Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:31:03 (2032194): wrapper (7.7.26015): starting
22:31:03 (2032194): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 22:31:03] Arguments: --nthreads 4
[2026-03-15 22:31:03] Threads: 4
[2026-03-15 22:31:03] Checking for CVMFS
[2026-03-15 22:31:03] No cvmfs_config command found, will try listing directly
[2026-03-15 22:31:03] CVMFS is ok
[2026-03-15 22:31:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 22:31:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 22:31:03] Further information can be found at the LHC@home message board.
[2026-03-15 22:31:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 22:31:03] Checking for apptainer binary...
[2026-03-15 22:31:03] which: no apptainer in ((null))
[2026-03-15 22:31:03] apptainer is not installed, using version from CVMFS
[2026-03-15 22:31:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 22:31:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-15 22:31:03] apptainer works
[2026-03-15 22:31:03] Set ATHENA_PROC_NUMBER=4
[2026-03-15 22:31:03] Set ATHENA_CORE_NUMBER=4
[2026-03-15 22:31:03] Starting ATLAS job with PandaID=7046922487
[2026-03-15 22:31:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 23:38:39]  *** The last 200 lines of the pilot log: ***
[2026-03-15 23:38:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/ed/log.48955010._045832.job.log.tgz.1
[2026-03-15 23:38:39]  workdir=None
[2026-03-15 23:38:39] ]
[2026-03-15 23:38:39] 2026-03-15 22:38:01,182 | INFO     | transferring file log.48955010._045832.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/log.48955010._045832.job.log.tgz.1 to /var/lib/
[2026-03-15 23:38:39] 2026-03-15 22:38:01,183 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/log.48955010._045832.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-15 23:38:39] 2026-03-15 22:38:01,200 | INFO     | adding to output.list: log.48955010._045832.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/ed/log.48955010._045832.job.log.tg
[2026-03-15 23:38:39] 2026-03-15 22:38:01,201 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 23:38:39] 2026-03-15 22:38:01,201 | INFO     | summary of transferred files:
[2026-03-15 23:38:39] 2026-03-15 22:38:01,201 | INFO     |  -- lfn=log.48955010._045832.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 23:38:39] 2026-03-15 22:38:01,201 | INFO     | stage-out finished correctly
[2026-03-15 23:38:39] 2026-03-15 22:38:01,705 | INFO     | time since job start (4007s) is within the limit (345600.0s)
[2026-03-15 23:38:39] 2026-03-15 22:38:03,710 | INFO     | time since job start (4009s) is within the limit (345600.0s)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,489 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 23:38:39] 2026-03-15 22:38:04,592 | WARNING  | process 2042665 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 23:38:39] 2026-03-15 22:38:04,593 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,593 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,593 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 23:38:39] 2026-03-15 22:38:04,593 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 23:38:39] 2026-03-15 22:38:04,594 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2118605 B
[2026-03-15 23:38:39] 2026-03-15 22:38:04,594 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15616 B
[2026-03-15 23:38:39] 2026-03-15 22:38:04,594 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-15 23:38:39] 2026-03-15 22:38:04,611 | INFO     | sufficient remaining disk space (204675743744 B)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,611 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,612 | INFO     | size of work directory /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487: 2413205 B (within 5033164800 B limit)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,612 | INFO     | pfn file=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/HITS.48955010._045832.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,612 | INFO     | total size of present files: 0 B (workdir size: 2413205 B)
[2026-03-15 23:38:39] 2026-03-15 22:38:04,612 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/HITS.48955010._045832.pool.root.1 since it does not exist
[2026-03-15 23:38:39] 2026-03-15 22:38:05,026 | INFO     | number of running child processes to parent process 2042665: 1
[2026-03-15 23:38:39] 2026-03-15 22:38:05,026 | INFO     | maximum number of monitored processes: 6
[2026-03-15 23:38:39] 2026-03-15 22:38:05,716 | INFO     | time since job start (4011s) is within the limit (345600.0s)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,246 | INFO     | job 7046922487 has state=finished
[2026-03-15 23:38:39] 2026-03-15 22:38:06,246 | INFO     | preparing for final server update for job 7046922487 in state='finished'
[2026-03-15 23:38:39] 2026-03-15 22:38:06,246 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/jobReport.json
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | INFO     | this job has now completed (state=finished)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | INFO     | log transfer has been attempted: DONE
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | INFO     | job 7046922487 has finished - writing final server update
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3913135/.job.ad'
[2026-03-15 23:38:39] 2026-03-15 22:38:06,248 | INFO     | total number of processed events: 400 (read)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,266 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7046922487/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,267 | INFO     | extracted standard info from prmon json
[2026-03-15 23:38:39] 2026-03-15 22:38:06,267 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 23:38:39] 2026-03-15 22:38:06,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 23:38:39] 2026-03-15 22:38:06,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 23:38:39] 2026-03-15 22:38:06,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 23:38:39] 2026-03-15 22:38:06,268 | INFO     | fitting pss+swap vs Time
[2026-03-15 23:38:39] 2026-03-15 22:38:06,268 | INFO     | sum of square deviations: 63666310.0
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | sum of deviations: 1830854.0000000093
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | mean x: 1773612369.0
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | mean y: 2331119.559322034
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | intersect: -48672704.916026734
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | chi2: 0.00033953371561694145
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | current memory leak: 0.03 B/s (using 59 data points, chi2=0.00)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | could have reported an average CPU frequency of 3622 MHz (6 samples)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | ..............................
