Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:14 (1936382): wrapper (7.7.26015): starting
12:21:14 (1936382): wrapper: running run_atlas (--nthreads 9)
[2026-03-14 12:21:14] Arguments: --nthreads 9
[2026-03-14 12:21:14] Threads: 9
[2026-03-14 12:21:14] Checking for CVMFS
[2026-03-14 12:21:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 12:21:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 12:21:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 12:21:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 12:21:16] 2.13.3.0 6634 114681 389096 157282 2 757 36677334 40960001 20532 16776704 0 232158043 99.588 244274990 38890 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 12:21:16] CVMFS is ok
[2026-03-14 12:21:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 12:21:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 12:21:16] Further information can be found at the LHC@home message board.
[2026-03-14 12:21:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 12:21:16] Checking for apptainer binary...
[2026-03-14 12:21:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 12:21:16] Running /usr/bin/apptainer --version
[2026-03-14 12:21:16] apptainer version 1.4.5-2.el9
[2026-03-14 12:21:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 12:21:16] c-206-37.aglt2.org
[2026-03-14 12:21:16] apptainer works
[2026-03-14 12:21:16] Set ATHENA_PROC_NUMBER=9
[2026-03-14 12:21:16] Set ATHENA_CORE_NUMBER=9
[2026-03-14 12:21:16] Starting ATLAS job with PandaID=7046561916
[2026-03-14 12:21:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 14:40:16]  *** The last 200 lines of the pilot log: ***
[2026-03-14 14:40:16] 2026-03-14 18:39:08,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 14:40:16] 2026-03-14 18:39:08,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 14:40:16] 2026-03-14 18:39:08,495 | INFO     | fitting pss+swap vs Time
[2026-03-14 14:40:16] 2026-03-14 18:39:08,496 | INFO     | sum of square deviations: 762874672.9333341
[2026-03-14 14:40:16] 2026-03-14 18:39:08,496 | INFO     | sum of deviations: -434052790.2222271
[2026-03-14 14:40:16] 2026-03-14 18:39:08,496 | INFO     | mean x: 1773509429.088889
[2026-03-14 14:40:16] 2026-03-14 18:39:08,496 | INFO     | mean y: 2557681.5185185187
[2026-03-14 14:40:16] 2026-03-14 18:39:08,496 | INFO     | intersect: 1011631312.4748474
[2026-03-14 14:40:16] 2026-03-14 18:39:08,497 | INFO     | chi2: 2.3561327832270242
[2026-03-14 14:40:16] 2026-03-14 18:39:08,497 | INFO     | sum of square deviations: 681211685.3923067
[2026-03-14 14:40:16] 2026-03-14 18:39:08,497 | INFO     | sum of deviations: 9156855352.976934
[2026-03-14 14:40:16] 2026-03-14 18:39:08,498 | INFO     | mean x: 1773509276.5923078
[2026-03-14 14:40:16] 2026-03-14 18:39:08,498 | INFO     | mean y: 2575072.376923077
[2026-03-14 14:40:16] 2026-03-14 18:39:08,498 | INFO     | intersect: -23836957133.48375
[2026-03-14 14:40:16] 2026-03-14 18:39:08,498 | INFO     | chi2: 1.5608725896000104
[2026-03-14 14:40:16] 2026-03-14 18:39:08,498 | INFO     | current chi2=1.5608725896000104 (change=33.7527748558298 %)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,498 | INFO     | sum of square deviations: 605595322.8480012
[2026-03-14 14:40:16] 2026-03-14 18:39:08,499 | INFO     | sum of deviations: 9294851853.824001
[2026-03-14 14:40:16] 2026-03-14 18:39:08,499 | INFO     | mean x: 1773509124.096
