Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:11:02 (29908): wrapper (7.7.26015): starting
04:11:02 (29908): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 04:11:02] Arguments: --nthreads 8
[2026-03-15 04:11:02] Threads: 8
[2026-03-15 04:11:02] Checking for CVMFS
[2026-03-15 04:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 04:11:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 04:11:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 04:11:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 04:11:06] 2.11.2.0 6904 128459 131876 157299 2 53 16992187 25165824 4788 130560 164 43884354 99.831 30705091 1043 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 04:11:06] CVMFS is ok
[2026-03-15 04:11:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 04:11:06] Checking for apptainer binary...
[2026-03-15 04:11:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 04:11:06] Running /usr/bin/apptainer --version
[2026-03-15 04:11:06] apptainer version 1.3.2-1.el7
[2026-03-15 04:11:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 04:11:20] cg-vwn474.simple-grid.lan
[2026-03-15 04:11:20] apptainer works
[2026-03-15 04:11:20] Set ATHENA_PROC_NUMBER=8
[2026-03-15 04:11:20] Set ATHENA_CORE_NUMBER=8
[2026-03-15 04:11:20] Starting ATLAS job with PandaID=7046918976
[2026-03-15 04:11:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 07:54:26]  *** The last 200 lines of the pilot log: ***
[2026-03-15 07:54:26] 2026-03-15 06:53:25,726 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7046918976/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,727 | INFO     | extracted standard info from prmon json
[2026-03-15 07:54:26] 2026-03-15 06:53:25,727 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 07:54:26] 2026-03-15 06:53:25,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 07:54:26] 2026-03-15 06:53:25,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 07:54:26] 2026-03-15 06:53:25,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 07:54:26] 2026-03-15 06:53:25,732 | INFO     | fitting pss+swap vs Time
[2026-03-15 07:54:26] 2026-03-15 06:53:25,732 | INFO     | sum of square deviations: 2871616632.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,734 | INFO     | sum of deviations: 42675839699.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,734 | INFO     | mean x: 1773551187.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,734 | INFO     | mean y: 2461478.9095238093
[2026-03-15 07:54:26] 2026-03-15 06:53:25,734 | INFO     | intersect: -26354742794.111717
[2026-03-15 07:54:26] 2026-03-15 06:53:25,735 | INFO     | chi2: 7.233401429946353
[2026-03-15 07:54:26] 2026-03-15 06:53:25,735 | INFO     | sum of square deviations: 2671343110.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,737 | INFO     | sum of deviations: 55818502742.000046
[2026-03-15 07:54:26] 2026-03-15 06:53:25,737 | INFO     | mean x: 1773551035.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,737 | INFO     | mean y: 2471283.2780487803
[2026-03-15 07:54:26] 2026-03-15 06:53:25,737 | INFO     | intersect: -37056401064.35704
[2026-03-15 07:54:26] 2026-03-15 06:53:25,737 | INFO     | chi2: 6.538906039798475
[2026-03-15 07:54:26] 2026-03-15 06:53:25,738 | INFO     | current chi2=6.538906039798475 (change=9.601228369168902 %)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,738 | INFO     | right removable region: 204
[2026-03-15 07:54:26] 2026-03-15 06:53:25,738 | INFO     | sum of square deviations: 2671343110.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,740 | INFO     | sum of deviations: -29309205335.999992
[2026-03-15 07:54:26] 2026-03-15 06:53:25,740 | INFO     | mean x: 1773551340.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,740 | INFO     | mean y: 2516242.1902439026
[2026-03-15 07:54:26] 2026-03-15 06:53:25,740 | INFO     | intersect: 19461409487.09353
[2026-03-15 07:54:26] 2026-03-15 06:53:25,740 | INFO     | chi2: 2.451831482583995
[2026-03-15 07:54:26] 2026-03-15 06:53:25,741 | INFO     | current chi2=2.451831482583995 (change=66.10403132842333 %)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,741 | INFO     | sum of square deviations: 2480604650.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,743 | INFO     | sum of deviations: -64890979031.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,743 | INFO     | mean x: 1773551492.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,743 | INFO     | mean y: 2544485.115
[2026-03-15 07:54:26] 2026-03-15 06:53:25,743 | INFO     | intersect: 46397479974.37284
[2026-03-15 07:54:26] 2026-03-15 06:53:25,743 | INFO     | chi2: 1.006990443965977
[2026-03-15 07:54:26] 2026-03-15 06:53:25,744 | INFO     | current chi2=1.006990443965977 (change=58.9290515633356 %)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,744 | INFO     | sum of square deviations: 2299168690.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,745 | INFO     | sum of deviations: -63623648917.999985
[2026-03-15 07:54:26] 2026-03-15 06:53:25,746 | INFO     | mean x: 1773551645.0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,746 | INFO     | mean y: 2543374.682051282
[2026-03-15 07:54:26] 2026-03-15 06:53:25,746 | INFO     | intersect: 49081076711.62539
[2026-03-15 07:54:26] 2026-03-15 06:53:25,746 | INFO     | chi2: 0.9874653536181807
[2026-03-15 07:54:26] 2026-03-15 06:53:25,746 | INFO     | current chi2=0.9874653536181807 (change=1.938954879343021 %)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,746 | INFO     | left removable region: 30
[2026-03-15 07:54:26] 2026-03-15 06:53:25,747 | INFO     | sum of square deviations: 1633472487.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,748 | INFO     | sum of deviations: -31566596681.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,748 | INFO     | mean x: 1773551919.5
[2026-03-15 07:54:26] 2026-03-15 06:53:25,748 | INFO     | mean y: 2539313.063218391
[2026-03-15 07:54:26] 2026-03-15 06:53:25,748 | INFO     | intersect: 34276148795.302296
[2026-03-15 07:54:26] 2026-03-15 06:53:25,749 | INFO     | chi2: 0.17648894779925128
[2026-03-15 07:54:26] 2026-03-15 06:53:25,749 | INFO     | current memory leak: -19.32 B/s (using 174 data points, chi2=0.18)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,749 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | ..............................