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . Timing measurements:
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . get job = 0 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . initial setup = 4 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . payload setup = 5 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . stage-in = 0 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . payload execution = 3986 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . stage-out = 0 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | . log creation = 0 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,269 | INFO     | ..............................
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | 
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | job summary report
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | --------------------------------------------------
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | PanDA job id: 7046922487
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | task id: 48955010
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | errors: (none)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | pilot state: finished 
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | transexitcode: 0
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | exeerrorcode: 0
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | exeerrordiag: 
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | exitcode: 0
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | exitmsg: OK
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | cpuconsumptiontime: 15231 s
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | nevents: 400
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | neventsw: 0
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | pid: 2042665
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | pgrp: 2042665
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | corecount: 4
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | event service: False
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | sizes: {0: 2279703, 1: 2280220, 11: 2280220, 3995: 2306130, 3996: 2315152, 3999: 2315208, 4001: 2315558}
[2026-03-15 23:38:39] 2026-03-15 22:38:06,500 | INFO     | --------------------------------------------------
[2026-03-15 23:38:39] 2026-03-15 22:38:06,501 | INFO     | 
[2026-03-15 23:38:39] 2026-03-15 22:38:06,501 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-15 23:38:39] 2026-03-15 22:38:06,518 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 23:38:39] 2026-03-15 22:38:06,519 | INFO     | job 7046922487 has completed (purged errors)
[2026-03-15 23:38:39] 2026-03-15 22:38:06,520 | INFO     | overall cleanup function is called
[2026-03-15 23:38:39] 2026-03-15 22:38:07,526 | INFO     | --- collectZombieJob: --- 10, [2042665]
[2026-03-15 23:38:39] 2026-03-15 22:38:07,527 | INFO     | zombie collector waiting for pid 2042665
[2026-03-15 23:38:39] 2026-03-15 22:38:07,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 23:38:39] 2026-03-15 22:38:07,527 | INFO     | collected zombie processes
[2026-03-15 23:38:39] 2026-03-15 22:38:07,527 | INFO     | will attempt to kill all subprocesses of pid=2042665
[2026-03-15 23:38:39] 2026-03-15 22:38:07,943 | INFO     | process IDs to be killed: [2042665] (in reverse order)
[2026-03-15 23:38:39] 2026-03-15 22:38:08,137 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 23:38:39] 2026-03-15 22:38:08,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 23:38:39] 2026-03-15 22:38:08,165 | INFO     | did not find any defunct processes belonging to 2042665
[2026-03-15 23:38:39] 2026-03-15 22:38:08,193 | INFO     | did not find any defunct processes belonging to 2042665
[2026-03-15 23:38:39] 2026-03-15 22:38:08,193 | INFO     | ready for new job
[2026-03-15 23:38:39] 2026-03-15 22:38:08,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 23:38:39] 2026-03-15 22:38:08,194 | INFO     | **************************************
[2026-03-15 23:38:39] 2026-03-15 22:38:08,194 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 23:38:39] 2026-03-15 22:38:08,194 | INFO     | **************************************
[2026-03-15 23:38:39] 2026-03-15 22:38:08,194 | INFO     | 
[2026-03-15 23:38:39] 2026-03-15 22:38:08,201 | INFO     | architecture information:
[2026-03-15 23:38:39] 2026-03-15 22:38:08,201 | INFO     | executing command: cat /etc/os-release
[2026-03-15 23:38:39] 2026-03-15 22:38:08,213 | INFO     | cat /etc/os-release:
[2026-03-15 23:38:39] NAME="CentOS Linux"
[2026-03-15 23:38:39] VERSION="7 (Core)"
[2026-03-15 23:38:39] ID="centos"
[2026-03-15 23:38:39] ID_LIKE="rhel fedora"
[2026-03-15 23:38:39] VERSION_ID="7"
[2026-03-15 23:38:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 23:38:39] ANSI_COLOR="0;31"