[2026-03-14 14:40:16] 2026-03-14 18:39:08,499 | INFO     | mean y: 2575350.848
[2026-03-14 14:40:16] 2026-03-14 18:39:08,499 | INFO     | intersect: -27217754707.769283
[2026-03-14 14:40:16] 2026-03-14 18:39:08,500 | INFO     | chi2: 1.563138743023822
[2026-03-14 14:40:16] 2026-03-14 18:39:08,500 | INFO     | current chi2=1.563138743023822 (change=-0.14518503553145612 %)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,500 | INFO     | right removable region: 124
[2026-03-14 14:40:16] 2026-03-14 18:39:08,500 | INFO     | sum of square deviations: 681204365.3923067
[2026-03-14 14:40:16] 2026-03-14 18:39:08,501 | INFO     | sum of deviations: -22179141105.415375
[2026-03-14 14:40:16] 2026-03-14 18:39:08,501 | INFO     | mean x: 1773509581.5923078
[2026-03-14 14:40:16] 2026-03-14 18:39:08,501 | INFO     | mean y: 2597644.7846153844
[2026-03-14 14:40:16] 2026-03-14 18:39:08,501 | INFO     | intersect: 57745796690.91659
[2026-03-14 14:40:16] 2026-03-14 18:39:08,501 | INFO     | chi2: 0.8548386833149487
[2026-03-14 14:40:16] 2026-03-14 18:39:08,501 | INFO     | current chi2=0.8548386833149487 (change=63.71856928436189 %)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,502 | INFO     | sum of square deviations: 605588734.0320001
[2026-03-14 14:40:16] 2026-03-14 18:39:08,502 | INFO     | sum of deviations: -21731439512.944
[2026-03-14 14:40:16] 2026-03-14 18:39:08,502 | INFO     | mean x: 1773509734.088
[2026-03-14 14:40:16] 2026-03-14 18:39:08,502 | INFO     | mean y: 2596712.904
[2026-03-14 14:40:16] 2026-03-14 18:39:08,503 | INFO     | intersect: 63644664912.13543
[2026-03-14 14:40:16] 2026-03-14 18:39:08,503 | INFO     | chi2: 0.8509735222168415
[2026-03-14 14:40:16] 2026-03-14 18:39:08,503 | INFO     | current chi2=0.8509735222168415 (change=0.4521509348545884 %)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,503 | INFO     | left removable region: 20
[2026-03-14 14:40:16] 2026-03-14 18:39:08,503 | INFO     | sum of square deviations: 348773243.0384616
[2026-03-14 14:40:16] 2026-03-14 18:39:08,504 | INFO     | sum of deviations: -9028581147.21154
[2026-03-14 14:40:16] 2026-03-14 18:39:08,504 | INFO     | mean x: 1773509703.5961537
[2026-03-14 14:40:16] 2026-03-14 18:39:08,504 | INFO     | mean y: 2614232.471153846
[2026-03-14 14:40:16] 2026-03-14 18:39:08,504 | INFO     | intersect: 45912891450.9537
[2026-03-14 14:40:16] 2026-03-14 18:39:08,504 | INFO     | chi2: 0.018728801024491766
[2026-03-14 14:40:16] 2026-03-14 18:39:08,504 | INFO     | current memory leak: -25.89 B/s (using 104 data points, chi2=0.02)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | could have reported an average CPU frequency of 3291 MHz (8 samples)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | ..............................
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . Timing measurements:
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . get job = 0 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . initial setup = 16 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . payload setup = 15 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . stage-in = 0 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . payload execution = 8207 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . stage-out = 0 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | . log creation = 0 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,505 | INFO     | ..............................