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . Timing measurements:
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . get job = 0 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . initial setup = 92 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . payload setup = 136 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . stage-in = 0 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . payload execution = 12890 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . stage-out = 3 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,750 | INFO     | . log creation = 1 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,751 | INFO     | ..............................
[2026-03-15 07:54:26] 2026-03-15 06:53:25,836 | INFO     | time since job start (13050s) is within the limit (345600.0s)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | 
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | job summary report
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | --------------------------------------------------
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | PanDA job id: 7046918976
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | task id: 48955010
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | errors: (none)
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | pilot state: finished 
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | transexitcode: 0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,877 | INFO     | exeerrorcode: 0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | exeerrordiag: 
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | exitcode: 0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | exitmsg: OK
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | cpuconsumptiontime: 48479 s
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | nevents: 400
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | neventsw: 0
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | pid: 6140
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | pgrp: 6140
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | corecount: 8
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | event service: False
[2026-03-15 07:54:26] 2026-03-15 06:53:25,878 | INFO     | sizes: {0: 2279747, 1: 2280208, 2: 2280208, 12: 2280236, 13030: 2310213, 13031: 2310212, 13034: 2319394, 13037: 2319450, 13038: 2319644}
[2026-03-15 07:54:26] 2026-03-15 06:53:25,879 | INFO     | --------------------------------------------------
[2026-03-15 07:54:26] 2026-03-15 06:53:25,879 | INFO     | 
[2026-03-15 07:54:26] 2026-03-15 06:53:25,879 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-15 07:54:26] 2026-03-15 06:53:26,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,295 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 07:54:26] 2026-03-15 06:53:26,296 | INFO     | job 7046918976 has completed (purged errors)
[2026-03-15 07:54:26] 2026-03-15 06:53:26,296 | INFO     | overall cleanup function is called
[2026-03-15 07:54:26] 2026-03-15 06:53:27,304 | INFO     | --- collectZombieJob: --- 10, [6140]
[2026-03-15 07:54:26] 2026-03-15 06:53:27,304 | INFO     | zombie collector waiting for pid 6140
[2026-03-15 07:54:26] 2026-03-15 06:53:27,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 07:54:26] 2026-03-15 06:53:27,305 | INFO     | collected zombie processes
[2026-03-15 07:54:26] 2026-03-15 06:53:27,305 | INFO     | will attempt to kill all subprocesses of pid=6140
[2026-03-15 07:54:26] 2026-03-15 06:53:27,445 | INFO     | process IDs to be killed: [6140] (in reverse order)
[2026-03-15 07:54:26] 2026-03-15 06:53:28,137 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 07:54:26] 2026-03-15 06:53:28,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 07:54:26] 2026-03-15 06:53:28,140 | INFO     | did not find any defunct processes belonging to 6140
[2026-03-15 07:54:26] 2026-03-15 06:53:28,143 | INFO     | did not find any defunct processes belonging to 6140
[2026-03-15 07:54:26] 2026-03-15 06:53:28,143 | INFO     | ready for new job
[2026-03-15 07:54:26] 2026-03-15 06:53:28,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 07:54:26] 2026-03-15 06:53:28,145 | INFO     | **************************************
[2026-03-15 07:54:26] 2026-03-15 06:53:28,145 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 07:54:26] 2026-03-15 06:53:28,145 | INFO     | **************************************
[2026-03-15 07:54:26] 2026-03-15 06:53:28,145 | INFO     | 
[2026-03-15 07:54:26] 2026-03-15 06:53:28,146 | INFO     | pilot is running in a VM
[2026-03-15 07:54:26] 2026-03-15 06:53:28,146 | INFO     | architecture information:
[2026-03-15 07:54:26] 2026-03-15 06:53:28,149 | INFO     | executing command: cat /etc/os-release
[2026-03-15 07:54:26] 2026-03-15 06:53:28,313 | INFO     | cat /etc/os-release:
[2026-03-15 07:54:26] NAME="CentOS Linux"
[2026-03-15 07:54:26] VERSION="7 (Core)"
[2026-03-15 07:54:26] ID="centos"
