Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:59:49 (21174): wrapper (7.7.26015): starting
06:59:49 (21174): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 06:59:49] Arguments: --nthreads 8
[2026-03-15 06:59:49] Threads: 8
[2026-03-15 06:59:49] Checking for CVMFS
[2026-03-15 06:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 06:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 06:59:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 06:59:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 06:59:55] 2.11.2.0 13009 128625 131888 157303 0 53 20541854 25165825 96 130560 163 41795193 99.829 29054185 993 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 06:59:55] CVMFS is ok
[2026-03-15 06:59:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 06:59:55] Checking for apptainer binary...
[2026-03-15 06:59:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 06:59:55] Running /usr/bin/apptainer --version
[2026-03-15 06:59:55] apptainer version 1.3.2-1.el7
[2026-03-15 06:59:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 07:00:16] cg-vwn438.simple-grid.lan
[2026-03-15 07:00:16] apptainer works
[2026-03-15 07:00:16] Set ATHENA_PROC_NUMBER=8
[2026-03-15 07:00:16] Set ATHENA_CORE_NUMBER=8
[2026-03-15 07:00:16] Starting ATLAS job with PandaID=7047462565
[2026-03-15 07:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 11:03:09]  *** The last 200 lines of the pilot log: ***
[2026-03-15 11:03:09] 2026-03-15 10:02:12,457 | INFO     | job 7047462565 has finished - writing final server update
[2026-03-15 11:03:09] 2026-03-15 10:02:12,458 | INFO     | total number of processed events: 400 (read)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,460 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7047462565/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,461 | INFO     | extracted standard info from prmon json
[2026-03-15 11:03:09] 2026-03-15 10:02:12,461 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 11:03:09] 2026-03-15 10:02:12,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 11:03:09] 2026-03-15 10:02:12,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 11:03:09] 2026-03-15 10:02:12,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 11:03:09] 2026-03-15 10:02:12,466 | INFO     | fitting pss+swap vs Time
[2026-03-15 11:03:09] 2026-03-15 10:02:12,467 | INFO     | sum of square deviations: 3627000098.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,469 | INFO     | sum of deviations: 92976313460.00003
[2026-03-15 11:03:09] 2026-03-15 10:02:12,469 | INFO     | mean x: 1773561976.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,469 | INFO     | mean y: 2434251.1233480177
[2026-03-15 11:03:09] 2026-03-15 10:02:12,469 | INFO     | intersect: -45461930172.8649
[2026-03-15 11:03:09] 2026-03-15 10:02:12,470 | INFO     | chi2: 9.363299507035642
[2026-03-15 11:03:09] 2026-03-15 10:02:12,470 | INFO     | sum of square deviations: 3392567795.5
[2026-03-15 11:03:09] 2026-03-15 10:02:12,472 | INFO     | sum of deviations: 106098431061.99998
[2026-03-15 11:03:09] 2026-03-15 10:02:12,472 | INFO     | mean x: 1773561823.5
[2026-03-15 11:03:09] 2026-03-15 10:02:12,473 | INFO     | mean y: 2442612.117117117
[2026-03-15 11:03:09] 2026-03-15 10:02:12,473 | INFO     | intersect: -55463546045.32598
[2026-03-15 11:03:09] 2026-03-15 10:02:12,473 | INFO     | chi2: 8.684526150703745
[2026-03-15 11:03:09] 2026-03-15 10:02:12,473 | INFO     | current chi2=8.684526150703745 (change=7.24929663759941 %)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,473 | INFO     | right removable region: 221
[2026-03-15 11:03:09] 2026-03-15 10:02:12,477 | INFO     | sum of square deviations: 3392567795.5
