Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:52:19 (2423825): wrapper (7.7.26015): starting
19:52:19 (2423825): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 19:52:19] Arguments: --nthreads 4
[2026-03-15 19:52:19] Threads: 4
[2026-03-15 19:52:19] Checking for CVMFS
[2026-03-15 19:52:19] No cvmfs_config command found, will try listing directly
[2026-03-15 19:52:19] CVMFS is ok
[2026-03-15 19:52:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 19:52:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 19:52:19] Further information can be found at the LHC@home message board.
[2026-03-15 19:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 19:52:19] Checking for apptainer binary...
[2026-03-15 19:52:19] which: no apptainer in ((null))
[2026-03-15 19:52:19] apptainer is not installed, using version from CVMFS
[2026-03-15 19:52:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 19:52:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-15 19:52:19] apptainer works
[2026-03-15 19:52:19] Set ATHENA_PROC_NUMBER=4
[2026-03-15 19:52:19] Set ATHENA_CORE_NUMBER=4
[2026-03-15 19:52:19] Starting ATLAS job with PandaID=7046562033
[2026-03-15 19:52:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 21:07:45]  *** The last 200 lines of the pilot log: ***
[2026-03-15 21:07:45]  guid=11635cc6-b39f-4d0e-8a9c-ad657437f8da
[2026-03-15 21:07:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 21:07:45]  is_altstaged=None
[2026-03-15 21:07:45]  is_tar=False
[2026-03-15 21:07:45]  lfn=log.48955010._042469.job.log.tgz.1
[2026-03-15 21:07:45]  mtime=0
[2026-03-15 21:07:45]  protocol_id=None
[2026-03-15 21:07:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 21:07:45]  replicas=None
[2026-03-15 21:07:45]  scope=mc23_13p6TeV
[2026-03-15 21:07:45]  status=None
[2026-03-15 21:07:45]  status_code=0
[2026-03-15 21:07:45]  storage_token=
[2026-03-15 21:07:45]  surl=/var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7046562033/log.48955010._042469.job.log.tgz.1
[2026-03-15 21:07:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/e1/log.48955010._042469.job.log.tgz.1
[2026-03-15 21:07:45]  workdir=None
[2026-03-15 21:07:45] ]
[2026-03-15 21:07:45] 2026-03-15 20:06:45,832 | INFO     | transferring file log.48955010._042469.job.log.tgz.1 from /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7046562033/log.48955010._042469.job.log.tgz.1 to /var/lib/
[2026-03-15 21:07:45] 2026-03-15 20:06:45,832 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7046562033/log.48955010._042469.job.log.tgz.1 /var/lib/boinc/var/slot100/slots/2/
[2026-03-15 21:07:45] 2026-03-15 20:06:45,849 | INFO     | adding to output.list: log.48955010._042469.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/e1/log.48955010._042469.job.log.tg
[2026-03-15 21:07:45] 2026-03-15 20:06:45,849 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 21:07:45] 2026-03-15 20:06:45,849 | INFO     | summary of transferred files:
[2026-03-15 21:07:45] 2026-03-15 20:06:45,849 | INFO     |  -- lfn=log.48955010._042469.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 21:07:45] 2026-03-15 20:06:45,850 | INFO     | stage-out finished correctly
[2026-03-15 21:07:45] 2026-03-15 20:06:47,306 | INFO     | time since job start (4456s) is within the limit (345600.0s)
[2026-03-15 21:07:45] 2026-03-15 20:06:47,744 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 21:07:45] 2026-03-15 20:06:48,206 | INFO     | job 7046562033 has state=finished
[2026-03-15 21:07:45] 2026-03-15 20:06:48,207 | INFO     | preparing for final server update for job 7046562033 in state='finished'
[2026-03-15 21:07:45] 2026-03-15 20:06:48,207 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7046562033/jobReport.json
[2026-03-15 21:07:45] 2026-03-15 20:06:48,208 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/2/workernode_map.json
[2026-03-15 21:07:45] 2026-03-15 20:06:48,209 | INFO     | this job has now completed (state=finished)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,209 | INFO     | log transfer has been attempted: DONE
[2026-03-15 21:07:45] 2026-03-15 20:06:48,209 | INFO     | job 7046562033 has finished - writing final server update
[2026-03-15 21:07:45] 2026-03-15 20:06:48,209 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2961996/.job.ad'
[2026-03-15 21:07:45] 2026-03-15 20:06:48,209 | INFO     | total number of processed events: 400 (read)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,226 | INFO     | using path: /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7046562033/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,226 | INFO     | extracted standard info from prmon json
[2026-03-15 21:07:45] 2026-03-15 20:06:48,226 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 21:07:45] 2026-03-15 20:06:48,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 21:07:45] 2026-03-15 20:06:48,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 21:07:45] 2026-03-15 20:06:48,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 21:07:45] 2026-03-15 20:06:48,227 | INFO     | fitting pss+swap vs Time
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | sum of square deviations: 89127252.5
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | sum of deviations: 244232470.99999997
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | mean x: 1773603060.5
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | mean y: 2322521.8181818184
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | intersect: -4857823459.2225485
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | chi2: 0.00015927392533268727
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | current memory leak: 2.74 B/s (using 66 data points, chi2=0.00)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | could have reported an average CPU frequency of 3648 MHz (6 samples)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | ..............................
