Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:38 (27550): wrapper (7.7.26015): starting
02:46:38 (27550): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 02:46:38] Arguments: --nthreads 8
[2026-03-15 02:46:38] Threads: 8
[2026-03-15 02:46:38] Checking for CVMFS
[2026-03-15 02:46:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 02:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 02:46:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 02:46:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 02:46:43] 2.11.2.0 28598 128372 135788 157297 2 53 21564035 25165825 4834 130560 161 42251477 99.839 26668814 900 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 02:46:43] CVMFS is ok
[2026-03-15 02:46:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 02:46:43] Checking for apptainer binary...
[2026-03-15 02:46:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 02:46:43] Running /usr/bin/apptainer --version
[2026-03-15 02:46:43] apptainer version 1.3.2-1.el7
[2026-03-15 02:46:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 02:46:48] cg-vwn446.simple-grid.lan
[2026-03-15 02:46:48] apptainer works
[2026-03-15 02:46:48] Set ATHENA_PROC_NUMBER=8
[2026-03-15 02:46:48] Set ATHENA_CORE_NUMBER=8
[2026-03-15 02:46:48] Starting ATLAS job with PandaID=7046914164
[2026-03-15 02:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:36:36]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:36:36] 2026-03-15 05:35:34,156 | INFO     | job 7046914164 has finished - writing final server update
[2026-03-15 06:36:36] 2026-03-15 05:35:34,156 | INFO     | total number of processed events: 400 (read)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,158 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7046914164/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,159 | INFO     | extracted standard info from prmon json
[2026-03-15 06:36:36] 2026-03-15 05:35:34,159 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 06:36:36] 2026-03-15 05:35:34,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 06:36:36] 2026-03-15 05:35:34,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 06:36:36] 2026-03-15 05:35:34,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 06:36:36] 2026-03-15 05:35:34,164 | INFO     | fitting pss+swap vs Time
[2026-03-15 06:36:36] 2026-03-15 05:35:34,164 | INFO     | sum of square deviations: 3124858590.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,166 | INFO     | sum of deviations: 78535671952.00002
[2026-03-15 06:36:36] 2026-03-15 05:35:34,166 | INFO     | mean x: 1773546326.5
[2026-03-15 06:36:36] 2026-03-15 05:35:34,167 | INFO     | mean y: 2417426.3333333335
[2026-03-15 06:36:36] 2026-03-15 05:35:34,167 | INFO     | intersect: -44571328385.85035
[2026-03-15 06:36:36] 2026-03-15 05:35:34,167 | INFO     | chi2: 5.879388308419653
[2026-03-15 06:36:36] 2026-03-15 05:35:34,168 | INFO     | sum of square deviations: 2912836010.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,169 | INFO     | sum of deviations: 90648619096.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,169 | INFO     | mean x: 1773546174.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,170 | INFO     | mean y: 2425945.8767772513
[2026-03-15 06:36:36] 2026-03-15 05:35:34,170 | INFO     | intersect: -55191038782.023964
[2026-03-15 06:36:36] 2026-03-15 05:35:34,170 | INFO     | chi2: 5.153420398288374
[2026-03-15 06:36:36] 2026-03-15 05:35:34,170 | INFO     | current chi2=5.153420398288374 (change=12.347677548217847 %)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,170 | INFO     | right removable region: 210
[2026-03-15 06:36:36] 2026-03-15 05:35:34,171 | INFO     | sum of square deviations: 2912836010.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,172 | INFO     | sum of deviations: 7595467399.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,173 | INFO     | mean x: 1773546479.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,173 | INFO     | mean y: 2468388.72985782
[2026-03-15 06:36:36] 2026-03-15 05:35:34,173 | INFO     | intersect: -4622204753.04984
[2026-03-15 06:36:36] 2026-03-15 05:35:34,173 | INFO     | chi2: 1.5311983697906402
[2026-03-15 06:36:36] 2026-03-15 05:35:34,173 | INFO     | current chi2=1.5311983697906402 (change=73.95650211438036 %)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,174 | INFO     | sum of square deviations: 2710627567.5
[2026-03-15 06:36:36] 2026-03-15 05:35:34,176 | INFO     | sum of deviations: -15351057358.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,176 | INFO     | mean x: 1773546631.5
[2026-03-15 06:36:36] 2026-03-15 05:35:34,176 | INFO     | mean y: 2485520.5533980583
[2026-03-15 06:36:36] 2026-03-15 05:35:34,176 | INFO     | intersect: 10046586153.808022
[2026-03-15 06:36:36] 2026-03-15 05:35:34,177 | INFO     | chi2: 0.8572506344016588
[2026-03-15 06:36:36] 2026-03-15 05:35:34,177 | INFO     | current chi2=0.8572506344016588 (change=44.014397395232976 %)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,177 | INFO     | sum of square deviations: 2518000700.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,179 | INFO     | sum of deviations: -8335143638.999999