[2026-03-15 23:38:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 23:38:39] HOME_URL="https://www.centos.org/"
[2026-03-15 23:38:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 23:38:39] 
[2026-03-15 23:38:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 23:38:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 23:38:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 23:38:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 23:38:39] 
[2026-03-15 23:38:39] 2026-03-15 22:38:08,213 | INFO     | **************************************
[2026-03-15 23:38:39] 2026-03-15 22:38:08,716 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-15 23:38:39] 2026-03-15 22:38:08,732 | INFO     | sufficient remaining disk space (204452397056 B)
[2026-03-15 23:38:39] 2026-03-15 22:38:08,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 23:38:39] 2026-03-15 22:38:08,733 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 23:38:39] 2026-03-15 22:38:08,733 | INFO     | update_server=False
[2026-03-15 23:38:39] 2026-03-15 22:38:08,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 23:38:39] 2026-03-15 22:38:08,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:38:39] 2026-03-15 22:38:08,733 | INFO     | aborting loop
[2026-03-15 23:38:39] 2026-03-15 22:38:08,912 | INFO     | all data control threads have been joined
[2026-03-15 23:38:39] 2026-03-15 22:38:09,029 | INFO     | all payload control threads have been joined
[2026-03-15 23:38:39] 2026-03-15 22:38:09,130 | INFO     | all job control threads have been joined
[2026-03-15 23:38:39] 2026-03-15 22:38:09,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 23:38:39] 2026-03-15 22:38:09,738 | INFO     | [job] retrieve thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:09,738 | INFO     | [job] job monitor thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:09,779 | INFO     | [payload] validate_post thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:09,918 | INFO     | [data] control thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,034 | INFO     | [payload] control thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,134 | INFO     | [job] control thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,503 | INFO     | [job] validate thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 23:38:39] 2026-03-15 22:38:10,629 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,645 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,730 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,751 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:10,946 | INFO     | [payload] failed_post thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:11,018 | INFO     | [data] copytool_in thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:11,264 | INFO     | [data] copytool_out thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:11,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:38:39] 2026-03-15 22:38:12,336 | INFO     | [job] queue monitor thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:14,545 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 23:38:39] 2026-03-15 22:38:20,410 | INFO     | [monitor] cgroup control has ended
[2026-03-15 23:38:39] 2026-03-15 22:38:20,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23300412430144)>', '<ExcThread(monitor, started 23300173739776)>']
[2026-03-15 23:38:39] 2026-03-15 22:38:25,455 | INFO     | all workflow threads have been joined
[2026-03-15 23:38:39] 2026-03-15 22:38:25,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 23:38:39] 2026-03-15 22:38:25,456 | INFO     | traces error code: 0
[2026-03-15 23:38:39] 2026-03-15 22:38:25,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 23:38:39] 2026-03-15 22:38:39,288 | INFO     | PID=2036817 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 23:38:39] 2026-03-15 22:38:39,289 | INFO     | .. there are 38 such processes running
[2026-03-15 23:38:39] 2026-03-15 22:38:39,289 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 23:38:39] 2026-03-15 22:38:39,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 23:38:39] 2026-03-15 22:38:39,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 23:38:39] 2026-03-15 22:38:39,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 23:38:39] 2026-03-15 22:38:39,289 | INFO     | [monitor] control thread has ended
[2026-03-15 23:38:39] 2026-03-15 22:38:39,403 [wrapper] ==== pilot stdout END ====
[2026-03-15 23:38:39] 2026-03-15 22:38:39,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 23:38:39] 2026-03-15 22:38:39,408 [wrapper] pilotpid: 2036817
[2026-03-15 23:38:39] 2026-03-15 22:38:39,409 [wrapper] Pilot exit status: 0
[2026-03-15 23:38:39] 2026-03-15 22:38:39,416 [wrapper] pandaids: 7046922487