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . Timing measurements:
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . get job = 0 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . initial setup = 5 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . payload setup = 5 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . stage-in = 0 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . payload execution = 4432 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . stage-out = 0 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | . log creation = 0 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,228 | INFO     | ..............................
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | 
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | job summary report
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | --------------------------------------------------
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | PanDA job id: 7046562033
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | task id: 48955010
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | errors: (none)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | pilot state: finished 
[2026-03-15 21:07:45] 2026-03-15 20:06:48,593 | INFO     | transexitcode: 0
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | exeerrorcode: 0
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | exeerrordiag: 
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | exitcode: 0
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | exitmsg: OK
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | cpuconsumptiontime: 16924 s
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | nevents: 400
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | neventsw: 0
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | pid: 2463430
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | pgrp: 2463430
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | corecount: 4
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | event service: False
[2026-03-15 21:07:45] 2026-03-15 20:06:48,594 | INFO     | sizes: {0: 2279760, 1: 2280221, 11: 2280221, 4442: 2306396, 4444: 2315418, 4446: 2315796}
[2026-03-15 21:07:45] 2026-03-15 20:06:48,597 | INFO     | --------------------------------------------------
[2026-03-15 21:07:45] 2026-03-15 20:06:48,598 | INFO     | 
[2026-03-15 21:07:45] 2026-03-15 20:06:48,598 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/2
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,614 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,615 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 21:07:45] 2026-03-15 20:06:48,615 | INFO     | job 7046562033 has completed (purged errors)
[2026-03-15 21:07:45] 2026-03-15 20:06:48,615 | INFO     | overall cleanup function is called
[2026-03-15 21:07:45] 2026-03-15 20:06:49,621 | INFO     | --- collectZombieJob: --- 10, [2463430]
[2026-03-15 21:07:45] 2026-03-15 20:06:49,622 | INFO     | zombie collector waiting for pid 2463430
[2026-03-15 21:07:45] 2026-03-15 20:06:49,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 21:07:45] 2026-03-15 20:06:49,622 | INFO     | collected zombie processes
[2026-03-15 21:07:45] 2026-03-15 20:06:49,622 | INFO     | will attempt to kill all subprocesses of pid=2463430
[2026-03-15 21:07:45] 2026-03-15 20:06:49,953 | INFO     | process IDs to be killed: [2463430] (in reverse order)
[2026-03-15 21:07:45] 2026-03-15 20:06:50,158 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 21:07:45] 2026-03-15 20:06:50,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 21:07:45] 2026-03-15 20:06:50,189 | INFO     | did not find any defunct processes belonging to 2463430
[2026-03-15 21:07:45] 2026-03-15 20:06:50,220 | INFO     | did not find any defunct processes belonging to 2463430
[2026-03-15 21:07:45] 2026-03-15 20:06:50,220 | INFO     | ready for new job
[2026-03-15 21:07:45] 2026-03-15 20:06:50,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 21:07:45] 2026-03-15 20:06:50,222 | INFO     | **************************************
[2026-03-15 21:07:45] 2026-03-15 20:06:50,222 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 21:07:45] 2026-03-15 20:06:50,222 | INFO     | **************************************
[2026-03-15 21:07:45] 2026-03-15 20:06:50,222 | INFO     | 
[2026-03-15 21:07:45] 2026-03-15 20:06:50,228 | INFO     | architecture information:
[2026-03-15 21:07:45] 2026-03-15 20:06:50,229 | INFO     | executing command: cat /etc/os-release
[2026-03-15 21:07:45] 2026-03-15 20:06:50,243 | INFO     | cat /etc/os-release:
[2026-03-15 21:07:45] NAME="CentOS Linux"
[2026-03-15 21:07:45] VERSION="7 (Core)"
[2026-03-15 21:07:45] ID="centos"
[2026-03-15 21:07:45] ID_LIKE="rhel fedora"
[2026-03-15 21:07:45] VERSION_ID="7"
[2026-03-15 21:07:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 21:07:45] ANSI_COLOR="0;31"
[2026-03-15 21:07:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 21:07:45] HOME_URL="https://www.centos.org/"