[2026-03-15 06:36:36] 2026-03-15 05:35:34,179 | INFO     | mean x: 1773546784.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,179 | INFO     | mean y: 2479958.9900497515
[2026-03-15 06:36:36] 2026-03-15 05:35:34,179 | INFO     | intersect: 5873315179.618267
[2026-03-15 06:36:36] 2026-03-15 05:35:34,179 | INFO     | chi2: 0.8202747374117532
[2026-03-15 06:36:36] 2026-03-15 05:35:34,180 | INFO     | current chi2=0.8202747374117532 (change=4.313312292351232 %)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,180 | INFO     | left removable region: 30
[2026-03-15 06:36:36] 2026-03-15 05:35:34,180 | INFO     | sum of square deviations: 1808350185.0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,181 | INFO     | sum of deviations: 5331603313.000001
[2026-03-15 06:36:36] 2026-03-15 05:35:34,182 | INFO     | mean x: 1773547058.5
[2026-03-15 06:36:36] 2026-03-15 05:35:34,182 | INFO     | mean y: 2490380.7444444443
[2026-03-15 06:36:36] 2026-03-15 05:35:34,182 | INFO     | intersect: -5226502018.678461
[2026-03-15 06:36:36] 2026-03-15 05:35:34,182 | INFO     | chi2: 0.00024901889629960625
[2026-03-15 06:36:36] 2026-03-15 05:35:34,182 | INFO     | current memory leak: 2.95 B/s (using 180 data points, chi2=0.00)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,183 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,183 | INFO     | ..............................
[2026-03-15 06:36:36] 2026-03-15 05:35:34,183 | INFO     | . Timing measurements:
[2026-03-15 06:36:36] 2026-03-15 05:35:34,183 | INFO     | . get job = 0 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | . initial setup = 104 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | . payload setup = 126 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | . stage-in = 0 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | . payload execution = 13259 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | . stage-out = 5 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | . log creation = 1 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,184 | INFO     | ..............................
[2026-03-15 06:36:36] 2026-03-15 05:35:34,321 | INFO     | 
[2026-03-15 06:36:36] 2026-03-15 05:35:34,321 | INFO     | job summary report
[2026-03-15 06:36:36] 2026-03-15 05:35:34,321 | INFO     | --------------------------------------------------
[2026-03-15 06:36:36] 2026-03-15 05:35:34,321 | INFO     | PanDA job id: 7046914164
[2026-03-15 06:36:36] 2026-03-15 05:35:34,321 | INFO     | task id: 48955010
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | errors: (none)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | pilot state: finished 
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | transexitcode: 0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | exeerrorcode: 0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | exeerrordiag: 
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | exitcode: 0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | exitmsg: OK
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | cpuconsumptiontime: 51169 s
[2026-03-15 06:36:36] 2026-03-15 05:35:34,322 | INFO     | nevents: 400
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | neventsw: 0
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | pid: 3868
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | pgrp: 3868
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | corecount: 8
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | event service: False
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | sizes: {0: 2279691, 1: 2279775, 2: 2280236, 12: 2280236, 13390: 2310392, 13396: 2319390, 13397: 2319574, 13400: 2319768}
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | --------------------------------------------------
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | 
[2026-03-15 06:36:36] 2026-03-15 05:35:34,323 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-15 06:36:36] 2026-03-15 05:35:34,732 | INFO     | time since job start (13412s) is within the limit (345600.0s)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,755 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,758 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 06:36:36] 2026-03-15 05:35:34,758 | INFO     | job 7046914164 has completed (purged errors)
[2026-03-15 06:36:36] 2026-03-15 05:35:34,758 | INFO     | overall cleanup function is called
[2026-03-15 06:36:36] 2026-03-15 05:35:35,765 | INFO     | --- collectZombieJob: --- 10, [3868]
[2026-03-15 06:36:36] 2026-03-15 05:35:35,766 | INFO     | zombie collector waiting for pid 3868
[2026-03-15 06:36:36] 2026-03-15 05:35:35,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 06:36:36] 2026-03-15 05:35:35,766 | INFO     | collected zombie processes
[2026-03-15 06:36:36] 2026-03-15 05:35:35,766 | INFO     | will attempt to kill all subprocesses of pid=3868
[2026-03-15 06:36:36] 2026-03-15 05:35:35,867 | INFO     | process IDs to be killed: [3868] (in reverse order)
[2026-03-15 06:36:36] 2026-03-15 05:35:36,579 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 06:36:36] 2026-03-15 05:35:36,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 06:36:36] 2026-03-15 05:35:36,583 | INFO     | did not find any defunct processes belonging to 3868