[2026-03-15 11:03:09] 2026-03-15 10:02:12,479 | INFO     | sum of deviations: 13694096149.499996
[2026-03-15 11:03:09] 2026-03-15 10:02:12,479 | INFO     | mean x: 1773562128.5
[2026-03-15 11:03:09] 2026-03-15 10:02:12,479 | INFO     | mean y: 2485792.608108108
[2026-03-15 11:03:09] 2026-03-15 10:02:12,479 | INFO     | intersect: -7156495774.983933
[2026-03-15 11:03:09] 2026-03-15 10:02:12,480 | INFO     | chi2: 4.124893332148378
[2026-03-15 11:03:09] 2026-03-15 10:02:12,480 | INFO     | current chi2=4.124893332148378 (change=55.946156276973646 %)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,480 | INFO     | sum of square deviations: 3168461268.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,482 | INFO     | sum of deviations: -48598039370.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,482 | INFO     | mean x: 1773562281.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,483 | INFO     | mean y: 2528114.603686636
[2026-03-15 11:03:09] 2026-03-15 10:02:12,483 | INFO     | intersect: 27205527383.58039
[2026-03-15 11:03:09] 2026-03-15 10:02:12,483 | INFO     | chi2: 1.1218483069410705
[2026-03-15 11:03:09] 2026-03-15 10:02:12,483 | INFO     | current chi2=1.1218483069410705 (change=72.80297412304779 %)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,484 | INFO     | sum of square deviations: 2954447953.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,485 | INFO     | sum of deviations: -59174924621.5
[2026-03-15 11:03:09] 2026-03-15 10:02:12,486 | INFO     | mean x: 1773562433.5
[2026-03-15 11:03:09] 2026-03-15 10:02:12,486 | INFO     | mean y: 2535600.712264151
[2026-03-15 11:03:09] 2026-03-15 10:02:12,486 | INFO     | intersect: 35525389610.48354
[2026-03-15 11:03:09] 2026-03-15 10:02:12,486 | INFO     | chi2: 0.9725097987589785
[2026-03-15 11:03:09] 2026-03-15 10:02:12,486 | INFO     | current chi2=0.9725097987589785 (change=13.311827210337507 %)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,487 | INFO     | left removable region: 30
[2026-03-15 11:03:09] 2026-03-15 10:02:12,487 | INFO     | sum of square deviations: 2160561440.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,488 | INFO     | sum of deviations: -29105555859.999996
[2026-03-15 11:03:09] 2026-03-15 10:02:12,489 | INFO     | mean x: 1773562708.0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,489 | INFO     | mean y: 2535147.2670157067
[2026-03-15 11:03:09] 2026-03-15 10:02:12,489 | INFO     | intersect: 23894717759.258305
[2026-03-15 11:03:09] 2026-03-15 10:02:12,489 | INFO     | chi2: 0.1510877179011295
[2026-03-15 11:03:09] 2026-03-15 10:02:12,489 | INFO     | current memory leak: -13.47 B/s (using 191 data points, chi2=0.15)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,490 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,490 | INFO     | ..............................
[2026-03-15 11:03:09] 2026-03-15 10:02:12,490 | INFO     | . Timing measurements:
[2026-03-15 11:03:09] 2026-03-15 10:02:12,490 | INFO     | . get job = 0 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,490 | INFO     | . initial setup = 110 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,491 | INFO     | . payload setup = 151 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,491 | INFO     | . stage-in = 0 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,491 | INFO     | . payload execution = 13961 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,491 | INFO     | . stage-out = 4 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,491 | INFO     | . log creation = 1 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,491 | INFO     | ..............................