[2026-03-15 07:54:26] ID_LIKE="rhel fedora"
[2026-03-15 07:54:26] VERSION_ID="7"
[2026-03-15 07:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 07:54:26] ANSI_COLOR="0;31"
[2026-03-15 07:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 07:54:26] HOME_URL="https://www.centos.org/"
[2026-03-15 07:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 07:54:26] 
[2026-03-15 07:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 07:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 07:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 07:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 07:54:26] 
[2026-03-15 07:54:26] 2026-03-15 06:53:28,314 | INFO     | **************************************
[2026-03-15 07:54:26] 2026-03-15 06:53:28,816 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-15 07:54:26] 2026-03-15 06:53:29,096 | INFO     | sufficient remaining disk space (495022243840 B)
[2026-03-15 07:54:26] 2026-03-15 06:53:29,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 07:54:26] 2026-03-15 06:53:29,096 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 07:54:26] 2026-03-15 06:53:29,097 | INFO     | update_server=False
[2026-03-15 07:54:26] 2026-03-15 06:53:29,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 07:54:26] 2026-03-15 06:53:29,282 | INFO     | all payload control threads have been joined
[2026-03-15 07:54:26] 2026-03-15 06:53:29,349 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 07:54:26] 2026-03-15 06:53:29,349 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 07:54:26] 2026-03-15 06:53:29,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 07:54:26] 2026-03-15 06:53:29,350 | INFO     | will abort loop
[2026-03-15 07:54:26] 2026-03-15 06:53:29,438 | INFO     | all data control threads have been joined
[2026-03-15 07:54:26] 2026-03-15 06:53:29,615 | INFO     | all job control threads have been joined
[2026-03-15 07:54:26] 2026-03-15 06:53:29,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 07:54:26] 2026-03-15 06:53:30,102 | INFO     | [job] retrieve thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,288 | INFO     | [payload] control thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,355 | INFO     | [job] job monitor thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,445 | INFO     | [data] control thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,562 | INFO     | [data] copytool_in thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,621 | INFO     | [job] control thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,629 | INFO     | [payload] validate_post thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,641 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,890 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:30,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 07:54:26] 2026-03-15 06:53:31,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 07:54:26] 2026-03-15 06:53:31,124 | INFO     | [payload] failed_post thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:31,228 | INFO     | [job] validate thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:31,229 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:31,239 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:31,634 | INFO     | [data] copytool_out thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:31,898 | INFO     | [job] queue monitor thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:35,030 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 07:54:26] 2026-03-15 06:53:59,012 | INFO     | PID=1672 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 07:54:26] 2026-03-15 06:53:59,012 | INFO     | .. there are 9 such processes running
[2026-03-15 07:54:26] 2026-03-15 06:53:59,012 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 07:54:26] 2026-03-15 06:53:59,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 07:54:26] 2026-03-15 06:53:59,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 07:54:26] 2026-03-15 06:54:17,416 | INFO     | [monitor] cgroup control has ended
[2026-03-15 07:54:26] 2026-03-15 06:54:18,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666257770304)>', '<ExcThread(monitor, started 140665665083136)>']
[2026-03-15 07:54:26] 2026-03-15 06:54:18,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 07:54:26] 2026-03-15 06:54:18,126 | INFO     | [monitor] control thread has ended
[2026-03-15 07:54:26] 2026-03-15 06:54:23,116 | INFO     | all workflow threads have been joined
[2026-03-15 07:54:26] 2026-03-15 06:54:23,116 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 07:54:26] 2026-03-15 06:54:23,117 | INFO     | traces error code: 0
[2026-03-15 07:54:26] 2026-03-15 06:54:23,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 07:54:26] 2026-03-15 06:54:23,451 [wrapper] ==== pilot stdout END ====
[2026-03-15 07:54:26] 2026-03-15 06:54:23,504 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 07:54:26] 2026-03-15 06:54:23,612 [wrapper] pilotpid: 1672