[2026-03-15 21:07:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 21:07:45] 
[2026-03-15 21:07:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 21:07:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 21:07:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 21:07:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 21:07:45] 
[2026-03-15 21:07:45] 2026-03-15 20:06:50,244 | INFO     | **************************************
[2026-03-15 21:07:45] 2026-03-15 20:06:50,747 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/2
[2026-03-15 21:07:45] 2026-03-15 20:06:50,764 | INFO     | sufficient remaining disk space (173239435264 B)
[2026-03-15 21:07:45] 2026-03-15 20:06:50,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 21:07:45] 2026-03-15 20:06:50,764 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 21:07:45] 2026-03-15 20:06:50,764 | INFO     | update_server=False
[2026-03-15 21:07:45] 2026-03-15 20:06:50,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 21:07:45] 2026-03-15 20:06:50,776 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 21:07:45] 2026-03-15 20:06:50,776 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 21:07:45] 2026-03-15 20:06:50,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 21:07:45] 2026-03-15 20:06:50,776 | INFO     | will abort loop
[2026-03-15 21:07:45] 2026-03-15 20:06:51,405 | INFO     | all data control threads have been joined
[2026-03-15 21:07:45] 2026-03-15 20:06:51,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 21:07:45] 2026-03-15 20:06:51,770 | INFO     | [job] retrieve thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:51,781 | INFO     | [job] job monitor thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:51,922 | INFO     | all job control threads have been joined
[2026-03-15 21:07:45] 2026-03-15 20:06:51,955 | INFO     | all payload control threads have been joined
[2026-03-15 21:07:45] 2026-03-15 20:06:52,410 | INFO     | [data] control thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,600 | INFO     | [job] validate thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,601 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,602 | INFO     | [payload] failed_post thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,718 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,879 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,927 | INFO     | [job] control thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:52,960 | INFO     | [payload] control thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:53,111 | INFO     | [payload] validate_post thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:53,149 | INFO     | [data] copytool_in thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:53,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 21:07:45] 2026-03-15 20:06:53,412 | INFO     | [data] copytool_out thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:53,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 21:07:45] 2026-03-15 20:06:54,285 | INFO     | [job] queue monitor thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:06:57,805 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:07:01,373 | INFO     | job.realtimelogging is not enabled
[2026-03-15 21:07:45] 2026-03-15 20:07:02,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 21:07:45] 2026-03-15 20:07:20,925 | INFO     | PID=2440383 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 21:07:45] 2026-03-15 20:07:20,926 | INFO     | .. there are 39 such processes running
[2026-03-15 21:07:45] 2026-03-15 20:07:20,926 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 21:07:45] 2026-03-15 20:07:20,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 21:07:45] 2026-03-15 20:07:20,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 21:07:45] 2026-03-15 20:07:26,013 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-15 21:07:45] 2026-03-15 20:07:38,379 | INFO     | [monitor] cgroup control has ended
[2026-03-15 21:07:45] 2026-03-15 20:07:40,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23123212748608)>', '<ExcThread(monitor, started 23122970679040)>']
[2026-03-15 21:07:45] 2026-03-15 20:07:41,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 21:07:45] 2026-03-15 20:07:41,022 | INFO     | [monitor] control thread has ended
[2026-03-15 21:07:45] 2026-03-15 20:07:45,225 | INFO     | all workflow threads have been joined
[2026-03-15 21:07:45] 2026-03-15 20:07:45,225 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 21:07:45] 2026-03-15 20:07:45,225 | INFO     | traces error code: 0
[2026-03-15 21:07:45] 2026-03-15 20:07:45,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 21:07:45] 2026-03-15 20:07:45,396 [wrapper] ==== pilot stdout END ====
[2026-03-15 21:07:45] 2026-03-15 20:07:45,399 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 21:07:45] 2026-03-15 20:07:45,401 [wrapper] pilotpid: 2440383
