Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:54 (449179): wrapper (7.7.26015): starting
03:00:54 (449179): wrapper: running run_atlas (--nthreads 3)
[2026-03-15 03:00:54] Arguments: --nthreads 3
[2026-03-15 03:00:54] Threads: 3
[2026-03-15 03:00:54] Checking for CVMFS
[2026-03-15 03:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 03:00:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 03:00:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 03:00:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 03:00:55] 2.9.2.0 3989576 3507 81772 157297 0 50 28879040 36864000 0 130560 0 1634597 99.984 130118 14590 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 03:00:55] CVMFS is ok
[2026-03-15 03:00:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 03:00:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 03:00:55] Further information can be found at the LHC@home message board.
[2026-03-15 03:00:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 03:00:55] Checking for apptainer binary...
[2026-03-15 03:00:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 03:00:55] Running /usr/bin/apptainer --version
[2026-03-15 03:00:55] apptainer version 1.4.1-1.1
[2026-03-15 03:00:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 03:00:55] legendA269a
[2026-03-15 03:00:55] apptainer works
[2026-03-15 03:00:55] Set ATHENA_PROC_NUMBER=3
[2026-03-15 03:00:55] Set ATHENA_CORE_NUMBER=3
[2026-03-15 03:00:55] Starting ATLAS job with PandaID=7041158851
[2026-03-15 03:00:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 04:21:16]  *** The last 200 lines of the pilot log: ***
[2026-03-15 04:21:16] 2026-03-15 03:20:32,357 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 04:21:16] 2026-03-15 03:20:32,357 | INFO     | update_server=False
[2026-03-15 04:21:16] 2026-03-15 03:20:32,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 04:21:16] 2026-03-15 03:20:32,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 04:21:16] 2026-03-15 03:20:32,738 | INFO     | aborting loop
[2026-03-15 04:21:16] 2026-03-15 03:20:32,749 | INFO     | all payload control threads have been joined
[2026-03-15 04:21:16] 2026-03-15 03:20:32,806 | INFO     | all job control threads have been joined
[2026-03-15 04:21:16] 2026-03-15 03:20:33,256 | INFO     | all data control threads have been joined
[2026-03-15 04:21:16] 2026-03-15 03:20:33,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 04:21:16] 2026-03-15 03:20:33,363 | INFO     | [job] retrieve thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:33,489 | INFO     | [data] copytool_in thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:33,743 | INFO     | [job] job monitor thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:33,754 | INFO     | [payload] control thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:33,811 | INFO     | [job] control thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:33,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 04:21:16] 2026-03-15 03:20:34,018 | INFO     | [payload] failed_post thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,262 | INFO     | [data] control thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,459 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,708 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,751 | INFO     | [job] validate thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,776 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,842 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:34,887 | INFO     | [payload] validate_post thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:35,309 | INFO     | [data] copytool_out thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:35,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 04:21:16] 2026-03-15 03:20:36,316 | INFO     | [job] queue monitor thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:20:37,819 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 04:21:16] 2026-03-15 03:21:02,575 | INFO     | PID=453224 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 04:21:16] 2026-03-15 03:21:02,575 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 04:21:16] 2026-03-15 03:21:02,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 04:21:16] 2026-03-15 03:21:02,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 04:21:16] 2026-03-15 03:21:10,554 | INFO     | [monitor] cgroup control has ended
[2026-03-15 04:21:16] 2026-03-15 03:21:11,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106436659008)>', '<ExcThread(monitor, started 140105591289600)>']
[2026-03-15 04:21:16] 2026-03-15 03:21:11,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 04:21:16] 2026-03-15 03:21:11,619 | INFO     | [monitor] control thread has ended
[2026-03-15 04:21:16] 2026-03-15 03:21:16,258 | INFO     | all workflow threads have been joined
[2026-03-15 04:21:16] 2026-03-15 03:21:16,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 04:21:16] 2026-03-15 03:21:16,259 | INFO     | traces error code: 0
[2026-03-15 04:21:16] 2026-03-15 03:21:16,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 04:21:16] 2026-03-15 03:21:16,310 [wrapper] ==== pilot stdout END ====