[2026-03-15 11:03:09] 2026-03-15 10:02:12,640 | INFO     | 
[2026-03-15 11:03:09] 2026-03-15 10:02:12,640 | INFO     | job summary report
[2026-03-15 11:03:09] 2026-03-15 10:02:12,640 | INFO     | --------------------------------------------------
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | PanDA job id: 7047462565
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | task id: 48955010
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | errors: (none)
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | pilot state: finished 
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | transexitcode: 0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | exeerrorcode: 0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | exeerrordiag: 
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | exitcode: 0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,641 | INFO     | exitmsg: OK
[2026-03-15 11:03:09] 2026-03-15 10:02:12,642 | INFO     | cpuconsumptiontime: 51797 s
[2026-03-15 11:03:09] 2026-03-15 10:02:12,642 | INFO     | nevents: 400
[2026-03-15 11:03:09] 2026-03-15 10:02:12,642 | INFO     | neventsw: 0
[2026-03-15 11:03:09] 2026-03-15 10:02:12,648 | INFO     | pid: 29593
[2026-03-15 11:03:09] 2026-03-15 10:02:12,648 | INFO     | pgrp: 29593
[2026-03-15 11:03:09] 2026-03-15 10:02:12,648 | INFO     | corecount: 8
[2026-03-15 11:03:09] 2026-03-15 10:02:12,648 | INFO     | event service: False
[2026-03-15 11:03:09] 2026-03-15 10:02:12,649 | INFO     | sizes: {0: 2279089, 1: 2279774, 2: 2280235, 13: 2280235, 14116: 2310737, 14117: 2310736, 14121: 2319974, 14123: 2320112}
[2026-03-15 11:03:09] 2026-03-15 10:02:12,649 | INFO     | --------------------------------------------------
[2026-03-15 11:03:09] 2026-03-15 10:02:12,649 | INFO     | 
[2026-03-15 11:03:09] 2026-03-15 10:02:12,649 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-15 11:03:09] 2026-03-15 10:02:13,161 | INFO     | time since job start (14137s) is within the limit (345600.0s)
[2026-03-15 11:03:09] 2026-03-15 10:02:13,238 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,241 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 11:03:09] 2026-03-15 10:02:13,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,241 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 11:03:09] 2026-03-15 10:02:13,241 | INFO     | job 7047462565 has completed (purged errors)
[2026-03-15 11:03:09] 2026-03-15 10:02:13,241 | INFO     | overall cleanup function is called
[2026-03-15 11:03:09] 2026-03-15 10:02:14,250 | INFO     | --- collectZombieJob: --- 10, [29593]
[2026-03-15 11:03:09] 2026-03-15 10:02:14,250 | INFO     | zombie collector waiting for pid 29593
[2026-03-15 11:03:09] 2026-03-15 10:02:14,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 11:03:09] 2026-03-15 10:02:14,251 | INFO     | collected zombie processes
[2026-03-15 11:03:09] 2026-03-15 10:02:14,251 | INFO     | will attempt to kill all subprocesses of pid=29593
[2026-03-15 11:03:09] 2026-03-15 10:02:14,356 | INFO     | process IDs to be killed: [29593] (in reverse order)
[2026-03-15 11:03:09] 2026-03-15 10:02:15,271 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 11:03:09] 2026-03-15 10:02:15,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 11:03:09] 2026-03-15 10:02:15,274 | INFO     | did not find any defunct processes belonging to 29593
[2026-03-15 11:03:09] 2026-03-15 10:02:15,276 | INFO     | did not find any defunct processes belonging to 29593
[2026-03-15 11:03:09] 2026-03-15 10:02:15,276 | INFO     | ready for new job
[2026-03-15 11:03:09] 2026-03-15 10:02:15,276 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 11:03:09] 2026-03-15 10:02:15,278 | INFO     | **************************************
[2026-03-15 11:03:09] 2026-03-15 10:02:15,278 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 11:03:09] 2026-03-15 10:02:15,278 | INFO     | **************************************
[2026-03-15 11:03:09] 2026-03-15 10:02:15,278 | INFO     | 
[2026-03-15 11:03:09] 2026-03-15 10:02:15,279 | INFO     | pilot is running in a VM
[2026-03-15 11:03:09] 2026-03-15 10:02:15,279 | INFO     | architecture information:
[2026-03-15 11:03:09] 2026-03-15 10:02:15,282 | INFO     | executing command: cat /etc/os-release
[2026-03-15 11:03:09] 2026-03-15 10:02:15,497 | INFO     | cat /etc/os-release:
[2026-03-15 11:03:09] NAME="CentOS Linux"
[2026-03-15 11:03:09] VERSION="7 (Core)"
[2026-03-15 11:03:09] ID="centos"
[2026-03-15 11:03:09] ID_LIKE="rhel fedora"
[2026-03-15 11:03:09] VERSION_ID="7"
[2026-03-15 11:03:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 11:03:09] ANSI_COLOR="0;31"
[2026-03-15 11:03:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 11:03:09] HOME_URL="https://www.centos.org/"