[2026-03-15 06:36:36] 2026-03-15 05:35:36,585 | INFO     | did not find any defunct processes belonging to 3868
[2026-03-15 06:36:36] 2026-03-15 05:35:36,585 | INFO     | ready for new job
[2026-03-15 06:36:36] 2026-03-15 05:35:36,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 06:36:36] 2026-03-15 05:35:36,588 | INFO     | **************************************
[2026-03-15 06:36:36] 2026-03-15 05:35:36,588 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 06:36:36] 2026-03-15 05:35:36,588 | INFO     | **************************************
[2026-03-15 06:36:36] 2026-03-15 05:35:36,588 | INFO     | 
[2026-03-15 06:36:36] 2026-03-15 05:35:36,589 | INFO     | pilot is running in a VM
[2026-03-15 06:36:36] 2026-03-15 05:35:36,589 | INFO     | architecture information:
[2026-03-15 06:36:36] 2026-03-15 05:35:36,592 | INFO     | executing command: cat /etc/os-release
[2026-03-15 06:36:36] 2026-03-15 05:35:36,785 | INFO     | cat /etc/os-release:
[2026-03-15 06:36:36] NAME="CentOS Linux"
[2026-03-15 06:36:36] VERSION="7 (Core)"
[2026-03-15 06:36:36] ID="centos"
[2026-03-15 06:36:36] ID_LIKE="rhel fedora"
[2026-03-15 06:36:36] VERSION_ID="7"
[2026-03-15 06:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 06:36:36] ANSI_COLOR="0;31"
[2026-03-15 06:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 06:36:36] HOME_URL="https://www.centos.org/"
[2026-03-15 06:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 06:36:36] 
[2026-03-15 06:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 06:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 06:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 06:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 06:36:36] 
[2026-03-15 06:36:36] 2026-03-15 05:35:36,785 | INFO     | **************************************
[2026-03-15 06:36:36] 2026-03-15 05:35:37,288 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-15 06:36:36] 2026-03-15 05:35:37,537 | INFO     | sufficient remaining disk space (494036582400 B)
[2026-03-15 06:36:36] 2026-03-15 05:35:37,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:36:36] 2026-03-15 05:35:37,538 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:36:36] 2026-03-15 05:35:37,538 | INFO     | update_server=False
[2026-03-15 06:36:36] 2026-03-15 05:35:37,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:36:36] 2026-03-15 05:35:37,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:36:36] 2026-03-15 05:35:37,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:36:36] 2026-03-15 05:35:37,547 | INFO     | aborting loop
[2026-03-15 06:36:36] 2026-03-15 05:35:37,699 | INFO     | all data control threads have been joined
[2026-03-15 06:36:36] 2026-03-15 05:35:37,741 | INFO     | all payload control threads have been joined
[2026-03-15 06:36:36] 2026-03-15 05:35:38,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:36:36] 2026-03-15 05:35:38,395 | INFO     | all job control threads have been joined
[2026-03-15 06:36:36] 2026-03-15 05:35:38,544 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:38,553 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:38,567 | INFO     | [job] validate thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:38,706 | INFO     | [data] control thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:38,748 | INFO     | [payload] control thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:38,846 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,005 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,117 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,164 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,332 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:36:36] 2026-03-15 05:35:39,402 | INFO     | [job] control thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,546 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:39,562 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:40,038 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:40,342 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:35:42,162 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:36:36] 2026-03-15 05:36:07,882 | INFO     | PID=31724 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 06:36:36] 2026-03-15 05:36:07,882 | INFO     | .. there are 9 such processes running
[2026-03-15 06:36:36] 2026-03-15 05:36:07,882 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:36:36] 2026-03-15 05:36:07,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:36:36] 2026-03-15 05:36:07,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:36:36] 2026-03-15 05:36:25,082 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:36:36] 2026-03-15 05:36:27,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875399894848)>', '<ExcThread(monitor, started 139875089094400)>']
[2026-03-15 06:36:36] 2026-03-15 05:36:27,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:36:36] 2026-03-15 05:36:28,000 | INFO     | [monitor] control thread has ended
[2026-03-15 06:36:36] 2026-03-15 05:36:32,027 | INFO     | all workflow threads have been joined
[2026-03-15 06:36:36] 2026-03-15 05:36:32,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:36:36] 2026-03-15 05:36:32,028 | INFO     | traces error code: 0
