Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:42:26 (14094): wrapper (7.7.26015): starting
11:42:26 (14094): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 11:42:26] Arguments: --nthreads 12
[2026-03-14 11:42:26] Threads: 12
[2026-03-14 11:42:26] Checking for CVMFS
[2026-03-14 11:42:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 11:42:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 11:42:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 11:42:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 11:42:26] 2.11.2.0 2947 443350 99044 157282 3 50 17586843 20275200 1 130560 1 192770685 99.956 25143471 15689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 11:42:26] CVMFS is ok
[2026-03-14 11:42:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 11:42:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 11:42:26] Further information can be found at the LHC@home message board.
[2026-03-14 11:42:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 11:42:26] Checking for apptainer binary...
[2026-03-14 11:42:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 11:42:26] Running /usr/bin/apptainer --version
[2026-03-14 11:42:26] apptainer version 1.3.2-1.el7
[2026-03-14 11:42:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 11:42:28] c-205-18.aglt2.org
[2026-03-14 11:42:28] apptainer works
[2026-03-14 11:42:28] Set ATHENA_PROC_NUMBER=12
[2026-03-14 11:42:28] Set ATHENA_CORE_NUMBER=12
[2026-03-14 11:42:28] Starting ATLAS job with PandaID=7046561570
[2026-03-14 11:42:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:50:10]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:50:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 12:50:10]  is_altstaged=None
[2026-03-14 12:50:10]  is_tar=False
[2026-03-14 12:50:10]  lfn=log.48955010._042272.job.log.tgz.1
[2026-03-14 12:50:10]  mtime=0
[2026-03-14 12:50:10]  protocol_id=None
[2026-03-14 12:50:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 12:50:10]  replicas=None
[2026-03-14 12:50:10]  scope=mc23_13p6TeV
[2026-03-14 12:50:10]  status=None
[2026-03-14 12:50:10]  status_code=0
[2026-03-14 12:50:10]  storage_token=
[2026-03-14 12:50:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7046561570/log.48955010._042272.job.log.tgz.1
[2026-03-14 12:50:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/d4/log.48955010._042272.job.log.tgz.1
[2026-03-14 12:50:10]  workdir=None
[2026-03-14 12:50:10] ]
[2026-03-14 12:50:10] 2026-03-14 16:49:33,661 | INFO     | transferring file log.48955010._042272.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7046561570/log.48955010._042272.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 12:50:10] 2026-03-14 16:49:33,662 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7046561570/log.48955010._042272.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._042272.job
[2026-03-14 12:50:10] 2026-03-14 16:49:33,688 | INFO     | adding to output.list: log.48955010._042272.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/d4/log.48955010._042272.job.log.tg
[2026-03-14 12:50:10] 2026-03-14 16:49:33,689 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 12:50:10] 2026-03-14 16:49:33,689 | INFO     | summary of transferred files:
[2026-03-14 12:50:10] 2026-03-14 16:49:33,689 | INFO     |  -- lfn=log.48955010._042272.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 12:50:10] 2026-03-14 16:49:33,690 | INFO     | stage-out finished correctly
[2026-03-14 12:50:10] 2026-03-14 16:49:35,078 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 12:50:10] 2026-03-14 16:49:35,240 | INFO     | time since job start (4007s) is within the limit (345600.0s)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,246 | INFO     | time since job start (4009s) is within the limit (345600.0s)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,820 | INFO     | job 7046561570 has state=finished
[2026-03-14 12:50:10] 2026-03-14 16:49:37,820 | INFO     | preparing for final server update for job 7046561570 in state='finished'
[2026-03-14 12:50:10] 2026-03-14 16:49:37,828 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7046561570/jobReport.json