[2026-03-15 23:38:39] 2026-03-15 22:38:39,532 [wrapper] cleanup supervisor_pilot 2523885 2036818
[2026-03-15 23:38:39] 2026-03-15 22:38:39,535 [wrapper] Test setup, not cleaning
[2026-03-15 23:38:39] 2026-03-15 22:38:39,537 [wrapper] apfmon messages muted
[2026-03-15 23:38:39] 2026-03-15 22:38:39,540 [wrapper] ==== wrapper stdout END ====
[2026-03-15 23:38:39] 2026-03-15 22:38:39,542 [wrapper] ==== wrapper stderr END ====
[2026-03-15 23:38:39]  *** Error codes and diagnostics ***
[2026-03-15 23:38:39]     "exeErrorCode": 0,
[2026-03-15 23:38:39]     "exeErrorDiag": "",
[2026-03-15 23:38:39]     "pilotErrorCode": 0,
[2026-03-15 23:38:39]     "pilotErrorDiag": "",
[2026-03-15 23:38:39]  *** Listing of results directory ***
[2026-03-15 23:38:39] total 610988
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 16:02 pilot3.tar.gz
[2026-03-15 23:38:39] -rwx------. 1 boinc boinc     36322 Mar 14 16:05 runpilot2-wrapper.sh
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 16:10 queuedata.json
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc       100 Mar 15 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 23:38:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 22:30 run_atlas
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc       105 Mar 15 22:30 job.xml
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc      6710 Mar 15 22:31 init_data.xml
[2026-03-15 23:38:39] -rw-r--r--. 2 boinc boinc 446018894 Mar 15 22:31 EVNT.46701403._001939.pool.root.1
[2026-03-15 23:38:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 22:31 start_atlas.sh
[2026-03-15 23:38:39] drwxrwx--x. 2 boinc boinc      4096 Mar 15 22:31 shared
[2026-03-15 23:38:39] -rw-r--r--. 2 boinc boinc    597538 Mar 15 22:31 input.tar.gz
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc         0 Mar 15 22:31 boinc_lockfile
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc      2564 Mar 15 22:31 pandaJob.out
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc   1006457 Mar 15 22:31 agis_schedconf.cvmfs.json
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc   1511579 Mar 15 22:31 agis_ddmendpoints.agis.ALL.json
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc       445 Mar 15 22:31 workernode_map.json
[2026-03-15 23:38:39] drwx------. 5 boinc boinc      4096 Mar 15 22:31 pilot3
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc 173995784 Mar 15 23:37 HITS.48955010._045832.pool.root.1
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc        95 Mar 15 23:37 pilot_heartbeat.json
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc      1042 Mar 15 23:37 memory_monitor_summary.json
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc    249500 Mar 15 23:38 log.48955010._045832.job.log.tgz.1
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc       530 Mar 15 23:38 boinc_task_state.xml
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc      6353 Mar 15 23:38 heartbeat.json
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc      8192 Mar 15 23:38 boinc_mmap_file
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc        27 Mar 15 23:38 wrapper_checkpoint.txt
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc       823 Mar 15 23:38 pilotlog.txt
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc    600746 Mar 15 23:38 log.48955010._045832.job.log.1
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc       357 Mar 15 23:38 output.list
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc       620 Mar 15 23:38 runtime_log
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc    870400 Mar 15 23:38 result.tar.gz
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc      9221 Mar 15 23:38 runtime_log.err
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc       662 Mar 15 23:38 Nc9MDmujfL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLoqLDmJy8D4m.diag
[2026-03-15 23:38:39] -rw-r--r--. 1 boinc boinc     22558 Mar 15 23:38 stderr.txt
[2026-03-15 23:38:39] HITS file was successfully produced:
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc 173995784 Mar 15 23:37 shared/HITS.pool.root.1
[2026-03-15 23:38:39]  *** Contents of shared directory: ***
[2026-03-15 23:38:39] total 606948
[2026-03-15 23:38:39] -rw-r--r--. 2 boinc boinc 446018894 Mar 15 22:31 ATLAS.root_0
[2026-03-15 23:38:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 22:31 start_atlas.sh
[2026-03-15 23:38:39] -rw-r--r--. 2 boinc boinc    597538 Mar 15 22:31 input.tar.gz
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc 173995784 Mar 15 23:37 HITS.pool.root.1
[2026-03-15 23:38:39] -rw-------. 1 boinc boinc    870400 Mar 15 23:38 result.tar.gz
23:38:40 (2032194): run_atlas exited; CPU time 15398.661063
23:38:40 (2032194): called boinc_finish(0)

</stderr_txt>
]]>

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