[2026-03-15 04:21:16] 2026-03-15 03:21:16,313 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 04:21:16] 2026-03-15 03:21:16,315 [wrapper] pilotpid: 453224
[2026-03-15 04:21:16] 2026-03-15 03:21:16,318 [wrapper] Pilot exit status: 0
[2026-03-15 04:21:16] 2026-03-15 03:21:16,326 [wrapper] pandaids: 7041158851
[2026-03-15 04:21:16] 2026-03-15 03:21:16,345 [wrapper] cleanup supervisor_pilot  465566 453225
[2026-03-15 04:21:16] 2026-03-15 03:21:16,348 [wrapper] Test setup, not cleaning
[2026-03-15 04:21:16] 2026-03-15 03:21:16,350 [wrapper] apfmon messages muted
[2026-03-15 04:21:16] 2026-03-15 03:21:16,353 [wrapper] ==== wrapper stdout END ====
[2026-03-15 04:21:16] 2026-03-15 03:21:16,355 [wrapper] ==== wrapper stderr END ====
[2026-03-15 04:21:16]  *** Error codes and diagnostics ***
[2026-03-15 04:21:16]     "exeErrorCode": 0,
[2026-03-15 04:21:16]     "exeErrorDiag": "",
[2026-03-15 04:21:16]     "pilotErrorCode": 0,
[2026-03-15 04:21:16]     "pilotErrorDiag": "",
[2026-03-15 04:21:16]  *** Listing of results directory ***
[2026-03-15 04:21:16] total 618140
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc    584627 Mar  9 20:08 pilot3.tar.gz
[2026-03-15 04:21:16] -rwx------ 1 boinc boinc     36322 Mar  9 20:09 runpilot2-wrapper.sh
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc      5111 Mar  9 20:10 queuedata.json
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc       100 Mar 15 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 04:21:16] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 03:00 run_atlas
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc       105 Mar 15 03:00 job.xml
[2026-03-15 04:21:16] -rw-r--r-- 2 boinc boinc 437665277 Mar 15 03:00 EVNT.46701403._002258.pool.root.1
[2026-03-15 04:21:16] -rw-r--r-- 2 boinc boinc    597953 Mar 15 03:00 input.tar.gz
[2026-03-15 04:21:16] -rw-r--r-- 2 boinc boinc     15845 Mar 15 03:00 start_atlas.sh
[2026-03-15 04:21:16] drwxrwx--x 2 boinc boinc      4096 Mar 15 03:00 shared
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc         0 Mar 15 03:00 boinc_setup_complete
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc      6449 Mar 15 03:00 init_data.xml
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc         0 Mar 15 03:00 boinc_lockfile
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc      2571 Mar 15 03:00 pandaJob.out
[2026-03-15 04:21:16] -rw------- 1 boinc boinc   1006481 Mar 15 03:01 agis_schedconf.cvmfs.json
[2026-03-15 04:21:16] -rw------- 1 boinc boinc   1511579 Mar 15 03:01 agis_ddmendpoints.agis.ALL.json
[2026-03-15 04:21:16] -rw------- 1 boinc boinc       427 Mar 15 03:01 workernode_map.json
[2026-03-15 04:21:16] drwx------ 5 boinc boinc      4096 Mar 15 03:01 pilot3
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc       530 Mar 15 04:20 boinc_task_state.xml
[2026-03-15 04:21:16] -rw------- 1 boinc boinc 189484829 Mar 15 04:20 HITS.48955015._010278.pool.root.1
[2026-03-15 04:21:16] -rw------- 1 boinc boinc      1016 Mar 15 04:20 memory_monitor_summary.json
[2026-03-15 04:21:16] -rw------- 1 boinc boinc    252741 Mar 15 04:20 log.48955015._010278.job.log.tgz.1
[2026-03-15 04:21:16] -rw------- 1 boinc boinc      6308 Mar 15 04:20 heartbeat.json
[2026-03-15 04:21:16] -rw------- 1 boinc boinc        95 Mar 15 04:20 pilot_heartbeat.json
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc      8192 Mar 15 04:21 boinc_mmap_file
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc        27 Mar 15 04:21 wrapper_checkpoint.txt
[2026-03-15 04:21:16] -rw------- 1 boinc boinc      4747 Mar 15 04:21 pilotlog.txt
[2026-03-15 04:21:16] -rw------- 1 boinc boinc    699601 Mar 15 04:21 log.48955015._010278.job.log.1
[2026-03-15 04:21:16] -rw------- 1 boinc boinc       357 Mar 15 04:21 output.list
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc       620 Mar 15 04:21 runtime_log
[2026-03-15 04:21:16] -rw------- 1 boinc boinc    972800 Mar 15 04:21 result.tar.gz
[2026-03-15 04:21:16] -rw------- 1 boinc boinc       662 Mar 15 04:21 xc3LDmMAvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmataLDmry8Zgm.diag
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc      8921 Mar 15 04:21 runtime_log.err
[2026-03-15 04:21:16] -rw-r--r-- 1 boinc boinc      7520 Mar 15 04:21 stderr.txt
[2026-03-15 04:21:16] HITS file was successfully produced:
[2026-03-15 04:21:16] -rw------- 1 boinc boinc 189484829 Mar 15 04:20 shared/HITS.pool.root.1
[2026-03-15 04:21:16]  *** Contents of shared directory: ***
[2026-03-15 04:21:16] total 614012
[2026-03-15 04:21:16] -rw-r--r-- 2 boinc boinc 437665277 Mar 15 03:00 ATLAS.root_0
[2026-03-15 04:21:16] -rw-r--r-- 2 boinc boinc    597953 Mar 15 03:00 input.tar.gz
[2026-03-15 04:21:16] -rw-r--r-- 2 boinc boinc     15845 Mar 15 03:00 start_atlas.sh
[2026-03-15 04:21:16] -rw------- 1 boinc boinc 189484829 Mar 15 04:20 HITS.pool.root.1
[2026-03-15 04:21:16] -rw------- 1 boinc boinc    972800 Mar 15 04:21 result.tar.gz
04:21:18 (449179): run_atlas exited; CPU time 13342.479626
04:21:18 (449179): called boinc_finish(0)

</stderr_txt>
]]>

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