[2026-03-14 12:50:10] 2026-03-14 16:49:37,831 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 12:50:10] 2026-03-14 16:49:37,832 | INFO     | this job has now completed (state=finished)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,832 | INFO     | log transfer has been attempted: DONE
[2026-03-14 12:50:10] 2026-03-14 16:49:37,832 | INFO     | job 7046561570 has finished - writing final server update
[2026-03-14 12:50:10] 2026-03-14 16:49:37,833 | INFO     | total number of processed events: 400 (read)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,835 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046561570/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,836 | INFO     | extracted standard info from prmon json
[2026-03-14 12:50:10] 2026-03-14 16:49:37,836 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 12:50:10] 2026-03-14 16:49:37,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 12:50:10] 2026-03-14 16:49:37,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 12:50:10] 2026-03-14 16:49:37,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 12:50:10] 2026-03-14 16:49:37,839 | INFO     | fitting pss+swap vs Time
[2026-03-14 12:50:10] 2026-03-14 16:49:37,839 | INFO     | sum of square deviations: 63666310.0
[2026-03-14 12:50:10] 2026-03-14 16:49:37,839 | INFO     | sum of deviations: -5844260184.000001
[2026-03-14 12:50:10] 2026-03-14 16:49:37,840 | INFO     | mean x: 1773505066.0
[2026-03-14 12:50:10] 2026-03-14 16:49:37,840 | INFO     | mean y: 2816031.0677966103
[2026-03-14 12:50:10] 2026-03-14 16:49:37,840 | INFO     | intersect: 162802027157.73895
[2026-03-14 12:50:10] 2026-03-14 16:49:37,840 | INFO     | chi2: 0.08608458101221271
[2026-03-14 12:50:10] 2026-03-14 16:49:37,840 | INFO     | current memory leak: -91.80 B/s (using 59 data points, chi2=0.09)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,840 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | ..............................
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . Timing measurements:
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . get job = 0 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . initial setup = 7 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . payload setup = 7 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . stage-in = 0 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . payload execution = 3982 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . stage-out = 0 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | . log creation = 0 s
[2026-03-14 12:50:10] 2026-03-14 16:49:37,841 | INFO     | ..............................
[2026-03-14 12:50:10] 2026-03-14 16:49:38,231 | INFO     | 
[2026-03-14 12:50:10] 2026-03-14 16:49:38,232 | INFO     | job summary report
[2026-03-14 12:50:10] 2026-03-14 16:49:38,232 | INFO     | --------------------------------------------------
[2026-03-14 12:50:10] 2026-03-14 16:49:38,232 | INFO     | PanDA job id: 7046561570
[2026-03-14 12:50:10] 2026-03-14 16:49:38,232 | INFO     | task id: 48955010
[2026-03-14 12:50:10] 2026-03-14 16:49:38,233 | INFO     | errors: (none)
[2026-03-14 12:50:10] 2026-03-14 16:49:38,233 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 12:50:10] 2026-03-14 16:49:38,233 | INFO     | pilot state: finished 
[2026-03-14 12:50:10] 2026-03-14 16:49:38,233 | INFO     | transexitcode: 0
[2026-03-14 12:50:10] 2026-03-14 16:49:38,233 | INFO     | exeerrorcode: 0
[2026-03-14 12:50:10] 2026-03-14 16:49:38,233 | INFO     | exeerrordiag: 
[2026-03-14 12:50:10] 2026-03-14 16:49:38,234 | INFO     | exitcode: 0
[2026-03-14 12:50:10] 2026-03-14 16:49:38,234 | INFO     | exitmsg: OK
[2026-03-14 12:50:10] 2026-03-14 16:49:38,234 | INFO     | cpuconsumptiontime: 42885 s
[2026-03-14 12:50:10] 2026-03-14 16:49:38,234 | INFO     | nevents: 400
[2026-03-14 12:50:10] 2026-03-14 16:49:38,234 | INFO     | neventsw: 0
[2026-03-14 12:50:10] 2026-03-14 16:49:38,234 | INFO     | pid: 22227
[2026-03-14 12:50:10] 2026-03-14 16:49:38,235 | INFO     | pgrp: 22227
[2026-03-14 12:50:10] 2026-03-14 16:49:38,235 | INFO     | corecount: 12
[2026-03-14 12:50:10] 2026-03-14 16:49:38,235 | INFO     | event service: False
[2026-03-14 12:50:10] 2026-03-14 16:49:38,235 | INFO     | sizes: {0: 2280181, 11: 2280181, 3993: 2306012, 3994: 2315010, 3995: 2315066, 3998: 2315260}
