2 boinc boinc        68 Mar 15 01:54 shared
[2026-03-15 05:44:39] -rw-r--r--. 2 boinc boinc    597529 Mar 15 01:54 input.tar.gz
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc         0 Mar 15 01:54 boinc_lockfile
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc      2564 Mar 15 01:54 pandaJob.out
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc       413 Mar 15 01:59 workernode_map.json
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc   1006481 Mar 15 01:59 agis_schedconf.cvmfs.json
[2026-03-15 05:44:39] drwx------. 5 boinc boinc      4096 Mar 15 01:59 pilot3
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc 187561407 Mar 15 05:42 HITS.48955010._044105.pool.root.1
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc       531 Mar 15 05:42 boinc_task_state.xml
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc      1016 Mar 15 05:43 memory_monitor_summary.json
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc   1511579 Mar 15 05:43 agis_ddmendpoints.agis.ALL.json
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc    472145 Mar 15 05:43 log.48955010._044105.job.log.tgz.1
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc        95 Mar 15 05:43 pilot_heartbeat.json
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc      6320 Mar 15 05:43 heartbeat.json
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc      8192 Mar 15 05:44 boinc_mmap_file
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc        28 Mar 15 05:44 wrapper_checkpoint.txt
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc      4880 Mar 15 05:44 pilotlog.txt
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc   1889089 Mar 15 05:44 log.48955010._044105.job.log.1
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc       357 Mar 15 05:44 output.list
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc       620 Mar 15 05:44 runtime_log
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc   2375680 Mar 15 05:44 result.tar.gz
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc       655 Mar 15 05:44 WOlKDmlwdL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOMqLDmfNguan.diag
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc      8816 Mar 15 05:44 runtime_log.err
[2026-03-15 05:44:39] -rw-r--r--. 1 boinc boinc     20932 Mar 15 05:44 stderr.txt
[2026-03-15 05:44:39] HITS file was successfully produced:
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc 187561407 Mar 15 05:42 shared/HITS.pool.root.1
[2026-03-15 05:44:39]  *** Contents of shared directory: ***
[2026-03-15 05:44:39] total 619568
[2026-03-15 05:44:39] -rw-r--r--. 2 boinc boinc 443879453 Mar 15 01:54 ATLAS.root_0
[2026-03-15 05:44:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 01:54 start_atlas.sh
[2026-03-15 05:44:39] -rw-r--r--. 2 boinc boinc    597529 Mar 15 01:54 input.tar.gz
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc 187561407 Mar 15 05:42 HITS.pool.root.1
[2026-03-15 05:44:39] -rw-------. 1 boinc boinc   2375680 Mar 15 05:44 result.tar.gz
05:44:41 (8138): run_atlas exited; CPU time 51720.538223
05:44:41 (8138): called boinc_finish(0)

</stderr_txt>
]]>

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