[2026-03-15 06:36:36] 2026-03-15 05:36:32,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:36:36] 2026-03-15 05:36:32,493 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:36:36] 2026-03-15 05:36:32,583 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:36:36] 2026-03-15 05:36:32,665 [wrapper] pilotpid: 31724
[2026-03-15 06:36:36] 2026-03-15 05:36:32,745 [wrapper] Pilot exit status: 0
[2026-03-15 06:36:36] 2026-03-15 05:36:33,015 [wrapper] pandaids: 7046914164
[2026-03-15 06:36:36] 2026-03-15 05:36:33,440 [wrapper] cleanup supervisor_pilot 11558 31725
[2026-03-15 06:36:36] 2026-03-15 05:36:33,494 [wrapper] Test setup, not cleaning
[2026-03-15 06:36:36] 2026-03-15 05:36:33,551 [wrapper] apfmon messages muted
[2026-03-15 06:36:36] 2026-03-15 05:36:33,666 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:36:36] 2026-03-15 05:36:33,769 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:36:36]  *** Error codes and diagnostics ***
[2026-03-15 06:36:36]     "exeErrorCode": 0,
[2026-03-15 06:36:36]     "exeErrorDiag": "",
[2026-03-15 06:36:36]     "pilotErrorCode": 0,
[2026-03-15 06:36:36]     "pilotErrorDiag": "",
[2026-03-15 06:36:36]  *** Listing of results directory ***
[2026-03-15 06:36:36] total 620500
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc    585013 Mar 14 14:10 pilot3.tar.gz
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc      5111 Mar 14 14:10 queuedata.json
[2026-03-15 06:36:36] -rwx------. 1 boinc boinc     36322 Mar 14 14:11 runpilot2-wrapper.sh
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc       100 Mar 15 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:36:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 02:46 run_atlas
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc       105 Mar 15 02:46 job.xml
[2026-03-15 06:36:36] -rw-r--r--. 2 boinc boinc 444447192 Mar 15 02:46 EVNT.46701403._001901.pool.root.1
[2026-03-15 06:36:36] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:46 start_atlas.sh
[2026-03-15 06:36:36] drwxrwx--x. 2 boinc boinc        68 Mar 15 02:46 shared
[2026-03-15 06:36:36] -rw-r--r--. 2 boinc boinc    597523 Mar 15 02:46 input.tar.gz
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc      6392 Mar 15 02:46 init_data.xml
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc         0 Mar 15 02:46 boinc_lockfile
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc      2564 Mar 15 02:46 pandaJob.out
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc       415 Mar 15 02:51 workernode_map.json
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc   1006481 Mar 15 02:52 agis_schedconf.cvmfs.json
[2026-03-15 06:36:36] drwx------. 5 boinc boinc      4096 Mar 15 02:52 pilot3
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc 182382905 Mar 15 06:34 HITS.48955010._044032.pool.root.1
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc       532 Mar 15 06:34 boinc_task_state.xml
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc      1013 Mar 15 06:35 memory_monitor_summary.json
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc   1511579 Mar 15 06:35 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc    443414 Mar 15 06:35 log.48955010._044032.job.log.tgz.1
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc        95 Mar 15 06:35 pilot_heartbeat.json
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc      6320 Mar 15 06:35 heartbeat.json
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc      8192 Mar 15 06:36 boinc_mmap_file
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc        28 Mar 15 06:36 wrapper_checkpoint.txt
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc      4880 Mar 15 06:36 pilotlog.txt
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc   1877822 Mar 15 06:36 log.48955010._044032.job.log.1
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc       357 Mar 15 06:36 output.list
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc       620 Mar 15 06:36 runtime_log
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc   2334720 Mar 15 06:36 result.tar.gz
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc       655 Mar 15 06:36 zwrNDmrwdL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmw4sLDmWlFS3m.diag
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc      8816 Mar 15 06:36 runtime_log.err
[2026-03-15 06:36:36] -rw-r--r--. 1 boinc boinc     20662 Mar 15 06:36 stderr.txt
[2026-03-15 06:36:36] HITS file was successfully produced:
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc 182382905 Mar 15 06:34 shared/HITS.pool.root.1
[2026-03-15 06:36:36]  *** Contents of shared directory: ***
[2026-03-15 06:36:36] total 615024
[2026-03-15 06:36:36] -rw-r--r--. 2 boinc boinc 444447192 Mar 15 02:46 ATLAS.root_0
[2026-03-15 06:36:36] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:46 start_atlas.sh
[2026-03-15 06:36:36] -rw-r--r--. 2 boinc boinc    597523 Mar 15 02:46 input.tar.gz
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc 182382905 Mar 15 06:34 HITS.pool.root.1
[2026-03-15 06:36:36] -rw-------. 1 boinc boinc   2334720 Mar 15 06:36 result.tar.gz
06:36:37 (27550): run_atlas exited; CPU time 51378.384326
06:36:37 (27550): called boinc_finish(0)

</stderr_txt>
]]>

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