[2026-03-14 12:50:10] 2026-03-14 16:49:38,235 | INFO     | --------------------------------------------------
[2026-03-14 12:50:10] 2026-03-14 16:49:38,235 | INFO     | 
[2026-03-14 12:50:10] 2026-03-14 16:49:38,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 12:50:10] 2026-03-14 16:49:38,265 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,268 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 12:50:10] 2026-03-14 16:49:38,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,269 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 12:50:10] 2026-03-14 16:49:38,269 | INFO     | job 7046561570 has completed (purged errors)
[2026-03-14 12:50:10] 2026-03-14 16:49:38,269 | INFO     | overall cleanup function is called
[2026-03-14 12:50:10] 2026-03-14 16:49:39,000 | WARNING  | process 22227 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 12:50:10] 2026-03-14 16:49:39,071 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:50:10] 2026-03-14 16:49:39,155 | INFO     | number of running child processes to parent process 22227: 1
[2026-03-14 12:50:10] 2026-03-14 16:49:39,155 | INFO     | maximum number of monitored processes: 6
[2026-03-14 12:50:10] 2026-03-14 16:49:39,155 | INFO     | aborting job monitoring since job object (job id=7046561570) has expired
[2026-03-14 12:50:10] 2026-03-14 16:49:39,277 | INFO     | --- collectZombieJob: --- 10, [22227]
[2026-03-14 12:50:10] 2026-03-14 16:49:39,277 | INFO     | zombie collector waiting for pid 22227
[2026-03-14 12:50:10] 2026-03-14 16:49:39,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 12:50:10] 2026-03-14 16:49:39,278 | INFO     | collected zombie processes
[2026-03-14 12:50:10] 2026-03-14 16:49:39,278 | INFO     | will attempt to kill all subprocesses of pid=22227
[2026-03-14 12:50:10] 2026-03-14 16:49:39,363 | INFO     | process IDs to be killed: [22227] (in reverse order)
[2026-03-14 12:50:10] 2026-03-14 16:49:39,415 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 12:50:10] 2026-03-14 16:49:39,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 12:50:10] 2026-03-14 16:49:39,419 | INFO     | did not find any defunct processes belonging to 22227
[2026-03-14 12:50:10] 2026-03-14 16:49:39,421 | INFO     | did not find any defunct processes belonging to 22227
[2026-03-14 12:50:10] 2026-03-14 16:49:39,421 | INFO     | ready for new job
[2026-03-14 12:50:10] 2026-03-14 16:49:39,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 12:50:10] 2026-03-14 16:49:39,422 | INFO     | **************************************
[2026-03-14 12:50:10] 2026-03-14 16:49:39,422 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 12:50:10] 2026-03-14 16:49:39,422 | INFO     | **************************************
[2026-03-14 12:50:10] 2026-03-14 16:49:39,423 | INFO     | 
[2026-03-14 12:50:10] 2026-03-14 16:49:39,423 | INFO     | architecture information:
[2026-03-14 12:50:10] 2026-03-14 16:49:39,424 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:50:10] 2026-03-14 16:49:39,439 | INFO     | cat /etc/os-release:
[2026-03-14 12:50:10] NAME="CentOS Linux"
[2026-03-14 12:50:10] VERSION="7 (Core)"
[2026-03-14 12:50:10] ID="centos"
[2026-03-14 12:50:10] ID_LIKE="rhel fedora"
[2026-03-14 12:50:10] VERSION_ID="7"
[2026-03-14 12:50:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:50:10] ANSI_COLOR="0;31"
[2026-03-14 12:50:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:50:10] HOME_URL="https://www.centos.org/"
[2026-03-14 12:50:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:50:10] 
[2026-03-14 12:50:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:50:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:50:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:50:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:50:10] 
[2026-03-14 12:50:10] 2026-03-14 16:49:39,440 | INFO     | **************************************
[2026-03-14 12:50:10] 2026-03-14 16:49:39,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 12:50:10] 2026-03-14 16:49:39,960 | INFO     | sufficient remaining disk space (28905046016 B)