[2026-03-15 07:54:26] 2026-03-15 06:54:23,736 [wrapper] Pilot exit status: 0
[2026-03-15 07:54:26] 2026-03-15 06:54:24,350 [wrapper] pandaids: 7046918976
[2026-03-15 07:54:26] 2026-03-15 06:54:25,386 [wrapper] cleanup supervisor_pilot  1432 1673
[2026-03-15 07:54:26] 2026-03-15 06:54:25,432 [wrapper] Test setup, not cleaning
[2026-03-15 07:54:26] 2026-03-15 06:54:25,505 [wrapper] apfmon messages muted
[2026-03-15 07:54:26] 2026-03-15 06:54:25,518 [wrapper] ==== wrapper stdout END ====
[2026-03-15 07:54:26] 2026-03-15 06:54:25,526 [wrapper] ==== wrapper stderr END ====
[2026-03-15 07:54:26]  *** Error codes and diagnostics ***
[2026-03-15 07:54:26]     "exeErrorCode": 0,
[2026-03-15 07:54:26]     "exeErrorDiag": "",
[2026-03-15 07:54:26]     "pilotErrorCode": 0,
[2026-03-15 07:54:26]     "pilotErrorDiag": "",
[2026-03-15 07:54:26]  *** Listing of results directory ***
[2026-03-15 07:54:26] total 615500
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc    585013 Mar 14 16:02 pilot3.tar.gz
[2026-03-15 07:54:26] -rwx------. 1 boinc boinc     36322 Mar 14 16:05 runpilot2-wrapper.sh
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc      5111 Mar 14 16:08 queuedata.json
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc       100 Mar 15 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 07:54:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 04:11 run_atlas
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc       105 Mar 15 04:11 job.xml
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc      6392 Mar 15 04:11 init_data.xml
[2026-03-15 07:54:26] -rw-r--r--. 2 boinc boinc 441206720 Mar 15 04:11 EVNT.46701403._001924.pool.root.1
[2026-03-15 07:54:26] -rw-r--r--. 2 boinc boinc     15845 Mar 15 04:11 start_atlas.sh
[2026-03-15 07:54:26] drwxrwx--x. 2 boinc boinc        68 Mar 15 04:11 shared
[2026-03-15 07:54:26] -rw-r--r--. 2 boinc boinc    597532 Mar 15 04:11 input.tar.gz
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc         0 Mar 15 04:11 boinc_lockfile
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc      2564 Mar 15 04:11 pandaJob.out
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc       415 Mar 15 04:15 workernode_map.json
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc   1006481 Mar 15 04:15 agis_schedconf.cvmfs.json
[2026-03-15 07:54:26] drwx------. 5 boinc boinc      4096 Mar 15 04:15 pilot3
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc 180608274 Mar 15 07:52 HITS.48955010._045134.pool.root.1
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc       532 Mar 15 07:52 boinc_task_state.xml
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc        95 Mar 15 07:53 pilot_heartbeat.json
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc      1019 Mar 15 07:53 memory_monitor_summary.json
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc   1511579 Mar 15 07:53 agis_ddmendpoints.agis.ALL.json
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc    438923 Mar 15 07:53 log.48955010._045134.job.log.tgz.1
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc      6327 Mar 15 07:53 heartbeat.json
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc      8192 Mar 15 07:54 boinc_mmap_file
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc        28 Mar 15 07:54 wrapper_checkpoint.txt
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc      5065 Mar 15 07:54 pilotlog.txt
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc   1827606 Mar 15 07:54 log.48955010._045134.job.log.1
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc       357 Mar 15 07:54 output.list
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc       620 Mar 15 07:54 runtime_log
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc   2283520 Mar 15 07:54 result.tar.gz
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc      8816 Mar 15 07:54 runtime_log.err
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc       656 Mar 15 07:54 G7ULDmljfL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNlqLDmmsFuAn.diag
[2026-03-15 07:54:26] -rw-r--r--. 1 boinc boinc     20734 Mar 15 07:54 stderr.txt
[2026-03-15 07:54:26] HITS file was successfully produced:
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc 180608274 Mar 15 07:52 shared/HITS.pool.root.1
[2026-03-15 07:54:26]  *** Contents of shared directory: ***
[2026-03-15 07:54:26] total 610076
[2026-03-15 07:54:26] -rw-r--r--. 2 boinc boinc 441206720 Mar 15 04:11 ATLAS.root_0
[2026-03-15 07:54:26] -rw-r--r--. 2 boinc boinc     15845 Mar 15 04:11 start_atlas.sh
[2026-03-15 07:54:26] -rw-r--r--. 2 boinc boinc    597532 Mar 15 04:11 input.tar.gz
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc 180608274 Mar 15 07:52 HITS.pool.root.1
[2026-03-15 07:54:26] -rw-------. 1 boinc boinc   2283520 Mar 15 07:54 result.tar.gz
07:54:27 (29908): run_atlas exited; CPU time 48666.853168
07:54:27 (29908): called boinc_finish(0)

</stderr_txt>
]]>

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