[2026-03-14 14:40:16] 2026-03-14 18:39:08,670 | WARNING  | process 1945336 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 14:40:16] 2026-03-14 18:39:08,670 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046561916/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,811 | INFO     | time since job start (8232s) is within the limit (345600.0s)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,954 | INFO     | 
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | job summary report
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | --------------------------------------------------
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | PanDA job id: 7046561916
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | task id: 48955010
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | errors: (none)
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | pilot state: finished 
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | transexitcode: 0
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | exeerrorcode: 0
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | exeerrordiag: 
[2026-03-14 14:40:16] 2026-03-14 18:39:08,957 | INFO     | exitcode: 0
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | exitmsg: OK
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | cpuconsumptiontime: 30450 s
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | nevents: 400
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | neventsw: 0
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | pid: 1945336
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | pgrp: 1945336
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | corecount: 9
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | event service: False
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | sizes: {0: 2273127, 1: 2280208, 8227: 2308044, 8228: 2317042, 8231: 2317292}
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | --------------------------------------------------
[2026-03-14 14:40:16] 2026-03-14 18:39:08,958 | INFO     | 
[2026-03-14 14:40:16] 2026-03-14 18:39:08,959 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 14:40:16] 2026-03-14 18:39:08,978 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,023 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | job 7046561916 has completed (purged errors)
[2026-03-14 14:40:16] 2026-03-14 18:39:09,034 | INFO     | overall cleanup function is called
[2026-03-14 14:40:16] 2026-03-14 18:39:09,046 | INFO     | number of running child processes to parent process 1945336: 1
[2026-03-14 14:40:16] 2026-03-14 18:39:09,047 | INFO     | maximum number of monitored processes: 6
[2026-03-14 14:40:16] 2026-03-14 18:39:09,047 | INFO     | aborting job monitoring since job object (job id=7046561916) has expired
[2026-03-14 14:40:16] 2026-03-14 18:39:10,044 | INFO     | --- collectZombieJob: --- 10, [1945336]
[2026-03-14 14:40:16] 2026-03-14 18:39:10,044 | INFO     | zombie collector waiting for pid 1945336
[2026-03-14 14:40:16] 2026-03-14 18:39:10,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 14:40:16] 2026-03-14 18:39:10,044 | INFO     | collected zombie processes
[2026-03-14 14:40:16] 2026-03-14 18:39:10,044 | INFO     | will attempt to kill all subprocesses of pid=1945336
[2026-03-14 14:40:16] 2026-03-14 18:39:10,674 | INFO     | process IDs to be killed: [1945336] (in reverse order)
[2026-03-14 14:40:16] 2026-03-14 18:39:10,871 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 14:40:16] 2026-03-14 18:39:10,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 14:40:16] 2026-03-14 18:39:10,886 | INFO     | did not find any defunct processes belonging to 1945336
[2026-03-14 14:40:16] 2026-03-14 18:39:10,898 | INFO     | did not find any defunct processes belonging to 1945336
[2026-03-14 14:40:16] 2026-03-14 18:39:10,899 | INFO     | ready for new job
[2026-03-14 14:40:16] 2026-03-14 18:39:10,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 14:40:16] 2026-03-14 18:39:10,900 | INFO     | **************************************
[2026-03-14 14:40:16] 2026-03-14 18:39:10,900 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 14:40:16] 2026-03-14 18:39:10,901 | INFO     | **************************************
[2026-03-14 14:40:16] 2026-03-14 18:39:10,901 | INFO     | 
[2026-03-14 14:40:16] 2026-03-14 18:39:10,905 | INFO     | architecture information:
[2026-03-14 14:40:16] 2026-03-14 18:39:10,908 | INFO     | executing command: cat /etc/os-release
[2026-03-14 14:40:16] 2026-03-14 18:39:10,989 | INFO     | cat /etc/os-release:
[2026-03-14 14:40:16] NAME="CentOS Linux"
[2026-03-14 14:40:16] VERSION="7 (Core)"
[2026-03-14 14:40:16] ID="centos"
[2026-03-14 14:40:16] ID_LIKE="rhel fedora"
[2026-03-14 14:40:16] VERSION_ID="7"
[2026-03-14 14:40:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 14:40:16] ANSI_COLOR="0;31"
[2026-03-14 14:40:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 14:40:16] HOME_URL="https://www.centos.org/"