[2026-03-15 11:03:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 11:03:09] 
[2026-03-15 11:03:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 11:03:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 11:03:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 11:03:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 11:03:09] 
[2026-03-15 11:03:09] 2026-03-15 10:02:15,498 | INFO     | **************************************
[2026-03-15 11:03:09] 2026-03-15 10:02:16,006 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-15 11:03:09] 2026-03-15 10:02:16,198 | INFO     | sufficient remaining disk space (495546531840 B)
[2026-03-15 11:03:09] 2026-03-15 10:02:16,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 11:03:09] 2026-03-15 10:02:16,198 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 11:03:09] 2026-03-15 10:02:16,198 | INFO     | update_server=False
[2026-03-15 11:03:09] 2026-03-15 10:02:16,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 11:03:09] 2026-03-15 10:02:16,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 11:03:09] 2026-03-15 10:02:16,200 | INFO     | aborting loop
[2026-03-15 11:03:09] 2026-03-15 10:02:16,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 11:03:09] 2026-03-15 10:02:16,669 | INFO     | all payload control threads have been joined
[2026-03-15 11:03:09] 2026-03-15 10:02:16,704 | INFO     | all job control threads have been joined
[2026-03-15 11:03:09] 2026-03-15 10:02:16,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 11:03:09] 2026-03-15 10:02:17,050 | INFO     | all data control threads have been joined
[2026-03-15 11:03:09] 2026-03-15 10:02:17,204 | INFO     | [job] retrieve thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,206 | INFO     | [job] job monitor thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,280 | INFO     | [payload] failed_post thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,449 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,627 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 11:03:09] 2026-03-15 10:02:17,675 | INFO     | [payload] control thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,702 | INFO     | [job] validate thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,710 | INFO     | [job] control thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:17,840 | INFO     | [data] copytool_in thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:18,056 | INFO     | [data] control thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:18,076 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:18,317 | INFO     | [data] copytool_out thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:18,468 | INFO     | [payload] validate_post thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:18,662 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:18,666 | INFO     | [job] queue monitor thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:20,961 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 11:03:09] 2026-03-15 10:02:46,264 | INFO     | PID=25160 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 11:03:09] 2026-03-15 10:02:46,264 | INFO     | .. there are 2 such processes running
[2026-03-15 11:03:09] 2026-03-15 10:02:46,266 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 11:03:09] 2026-03-15 10:02:46,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 11:03:09] 2026-03-15 10:02:46,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 11:03:09] 2026-03-15 10:03:00,368 | INFO     | [monitor] cgroup control has ended
[2026-03-15 11:03:09] 2026-03-15 10:03:01,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400984323904)>', '<ExcThread(monitor, started 140400308242176)>']
[2026-03-15 11:03:09] 2026-03-15 10:03:01,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 11:03:09] 2026-03-15 10:03:01,356 | INFO     | [monitor] control thread has ended
[2026-03-15 11:03:09] 2026-03-15 10:03:06,356 | INFO     | all workflow threads have been joined
[2026-03-15 11:03:09] 2026-03-15 10:03:06,356 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 11:03:09] 2026-03-15 10:03:06,357 | INFO     | traces error code: 0
[2026-03-15 11:03:09] 2026-03-15 10:03:06,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 11:03:09] 2026-03-15 10:03:06,936 [wrapper] ==== pilot stdout END ====
[2026-03-15 11:03:09] 2026-03-15 10:03:07,033 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 11:03:09] 2026-03-15 10:03:07,122 [wrapper] pilotpid: 25160
[2026-03-15 11:03:09] 2026-03-15 10:03:07,203 [wrapper] Pilot exit status: 0
[2026-03-15 11:03:09] 2026-03-15 10:03:07,714 [wrapper] pandaids: 7047462565
[2026-03-15 11:03:09] 2026-03-15 10:03:08,894 [wrapper] cleanup supervisor_pilot  3023 25161
