Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-15 06:17:27 (5536): vboxwrapper version 26210
2026-03-15 06:17:27 (5536): BOINC client version: 8.2.8
2026-03-15 06:17:27 (5536): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-03-15 06:17:28 (5536): Successfully copied 'init_data.xml' to the shared directory.
2026-03-15 06:17:28 (5536): Create VM. (boinc_d90ac73fcf7dbf5a, slot#1)
2026-03-15 06:17:28 (5536): Setting Memory Size for VM. (4800MB)
2026-03-15 06:17:29 (5536): Setting CPU Count for VM. (8)
2026-03-15 06:17:29 (5536): Setting Chipset Options for VM.
2026-03-15 06:17:29 (5536): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-15 06:17:29 (5536): Setting Boot Options for VM.
2026-03-15 06:17:30 (5536): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-15 06:17:30 (5536): Enabling VM Network Access.
2026-03-15 06:17:30 (5536): Disabling USB Support for VM.
2026-03-15 06:17:31 (5536): Disabling COM Port Support for VM.
2026-03-15 06:17:31 (5536): Disabling LPT Port Support for VM.
2026-03-15 06:17:31 (5536): Disabling Audio Support for VM.
2026-03-15 06:17:31 (5536): Disabling Clipboard Support for VM.
2026-03-15 06:17:32 (5536): Disabling Drag and Drop Support for VM.
2026-03-15 06:17:32 (5536): Adding storage controller(s) to VM.
2026-03-15 06:17:32 (5536): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-15 06:17:33 (5536): Adding VirtualBox Guest Additions to VM.
2026-03-15 06:17:33 (5536): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-15 06:17:33 (5536): forwarding host port 60411 to guest port 80
2026-03-15 06:17:33 (5536): Enabling remote desktop for VM.
2026-03-15 06:17:34 (5536): Enabling shared directory for VM.
2026-03-15 06:17:35 (5536): Starting VM using VBoxManage interface. (boinc_d90ac73fcf7dbf5a, slot#1)
2026-03-15 06:17:40 (5536): Successfully started VM. (PID = '26516')
2026-03-15 06:17:40 (5536): Reporting VM Process ID to BOINC.
2026-03-15 06:17:40 (5536): Guest Log: BIOS: VirtualBox 7.1.4
2026-03-15 06:17:40 (5536): Guest Log: CPUID EDX: 0x178bfbff
2026-03-15 06:17:40 (5536): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-15 06:17:40 (5536): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-15 06:17:40 (5536): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-15 06:17:40 (5536): Detected: Web Application Enabled (http://localhost:60411)
2026-03-15 06:17:40 (5536): Detected: Remote Desktop Enabled (localhost:60415)
2026-03-15 06:17:40 (5536): Preference change detected
2026-03-15 06:17:40 (5536): Setting CPU throttle for VM. (100%)
2026-03-15 06:17:41 (5536): Setting network throttle for VM. (1024KB)
2026-03-15 06:17:41 (5536): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-15 06:17:42 (5536): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-15 06:17:42 (5536): Guest Log: BIOS: Booting from Hard Disk...
2026-03-15 06:17:45 (5536): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-15 06:17:45 (5536): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-15 06:17:45 (5536): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-15 06:17:50 (5536): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-15 06:17:50 (5536): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-15 06:17:55 (5536): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000197 main     Log opened 2026-03-15T06:17:53.547563000Z
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000336 main     OS Product: Linux
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000376 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000404 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000427 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000427 main     Process ID: 1378
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.000428 main     Package type: LINUX_64BITS_GENERIC
2026-03-15 06:17:55 (5536): Guest Log: 00:00:00.001175 main     5.2.32 r132073 started. Verbose level = 0
2026-03-15 06:17:56 (5536): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-15 06:17:56 (5536): Guest Log: [INFO] Mounting shared directory
2026-03-15 06:17:56 (5536): Guest Log: [INFO] Checking for init_data.xml
2026-03-15 06:18:01 (5536): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-15 06:18:01 (5536): Guest Log: [INFO] Detected branch: prod
2026-03-15 06:18:01 (5536): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-15 06:18:01 (5536): Guest Log: Copying input files
2026-03-15 06:18:03 (5536): Guest Log: Copied input files into RunAtlas.