[2026-03-14 14:40:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 14:40:16] 
[2026-03-14 14:40:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 14:40:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 14:40:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 14:40:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 14:40:16] 
[2026-03-14 14:40:16] 2026-03-14 18:39:10,989 | INFO     | **************************************
[2026-03-14 14:40:16] 2026-03-14 18:39:11,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 14:40:16] 2026-03-14 18:39:11,625 | INFO     | sufficient remaining disk space (83915440128 B)
[2026-03-14 14:40:16] 2026-03-14 18:39:11,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 14:40:16] 2026-03-14 18:39:11,625 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 14:40:16] 2026-03-14 18:39:11,625 | INFO     | update_server=False
[2026-03-14 14:40:16] 2026-03-14 18:39:11,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 14:40:16] 2026-03-14 18:39:11,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 14:40:16] 2026-03-14 18:39:11,821 | INFO     | all data control threads have been joined
[2026-03-14 14:40:16] 2026-03-14 18:39:12,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:40:16] 2026-03-14 18:39:12,563 | INFO     | aborting loop
[2026-03-14 14:40:16] 2026-03-14 18:39:12,585 | INFO     | all payload control threads have been joined
[2026-03-14 14:40:16] 2026-03-14 18:39:12,648 | INFO     | [job] retrieve thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:12,685 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:12,828 | INFO     | [data] control thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:12,858 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,057 | INFO     | all job control threads have been joined
[2026-03-14 14:40:16] 2026-03-14 18:39:13,182 | INFO     | [job] validate thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,290 | INFO     | [payload] failed_post thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,569 | INFO     | [job] job monitor thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,591 | INFO     | [payload] control thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,602 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:40:16] 2026-03-14 18:39:13,635 | INFO     | [data] copytool_out thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,701 | INFO     | [payload] validate_post thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:13,704 | INFO     | [data] copytool_in thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:14,063 | INFO     | [job] control thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:14,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 14:40:16] 2026-03-14 18:39:14,615 | INFO     | [job] queue monitor thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:18,498 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:22,562 | INFO     | job.realtimelogging is not enabled
[2026-03-14 14:40:16] 2026-03-14 18:39:23,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 14:40:16] 2026-03-14 18:39:40,849 | INFO     | 8251s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-14 14:40:16] 2026-03-14 18:39:42,545 | INFO     | PID=1940248 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 14:40:16] 2026-03-14 18:39:42,545 | INFO     | .. there are 24 such processes running
[2026-03-14 14:40:16] 2026-03-14 18:39:42,546 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 14:40:16] 2026-03-14 18:39:42,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 14:40:16] 2026-03-14 18:39:42,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 14:40:16] 2026-03-14 18:40:09,967 | INFO     | [monitor] cgroup control has ended
[2026-03-14 14:40:16] 2026-03-14 18:40:10,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536732854080)>', '<ExcThread(monitor, started 140536379840256)>']
[2026-03-14 14:40:16] 2026-03-14 18:40:10,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 14:40:16] 2026-03-14 18:40:10,767 | INFO     | [monitor] control thread has ended
[2026-03-14 14:40:16] 2026-03-14 18:40:15,707 | INFO     | all workflow threads have been joined
[2026-03-14 14:40:16] 2026-03-14 18:40:15,707 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 14:40:16] 2026-03-14 18:40:15,708 | INFO     | traces error code: 0
[2026-03-14 14:40:16] 2026-03-14 18:40:15,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 14:40:16] 2026-03-14 18:40:15,911 [wrapper] ==== pilot stdout END ====
[2026-03-14 14:40:16] 2026-03-14 18:40:15,914 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 14:40:16] 2026-03-14 18:40:15,916 [wrapper] pilotpid: 1940248
[2026-03-14 14:40:16] 2026-03-14 18:40:15,918 [wrapper] Pilot exit status: 0
[2026-03-14 14:40:16] 2026-03-14 18:40:15,930 [wrapper] pandaids: 7046561916
[2026-03-14 14:40:16] 2026-03-14 18:40:16,104 [wrapper] cleanup supervisor_pilot 2219985 1940249
