Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:53:59 (412724): wrapper (7.7.26015): starting
06:53:59 (412724): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 06:53:59] Arguments: --nthreads 4
[2026-03-15 06:53:59] Threads: 4
[2026-03-15 06:53:59] Checking for CVMFS
[2026-03-15 06:53:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 06:54:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 06:54:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 06:54:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 06:54:00] 2.9.2.0 79673 25300 106820 157303 1 50 30925395 36864000 0 130560 0 11902303 99.985 956389 10632 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 06:54:00] CVMFS is ok
[2026-03-15 06:54:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 06:54:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 06:54:00] Further information can be found at the LHC@home message board.
[2026-03-15 06:54:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 06:54:00] Checking for apptainer binary...
[2026-03-15 06:54:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 06:54:00] Running /usr/bin/apptainer --version
[2026-03-15 06:54:00] apptainer version 1.4.1-1.1
[2026-03-15 06:54:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 06:54:00] thA309
[2026-03-15 06:54:00] apptainer works
[2026-03-15 06:54:00] Set ATHENA_PROC_NUMBER=4
[2026-03-15 06:54:00] Set ATHENA_CORE_NUMBER=4
[2026-03-15 06:54:00] Starting ATLAS job with PandaID=7054978762
[2026-03-15 06:54:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 08:19:25]  *** The last 200 lines of the pilot log: ***
[2026-03-15 08:19:25] 2026-03-15 07:18:45,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 08:19:25] 2026-03-15 07:18:45,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 08:19:25] 2026-03-15 07:18:45,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:19:25] 2026-03-15 07:18:45,231 | INFO     | all payload control threads have been joined
[2026-03-15 08:19:25] 2026-03-15 07:18:45,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:19:25] 2026-03-15 07:18:45,240 | INFO     | aborting loop
[2026-03-15 08:19:25] 2026-03-15 07:18:45,539 | INFO     | all data control threads have been joined
[2026-03-15 08:19:25] 2026-03-15 07:18:46,036 | INFO     | [job] retrieve thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,036 | INFO     | [job] queue monitor thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,237 | INFO     | [payload] control thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,245 | INFO     | [job] job monitor thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,320 | INFO     | [payload] validate_post thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,526 | INFO     | all job control threads have been joined
[2026-03-15 08:19:25] 2026-03-15 07:18:46,545 | INFO     | [data] control thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,849 | INFO     | [job] validate thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:46,950 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:47,036 | INFO     | [data] copytool_out thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:47,047 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:47,086 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:47,193 | INFO     | [data] copytool_in thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:47,315 | INFO     | [payload] failed_post thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:47,532 | INFO     | [job] control thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:18:48,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 08:19:25] 2026-03-15 07:18:52,169 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 08:19:25] 2026-03-15 07:19:13,763 | INFO     | 5074s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-15 08:19:25] 2026-03-15 07:19:14,835 | INFO     | PID=416850 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 08:19:25] 2026-03-15 07:19:14,835 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 08:19:25] 2026-03-15 07:19:14,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 08:19:25] 2026-03-15 07:19:14,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 08:19:25] 2026-03-15 07:19:19,679 | INFO     | [monitor] cgroup control has ended
[2026-03-15 08:19:25] 2026-03-15 07:19:20,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017378096960)>', '<ExcThread(monitor, started 140016655259392)>']
[2026-03-15 08:19:25] 2026-03-15 07:19:20,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 08:19:25] 2026-03-15 07:19:20,863 | INFO     | [monitor] control thread has ended
[2026-03-15 08:19:25] 2026-03-15 07:19:25,340 | INFO     | all workflow threads have been joined
[2026-03-15 08:19:25] 2026-03-15 07:19:25,341 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 08:19:25] 2026-03-15 07:19:25,342 | INFO     | traces error code: 0
[2026-03-15 08:19:25] 2026-03-15 07:19:25,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 08:19:25] 2026-03-15 07:19:25,425 [wrapper] ==== pilot stdout END ====