[2026-03-15 21:07:45] 2026-03-15 20:07:45,403 [wrapper] Pilot exit status: 0
[2026-03-15 21:07:45] 2026-03-15 20:07:45,410 [wrapper] pandaids: 7046562033
[2026-03-15 21:07:45] 2026-03-15 20:07:45,540 [wrapper] cleanup supervisor_pilot 3084323 2440384
[2026-03-15 21:07:45] 2026-03-15 20:07:45,542 [wrapper] Test setup, not cleaning
[2026-03-15 21:07:45] 2026-03-15 20:07:45,544 [wrapper] apfmon messages muted
[2026-03-15 21:07:45] 2026-03-15 20:07:45,546 [wrapper] ==== wrapper stdout END ====
[2026-03-15 21:07:45] 2026-03-15 20:07:45,548 [wrapper] ==== wrapper stderr END ====
[2026-03-15 21:07:45]  *** Error codes and diagnostics ***
[2026-03-15 21:07:45]     "exeErrorCode": 0,
[2026-03-15 21:07:45]     "exeErrorDiag": "",
[2026-03-15 21:07:45]     "pilotErrorCode": 0,
[2026-03-15 21:07:45]     "pilotErrorDiag": "",
[2026-03-15 21:07:45]  *** Listing of results directory ***
[2026-03-15 21:07:45] total 624340
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc    585013 Mar 14 10:56 pilot3.tar.gz
[2026-03-15 21:07:45] -rwx------. 1 boinc boinc     36322 Mar 14 10:58 runpilot2-wrapper.sh
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc      5111 Mar 14 11:01 queuedata.json
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc       100 Mar 15 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 21:07:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 19:52 run_atlas
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc       105 Mar 15 19:52 job.xml
[2026-03-15 21:07:45] -rw-r--r--. 2 boinc boinc 441239616 Mar 15 19:52 EVNT.46701403._001870.pool.root.1
[2026-03-15 21:07:45] -rw-r--r--. 2 boinc boinc     15845 Mar 15 19:52 start_atlas.sh
[2026-03-15 21:07:45] drwxrwx--x. 2 boinc boinc      4096 Mar 15 19:52 shared
[2026-03-15 21:07:45] -rw-r--r--. 2 boinc boinc    597533 Mar 15 19:52 input.tar.gz
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc      6710 Mar 15 19:52 init_data.xml
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc         0 Mar 15 19:52 boinc_lockfile
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc      2564 Mar 15 19:52 pandaJob.out
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc   1006473 Mar 15 19:52 agis_schedconf.cvmfs.json
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc   1511579 Mar 15 19:52 agis_ddmendpoints.agis.ALL.json
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc       444 Mar 15 19:52 workernode_map.json
[2026-03-15 21:07:45] drwx------. 5 boinc boinc      4096 Mar 15 19:52 pilot3
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc 192273142 Mar 15 21:06 HITS.48955010._042469.pool.root.1
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc       530 Mar 15 21:06 boinc_task_state.xml
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc      1031 Mar 15 21:06 memory_monitor_summary.json
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc    281060 Mar 15 21:06 log.48955010._042469.job.log.tgz.1
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc      6353 Mar 15 21:06 heartbeat.json
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc        95 Mar 15 21:07 pilot_heartbeat.json
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc      8192 Mar 15 21:07 boinc_mmap_file
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc        27 Mar 15 21:07 wrapper_checkpoint.txt
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc      5089 Mar 15 21:07 pilotlog.txt
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc    660066 Mar 15 21:07 log.48955010._042469.job.log.1
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc       357 Mar 15 21:07 output.list
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc       620 Mar 15 21:07 runtime_log
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc    962560 Mar 15 21:07 result.tar.gz
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc      9221 Mar 15 21:07 runtime_log.err
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc       662 Mar 15 21:07 Go4KDmNwaL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4msLDm5EIqMo.diag
[2026-03-15 21:07:45] -rw-r--r--. 1 boinc boinc     10326 Mar 15 21:07 stderr.txt
[2026-03-15 21:07:45] HITS file was successfully produced:
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc 192273142 Mar 15 21:06 shared/HITS.pool.root.1
[2026-03-15 21:07:45]  *** Contents of shared directory: ***
[2026-03-15 21:07:45] total 620216
[2026-03-15 21:07:45] -rw-r--r--. 2 boinc boinc 441239616 Mar 15 19:52 ATLAS.root_0
[2026-03-15 21:07:45] -rw-r--r--. 2 boinc boinc     15845 Mar 15 19:52 start_atlas.sh
[2026-03-15 21:07:45] -rw-r--r--. 2 boinc boinc    597533 Mar 15 19:52 input.tar.gz
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc 192273142 Mar 15 21:06 HITS.pool.root.1
[2026-03-15 21:07:45] -rw-------. 1 boinc boinc    962560 Mar 15 21:07 result.tar.gz
21:07:47 (2423825): run_atlas exited; CPU time 17123.716712
21:07:47 (2423825): called boinc_finish(0)

</stderr_txt>
]]>

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