[2026-03-14 14:40:16] 2026-03-14 18:40:16,110 [wrapper] Test setup, not cleaning
[2026-03-14 14:40:16] 2026-03-14 18:40:16,113 [wrapper] apfmon messages muted
[2026-03-14 14:40:16] 2026-03-14 18:40:16,116 [wrapper] ==== wrapper stdout END ====
[2026-03-14 14:40:16] 2026-03-14 18:40:16,152 [wrapper] ==== wrapper stderr END ====
[2026-03-14 14:40:16]  *** Error codes and diagnostics ***
[2026-03-14 14:40:16]     "exeErrorCode": 0,
[2026-03-14 14:40:16]     "exeErrorDiag": "",
[2026-03-14 14:40:16]     "pilotErrorCode": 0,
[2026-03-14 14:40:16]     "pilotErrorDiag": "",
[2026-03-14 14:40:16]  *** Listing of results directory ***
[2026-03-14 14:40:16] total 618420
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas    585013 Mar 14 05:56 pilot3.tar.gz
[2026-03-14 14:40:16] -rwx------. 1 boincer umatlas     36322 Mar 14 06:00 runpilot2-wrapper.sh
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas      5111 Mar 14 06:01 queuedata.json
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas       100 Mar 14 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 14:40:16] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 12:21 run_atlas
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas       105 Mar 14 12:21 job.xml
[2026-03-14 14:40:16] -rw-r--r--. 2 boincer umatlas 440363504 Mar 14 12:21 EVNT.46701403._001868.pool.root.1
[2026-03-14 14:40:16] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 12:21 shared
[2026-03-14 14:40:16] -rw-r--r--. 2 boincer umatlas    597527 Mar 14 12:21 input.tar.gz
[2026-03-14 14:40:16] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 12:21 start_atlas.sh
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas         0 Mar 14 12:21 boinc_lockfile
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas      2564 Mar 14 12:21 pandaJob.out
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas        57 Mar 14 12:21 setup.sh.local
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas   1004579 Mar 14 12:21 agis_schedconf.cvmfs.json
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas   1511579 Mar 14 12:21 agis_ddmendpoints.agis.ALL.json
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas       430 Mar 14 12:21 workernode_map.json
[2026-03-14 14:40:16] drwx------. 5 boincer umatlas      4096 Mar 14 12:21 pilot3
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas 185949163 Mar 14 14:38 HITS.48955010._042352.pool.root.1
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas       530 Mar 14 14:38 boinc_task_state.xml
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas      1035 Mar 14 14:39 memory_monitor_summary.json
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas    389056 Mar 14 14:39 log.48955010._042352.job.log.tgz.1
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas      6337 Mar 14 14:39 heartbeat.json
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas        95 Mar 14 14:39 pilot_heartbeat.json
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas      6907 Mar 14 14:39 init_data.xml
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas        27 Mar 14 14:39 wrapper_checkpoint.txt
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas      5007 Mar 14 14:40 pilotlog.txt
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas   1115382 Mar 14 14:40 log.48955010._042352.job.log.1
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 14:40 boinc_mmap_file
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas       357 Mar 14 14:40 output.list
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas       620 Mar 14 14:40 runtime_log
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas   1525760 Mar 14 14:40 result.tar.gz
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas      9341 Mar 14 14:40 runtime_log.err
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas       653 Mar 14 14:40 dWYKDmtyaL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVBqLDmnGSWQm.diag
[2026-03-14 14:40:16] -rw-r--r--. 1 boincer umatlas     16388 Mar 14 14:40 stderr.txt
[2026-03-14 14:40:16] HITS file was successfully produced:
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas 185949163 Mar 14 14:38 shared/HITS.pool.root.1
[2026-03-14 14:40:16]  *** Contents of shared directory: ***
[2026-03-14 14:40:16] total 613736
[2026-03-14 14:40:16] -rw-r--r--. 2 boincer umatlas 440363504 Mar 14 12:21 ATLAS.root_0
[2026-03-14 14:40:16] -rw-r--r--. 2 boincer umatlas    597527 Mar 14 12:21 input.tar.gz
[2026-03-14 14:40:16] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 12:21 start_atlas.sh
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas 185949163 Mar 14 14:38 HITS.pool.root.1
[2026-03-14 14:40:16] -rw-------. 1 boincer umatlas   1525760 Mar 14 14:40 result.tar.gz
14:40:17 (1936382): run_atlas exited; CPU time 30589.136929
14:40:17 (1936382): called boinc_finish(0)

</stderr_txt>
]]>

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