[2026-03-15 08:19:25] 2026-03-15 07:19:25,429 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 08:19:25] 2026-03-15 07:19:25,433 [wrapper] pilotpid: 416850
[2026-03-15 08:19:25] 2026-03-15 07:19:25,437 [wrapper] Pilot exit status: 0
[2026-03-15 08:19:25] 2026-03-15 07:19:25,449 [wrapper] pandaids: 7054978762
[2026-03-15 08:19:25] 2026-03-15 07:19:25,473 [wrapper] cleanup supervisor_pilot  427312 416851
[2026-03-15 08:19:25] 2026-03-15 07:19:25,477 [wrapper] Test setup, not cleaning
[2026-03-15 08:19:25] 2026-03-15 07:19:25,481 [wrapper] apfmon messages muted
[2026-03-15 08:19:25] 2026-03-15 07:19:25,485 [wrapper] ==== wrapper stdout END ====
[2026-03-15 08:19:25] 2026-03-15 07:19:25,489 [wrapper] ==== wrapper stderr END ====
[2026-03-15 08:19:25]  *** Error codes and diagnostics ***
[2026-03-15 08:19:25]     "exeErrorCode": 0,
[2026-03-15 08:19:25]     "exeErrorDiag": "",
[2026-03-15 08:19:25]     "pilotErrorCode": 0,
[2026-03-15 08:19:25]     "pilotErrorDiag": "",
[2026-03-15 08:19:25]  *** Listing of results directory ***
[2026-03-15 08:19:25] total 401172
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 08:19:25] -rwx------ 1 boinc boinc     36322 Mar 14 17:44 runpilot2-wrapper.sh
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc      5111 Mar 14 17:48 queuedata.json
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc       100 Mar 15 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 08:19:25] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 06:53 run_atlas
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc       105 Mar 15 06:53 job.xml
[2026-03-15 08:19:25] -rw-r--r-- 2 boinc boinc 214925183 Mar 15 06:53 EVNT.48967083._000950.pool.root.1
[2026-03-15 08:19:25] -rw-r--r-- 2 boinc boinc    597525 Mar 15 06:53 input.tar.gz
[2026-03-15 08:19:25] -rw-r--r-- 2 boinc boinc     15845 Mar 15 06:53 start_atlas.sh
[2026-03-15 08:19:25] drwxrwx--x 2 boinc boinc      4096 Mar 15 06:53 shared
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc         0 Mar 15 06:53 boinc_setup_complete
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc      6376 Mar 15 06:53 init_data.xml
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc         0 Mar 15 06:53 boinc_lockfile
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc      2564 Mar 15 06:54 pandaJob.out
[2026-03-15 08:19:25] -rw------- 1 boinc boinc   1006481 Mar 15 06:54 agis_schedconf.cvmfs.json
[2026-03-15 08:19:25] -rw------- 1 boinc boinc   1511579 Mar 15 06:54 agis_ddmendpoints.agis.ALL.json
[2026-03-15 08:19:25] -rw------- 1 boinc boinc       427 Mar 15 06:54 workernode_map.json
[2026-03-15 08:19:25] drwx------ 5 boinc boinc      4096 Mar 15 06:54 pilot3
[2026-03-15 08:19:25] -rw------- 1 boinc boinc 189940258 Mar 15 08:18 HITS.48967085._023635.pool.root.1
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc       529 Mar 15 08:18 boinc_task_state.xml
[2026-03-15 08:19:25] -rw------- 1 boinc boinc      1020 Mar 15 08:18 memory_monitor_summary.json
[2026-03-15 08:19:25] -rw------- 1 boinc boinc        95 Mar 15 08:18 pilot_heartbeat.json
[2026-03-15 08:19:25] -rw------- 1 boinc boinc    267324 Mar 15 08:18 log.48967085._023635.job.log.tgz.1
[2026-03-15 08:19:25] -rw------- 1 boinc boinc      6315 Mar 15 08:18 heartbeat.json
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc        27 Mar 15 08:19 wrapper_checkpoint.txt
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc      8192 Mar 15 08:19 boinc_mmap_file
[2026-03-15 08:19:25] -rw------- 1 boinc boinc      4862 Mar 15 08:19 pilotlog.txt
[2026-03-15 08:19:25] -rw------- 1 boinc boinc    740689 Mar 15 08:19 log.48967085._023635.job.log.1
[2026-03-15 08:19:25] -rw------- 1 boinc boinc       357 Mar 15 08:19 output.list
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc       620 Mar 15 08:19 runtime_log
[2026-03-15 08:19:25] -rw------- 1 boinc boinc   1024000 Mar 15 08:19 result.tar.gz
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc      8896 Mar 15 08:19 runtime_log.err
[2026-03-15 08:19:25] -rw------- 1 boinc boinc       657 Mar 15 08:19 KykMDmMHhL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZ0qLDm2VuuDm.diag
[2026-03-15 08:19:25] -rw-r--r-- 1 boinc boinc      7471 Mar 15 08:19 stderr.txt
[2026-03-15 08:19:25] HITS file was successfully produced:
[2026-03-15 08:19:25] -rw------- 1 boinc boinc 189940258 Mar 15 08:18 shared/HITS.pool.root.1
[2026-03-15 08:19:25]  *** Contents of shared directory: ***
[2026-03-15 08:19:25] total 396988
[2026-03-15 08:19:25] -rw-r--r-- 2 boinc boinc 214925183 Mar 15 06:53 ATLAS.root_0
[2026-03-15 08:19:25] -rw-r--r-- 2 boinc boinc    597525 Mar 15 06:53 input.tar.gz
[2026-03-15 08:19:25] -rw-r--r-- 2 boinc boinc     15845 Mar 15 06:53 start_atlas.sh
[2026-03-15 08:19:25] -rw------- 1 boinc boinc 189940258 Mar 15 08:18 HITS.pool.root.1
[2026-03-15 08:19:25] -rw------- 1 boinc boinc   1024000 Mar 15 08:19 result.tar.gz
08:19:26 (412724): run_atlas exited; CPU time 18926.112324
08:19:26 (412724): called boinc_finish(0)

</stderr_txt>
]]>

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