2026-03-15 06:18:03 (5536): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2026-03-15 06:18:05 (5536): Guest Log: 00:00:10.024108 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 232 709 000ns (GuestNow=1 773 569 885 782 571 000 ns GuestLast=1 773 555 473 549 862 000 ns fSetTimeLastLoop=true )
2026-03-15 06:18:11 (5536): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-15 06:18:11 (5536): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-15 06:18:11 (5536): Guest Log: 2.6.3.0 1659 0 31636 157308 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2026-03-15 06:18:12 (5536): Guest Log: copied the webapp to /var/www
2026-03-15 06:18:12 (5536): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-15 06:18:12 (5536): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-15 06:18:12 (5536): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-15 06:18:12 (5536): Guest Log:  *** Starting ATLAS job. (PandaID=7047331662 taskID=48955010) ***
2026-03-15 07:21:07 (5536): Guest Log:  *** Job finished ***
2026-03-15 07:21:07 (5536): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:20:58,927 | INFO     | end of generic workflow (traces error code: 0)
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:20:58,927 | INFO     | traces error code: 0
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:20:58,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,750 | INFO     | PID=6088 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,751 | INFO     | found 0 job(s) in 20 queues
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,751 | CRITICAL | thread 'MainThread' is not alive
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,751 | INFO     | [monitor] control thread has ended
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,855 [wrapper] ==== pilot stdout END ====
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,861 [wrapper] ==== wrapper stdout RESUME ====
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,867 [wrapper] pilotpid: 6088
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,874 [wrapper] Pilot exit status: 0
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,910 [wrapper] pandaids: 7047331662
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,951 [wrapper] cleanup supervisor_pilot 16008 6089
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,964 [wrapper] Test setup, not cleaning
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,970 [wrapper] apfmon messages muted
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,976 [wrapper] ==== wrapper stdout END ====
2026-03-15 07:21:07 (5536): Guest Log: 2026-03-15 11:21:04,983 [wrapper] ==== wrapper stderr END ====
2026-03-15 07:21:07 (5536): Guest Log:  *** Error codes and diagnostics ***
2026-03-15 07:21:07 (5536): Guest Log:     "exeErrorCode": 0,
2026-03-15 07:21:07 (5536): Guest Log:     "exeErrorDiag": "",
2026-03-15 07:21:07 (5536): Guest Log:     "pilotErrorCode": 0,
2026-03-15 07:21:07 (5536): Guest Log:     "pilotErrorDiag": "",
2026-03-15 07:21:07 (5536): Guest Log:  *** Listing of results directory ***
2026-03-15 07:21:07 (5536): Guest Log: total 186980
2026-03-15 07:21:07 (5536): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 14 16:40 pilot3.tar.gz
2026-03-15 07:21:07 (5536): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 14 16:44 runpilot2-wrapper.sh
2026-03-15 07:21:07 (5536): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 14 16:48 queuedata.json
2026-03-15 07:21:07 (5536): Guest Log: -rwxr-xr-x. 1 atlas atlas    597531 Mar 15 10:18 input.tar.gz
2026-03-15 07:21:07 (5536): Guest Log: -rwxr-xr-x. 1 atlas atlas      9296 Mar 15 10:18 init_data.xml
2026-03-15 07:21:07 (5536): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 15 10:18 start_atlas.sh
2026-03-15 07:21:07 (5536): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 15 10:18 EVNT.46701403._001964.pool.root.1 -> /data/./ATLAS.root_0
2026-03-15 07:21:07 (5536): Guest Log: -rw-r--r--. 1 atlas atlas      2565 Mar 15 10:18 pandaJob.out
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas        48 Mar 15 10:18 setup.sh.local
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas   1006481 Mar 15 10:18 agis_schedconf.cvmfs.json
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 15 10:18 agis_ddmendpoints.agis.ALL.json
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas       425 Mar 15 10:18 workernode_map.json
2026-03-15 07:21:07 (5536): Guest Log: drwx------. 5 atlas atlas      4096 Mar 15 10:18 pilot3
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas 185809061 Mar 15 11:19 HITS.48955010._046978.pool.root.1
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas        95 Mar 15 11:20 pilot_heartbeat.json
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas      1037 Mar 15 11:20 memory_monitor_summary.json
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas    350210 Mar 15 11:20 log.48955010._046978.job.log.tgz.1
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas      6336 Mar 15 11:20 heartbeat.json
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas       814 Mar 15 11:21 pilotlog.txt
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas    545290 Mar 15 11:21 log.48955010._046978.job.log.1
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas       357 Mar 15 11:21 output.list
2026-03-15 07:21:07 (5536): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 15 11:21 runtime_log
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas    911360 Mar 15 11:21 result.tar.gz
2026-03-15 07:21:07 (5536): Guest Log: -rw-r--r--. 1 atlas atlas      9220 Mar 15 11:21 runtime_log.err
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas       655 Mar 15 11:21 GjoLDmXHhL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMjtLDmOxYwom.diag
2026-03-15 07:21:07 (5536): Guest Log: Looking for outputfile HITS.48955010._046978.pool.root.1
2026-03-15 07:21:07 (5536): Guest Log: HITS file was successfully produced
2026-03-15 07:21:07 (5536): Guest Log: -rw-------. 1 atlas atlas 185809061 Mar 15 11:19 /home/atlas/RunAtlas/HITS.48955010._046978.pool.root.1
2026-03-15 07:21:08 (5536): Guest Log: Successfully finished the ATLAS job!
2026-03-15 07:21:08 (5536): Guest Log: Copying the results back to the shared directory!
2026-03-15 07:21:08 (5536): Guest Log:  *** Contents of shared directory: ***
2026-03-15 07:21:08 (5536): Guest Log: total 611976
2026-03-15 07:21:08 (5536): Guest Log: -rwxrwxrwx. 1 root root 439310555 Mar 15 10:17 ATLAS.root_0
2026-03-15 07:21:08 (5536): Guest Log: -rwxrwxrwx. 1 root root 185809061 Mar 15  2026 HITS.pool.root.1
2026-03-15 07:21:08 (5536): Guest Log: -rwxrwxrwx. 1 root root      9296 Mar 15 10:17 init_data.xml
2026-03-15 07:21:08 (5536): Guest Log: -rwxrwxrwx. 1 root root    597531 Mar 14 20:26 input.tar.gz
2026-03-15 07:21:08 (5536): Guest Log: -rwxrwxrwx. 1 root root    911360 Mar 15  2026 result.tar.gz
2026-03-15 07:21:08 (5536): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 14 20:26 start_atlas.sh
2026-03-15 07:21:08 (5536): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-15 07:21:08 (5536): VM Completion File Detected.
2026-03-15 07:21:08 (5536): Powering off VM.
2026-03-15 07:21:09 (5536): Successfully stopped VM.
2026-03-15 07:21:09 (5536): Deregistering VM. (boinc_d90ac73fcf7dbf5a, slot#1)
2026-03-15 07:21:09 (5536): Removing network bandwidth throttle group from VM.
2026-03-15 07:21:09 (5536): Removing VM from VirtualBox.
2026-03-15 07:21:14 (5536): called boinc_finish(0)

</stderr_txt>
]]>

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