[2026-03-14 12:50:10] 2026-03-14 16:49:39,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:50:10] 2026-03-14 16:49:39,961 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:50:10] 2026-03-14 16:49:39,961 | INFO     | update_server=False
[2026-03-14 12:50:10] 2026-03-14 16:49:39,961 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:50:10] 2026-03-14 16:49:39,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:50:10] 2026-03-14 16:49:39,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:50:10] 2026-03-14 16:49:39,962 | INFO     | will abort loop
[2026-03-14 12:50:10] 2026-03-14 16:49:40,148 | INFO     | all job control threads have been joined
[2026-03-14 12:50:10] 2026-03-14 16:49:40,534 | INFO     | all data control threads have been joined
[2026-03-14 12:50:10] 2026-03-14 16:49:40,967 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:40,967 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:40,994 | INFO     | all payload control threads have been joined
[2026-03-14 12:50:10] 2026-03-14 16:49:41,136 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,153 | INFO     | [job] control thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:50:10] 2026-03-14 16:49:41,183 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,364 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,409 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,540 | INFO     | [data] control thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,940 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,964 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:41,999 | INFO     | [payload] control thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:42,291 | INFO     | [job] validate thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:42,413 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:42,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:50:10] 2026-03-14 16:49:43,936 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:45,172 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:50,031 | INFO     | job.realtimelogging is not enabled
[2026-03-14 12:50:10] 2026-03-14 16:49:51,037 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:50:10] 2026-03-14 16:49:54,177 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:50:10] 2026-03-14 16:49:54,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953094022976)>', '<ExcThread(monitor, started 139951911991040)>']
[2026-03-14 12:50:10] 2026-03-14 16:49:59,265 | INFO     | all workflow threads have been joined
[2026-03-14 12:50:10] 2026-03-14 16:49:59,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:50:10] 2026-03-14 16:49:59,266 | INFO     | traces error code: 0
[2026-03-14 12:50:10] 2026-03-14 16:49:59,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:50:10] 2026-03-14 16:50:10,449 | INFO     | PID=17773 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 12:50:10] 2026-03-14 16:50:10,449 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:50:10] 2026-03-14 16:50:10,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:50:10] 2026-03-14 16:50:10,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:50:10] 2026-03-14 16:50:10,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:50:10] 2026-03-14 16:50:10,450 | INFO     | [monitor] control thread has ended
[2026-03-14 12:50:10] 2026-03-14 16:50:10,555 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:50:10] 2026-03-14 16:50:10,559 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:50:10] 2026-03-14 16:50:10,562 [wrapper] pilotpid: 17773
[2026-03-14 12:50:10] 2026-03-14 16:50:10,566 [wrapper] Pilot exit status: 0
[2026-03-14 12:50:10] 2026-03-14 16:50:10,580 [wrapper] pandaids: 7046561570
[2026-03-14 12:50:10] 2026-03-14 16:50:10,617 [wrapper] cleanup supervisor_pilot  9227 17774
[2026-03-14 12:50:10] 2026-03-14 16:50:10,621 [wrapper] Test setup, not cleaning
[2026-03-14 12:50:10] 2026-03-14 16:50:10,624 [wrapper] apfmon messages muted
[2026-03-14 12:50:10] 2026-03-14 16:50:10,628 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:50:10] 2026-03-14 16:50:10,632 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:50:10]  *** Error codes and diagnostics ***
[2026-03-14 12:50:10]     "exeErrorCode": 0,
[2026-03-14 12:50:10]     "exeErrorDiag": "",
[2026-03-14 12:50:10]     "pilotErrorCode": 0,