[2026-03-15 11:03:09] 2026-03-15 10:03:08,964 [wrapper] Test setup, not cleaning
[2026-03-15 11:03:09] 2026-03-15 10:03:09,071 [wrapper] apfmon messages muted
[2026-03-15 11:03:09] 2026-03-15 10:03:09,146 [wrapper] ==== wrapper stdout END ====
[2026-03-15 11:03:09] 2026-03-15 10:03:09,243 [wrapper] ==== wrapper stderr END ====
[2026-03-15 11:03:09]  *** Error codes and diagnostics ***
[2026-03-15 11:03:09]     "exeErrorCode": 0,
[2026-03-15 11:03:09]     "exeErrorDiag": "",
[2026-03-15 11:03:09]     "pilotErrorCode": 0,
[2026-03-15 11:03:09]     "pilotErrorDiag": "",
[2026-03-15 11:03:09]  *** Listing of results directory ***
[2026-03-15 11:03:09] total 620864
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc    585013 Mar 14 17:40 pilot3.tar.gz
[2026-03-15 11:03:09] -rwx------. 1 boinc boinc     36322 Mar 14 17:42 runpilot2-wrapper.sh
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc      5111 Mar 14 17:43 queuedata.json
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc       100 Mar 15 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 11:03:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 06:59 run_atlas
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc       105 Mar 15 06:59 job.xml
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc      6391 Mar 15 06:59 init_data.xml
[2026-03-15 11:03:09] -rw-r--r--. 2 boinc boinc 441923401 Mar 15 06:59 EVNT.46701403._001981.pool.root.1
[2026-03-15 11:03:09] -rw-r--r--. 2 boinc boinc     15845 Mar 15 06:59 start_atlas.sh
[2026-03-15 11:03:09] drwxrwx--x. 2 boinc boinc        68 Mar 15 06:59 shared
[2026-03-15 11:03:09] -rw-r--r--. 2 boinc boinc    597538 Mar 15 06:59 input.tar.gz
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc         0 Mar 15 06:59 boinc_lockfile
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc      2563 Mar 15 07:00 pandaJob.out
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc       415 Mar 15 07:06 workernode_map.json
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc   1006481 Mar 15 07:06 agis_schedconf.cvmfs.json
[2026-03-15 11:03:09] drwx------. 5 boinc boinc      4096 Mar 15 07:06 pilot3
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc 185036808 Mar 15 11:00 HITS.48955010._047804.pool.root.1
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc       532 Mar 15 11:01 boinc_task_state.xml
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc      1011 Mar 15 11:02 memory_monitor_summary.json
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc   1511579 Mar 15 11:02 agis_ddmendpoints.agis.ALL.json
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc    450739 Mar 15 11:02 log.48955010._047804.job.log.tgz.1
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc      6328 Mar 15 11:02 heartbeat.json
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc        95 Mar 15 11:02 pilot_heartbeat.json
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc      8192 Mar 15 11:03 boinc_mmap_file
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc      4880 Mar 15 11:03 pilotlog.txt
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc        28 Mar 15 11:03 wrapper_checkpoint.txt
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc   1987235 Mar 15 11:03 log.48955010._047804.job.log.1
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc       357 Mar 15 11:03 output.list
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc       620 Mar 15 11:03 runtime_log
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc   2457600 Mar 15 11:03 result.tar.gz
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc      8816 Mar 15 11:03 runtime_log.err
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc       656 Mar 15 11:03 OjyNDm2EhL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkbtLDmKeJ6Jm.diag
[2026-03-15 11:03:09] -rw-r--r--. 1 boinc boinc     20728 Mar 15 11:03 stderr.txt
[2026-03-15 11:03:09] HITS file was successfully produced:
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc 185036808 Mar 15 11:00 shared/HITS.pool.root.1
[2026-03-15 11:03:09]  *** Contents of shared directory: ***
[2026-03-15 11:03:09] total 615272
[2026-03-15 11:03:09] -rw-r--r--. 2 boinc boinc 441923401 Mar 15 06:59 ATLAS.root_0
[2026-03-15 11:03:09] -rw-r--r--. 2 boinc boinc     15845 Mar 15 06:59 start_atlas.sh
[2026-03-15 11:03:09] -rw-r--r--. 2 boinc boinc    597538 Mar 15 06:59 input.tar.gz
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc 185036808 Mar 15 11:00 HITS.pool.root.1
[2026-03-15 11:03:09] -rw-------. 1 boinc boinc   2457600 Mar 15 11:03 result.tar.gz
11:03:10 (21174): run_atlas exited; CPU time 51942.012870
11:03:10 (21174): called boinc_finish(0)

</stderr_txt>
]]>

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