[2026-03-14 12:50:10]     "pilotErrorDiag": "",
[2026-03-14 12:50:10]  *** Listing of results directory ***
[2026-03-14 12:50:10] total 615660
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 05:56 pilot3.tar.gz
[2026-03-14 12:50:10] -rwx------ 1 boincer umatlas     36322 Mar 14 05:58 runpilot2-wrapper.sh
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 06:01 queuedata.json
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas       100 Mar 14 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:50:10] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 11:42 run_atlas
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas       105 Mar 14 11:42 job.xml
[2026-03-14 12:50:10] -rw-r--r-- 2 boincer umatlas 438245152 Mar 14 11:42 EVNT.46701403._001866.pool.root.1
[2026-03-14 12:50:10] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 11:42 start_atlas.sh
[2026-03-14 12:50:10] drwxrwx--x 2 boincer umatlas      4096 Mar 14 11:42 shared
[2026-03-14 12:50:10] -rw-r--r-- 2 boincer umatlas    597527 Mar 14 11:42 input.tar.gz
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas         0 Mar 14 11:42 boinc_lockfile
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas      2564 Mar 14 11:42 pandaJob.out
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas        57 Mar 14 11:42 setup.sh.local
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas   1004579 Mar 14 11:42 agis_schedconf.cvmfs.json
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas   1511579 Mar 14 11:42 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas       434 Mar 14 11:42 workernode_map.json
[2026-03-14 12:50:10] drwx------ 5 boincer umatlas      4096 Mar 14 11:42 pilot3
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 12:46 init_data.xml
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas       530 Mar 14 12:49 boinc_task_state.xml
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas 186281324 Mar 14 12:49 HITS.48955010._042272.pool.root.1
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas      1058 Mar 14 12:49 memory_monitor_summary.json
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas    399147 Mar 14 12:49 log.48955010._042272.job.log.tgz.1
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas        95 Mar 14 12:49 pilot_heartbeat.json
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas      6415 Mar 14 12:49 heartbeat.json
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas        27 Mar 14 12:50 wrapper_checkpoint.txt
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 12:50 boinc_mmap_file
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas       745 Mar 14 12:50 pilotlog.txt
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas    590024 Mar 14 12:50 log.48955010._042272.job.log.1
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas       357 Mar 14 12:50 output.list
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas       620 Mar 14 12:50 runtime_log
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas   1003520 Mar 14 12:50 result.tar.gz
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 12:50 runtime_log.err
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas       659 Mar 14 12:50 gCZKDmJwaL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm92pLDm8eBCVn.diag
[2026-03-14 12:50:10] -rw-r--r-- 1 boincer umatlas     21417 Mar 14 12:50 stderr.txt
[2026-03-14 12:50:10] HITS file was successfully produced:
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas 186281324 Mar 14 12:49 shared/HITS.pool.root.1
[2026-03-14 12:50:10]  *** Contents of shared directory: ***
[2026-03-14 12:50:10] total 611476
[2026-03-14 12:50:10] -rw-r--r-- 2 boincer umatlas 438245152 Mar 14 11:42 ATLAS.root_0
[2026-03-14 12:50:10] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 11:42 start_atlas.sh
[2026-03-14 12:50:10] -rw-r--r-- 2 boincer umatlas    597527 Mar 14 11:42 input.tar.gz
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas 186281324 Mar 14 12:49 HITS.pool.root.1
[2026-03-14 12:50:10] -rw------- 1 boincer umatlas   1003520 Mar 14 12:50 result.tar.gz
12:50:12 (14094): run_atlas exited; CPU time 42865.378280
12:50:12 (14094): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN