Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:48 (7667): wrapper (7.7.26015): starting
13:59:48 (7667): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 13:59:48] Arguments: --nthreads 12
[2026-03-14 13:59:48] Threads: 12
[2026-03-14 13:59:48] Checking for CVMFS
[2026-03-14 13:59:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:59:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:59:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:59:49] 2.11.2.0 2947 443487 98884 157285 2 50 17805392 20275200 1 130560 1 192874534 99.956 25147629 15691 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 13:59:49] CVMFS is ok
[2026-03-14 13:59:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 13:59:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 13:59:49] Further information can be found at the LHC@home message board.
[2026-03-14 13:59:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:59:49] Checking for apptainer binary...
[2026-03-14 13:59:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 13:59:49] Running /usr/bin/apptainer --version
[2026-03-14 13:59:49] apptainer version 1.3.2-1.el7
[2026-03-14 13:59:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:59:50] c-205-18.aglt2.org
[2026-03-14 13:59:50] apptainer works
[2026-03-14 13:59:50] Set ATHENA_PROC_NUMBER=12
[2026-03-14 13:59:50] Set ATHENA_CORE_NUMBER=12
[2026-03-14 13:59:50] Starting ATLAS job with PandaID=7046919259
[2026-03-14 13:59:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 15:05:41]  *** The last 200 lines of the pilot log: ***
[2026-03-14 15:05:41]  is_altstaged=None
[2026-03-14 15:05:41]  is_tar=False
[2026-03-14 15:05:41]  lfn=log.48955010._045296.job.log.tgz.1
[2026-03-14 15:05:41]  mtime=0
[2026-03-14 15:05:41]  protocol_id=None
[2026-03-14 15:05:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 15:05:41]  replicas=None
[2026-03-14 15:05:41]  scope=mc23_13p6TeV
[2026-03-14 15:05:41]  status=None
[2026-03-14 15:05:41]  status_code=0
[2026-03-14 15:05:41]  storage_token=
[2026-03-14 15:05:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7046919259/log.48955010._045296.job.log.tgz.1
[2026-03-14 15:05:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/23/log.48955010._045296.job.log.tgz.1
[2026-03-14 15:05:41]  workdir=None
[2026-03-14 15:05:41] ]
[2026-03-14 15:05:41] 2026-03-14 19:05:04,024 | INFO     | transferring file log.48955010._045296.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7046919259/log.48955010._045296.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 15:05:41] 2026-03-14 19:05:04,025 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7046919259/log.48955010._045296.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._045296.job
[2026-03-14 15:05:41] 2026-03-14 19:05:04,046 | INFO     | adding to output.list: log.48955010._045296.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/23/log.48955010._045296.job.log.tg
[2026-03-14 15:05:41] 2026-03-14 19:05:04,047 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 15:05:41] 2026-03-14 19:05:04,047 | INFO     | summary of transferred files:
[2026-03-14 15:05:41] 2026-03-14 19:05:04,047 | INFO     |  -- lfn=log.48955010._045296.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 15:05:41] 2026-03-14 19:05:04,048 | INFO     | stage-out finished correctly
[2026-03-14 15:05:41] 2026-03-14 19:05:05,056 | WARNING  | process 16227 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 15:05:41] 2026-03-14 19:05:05,057 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046919259/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 15:05:41] 2026-03-14 19:05:05,147 | INFO     | number of running child processes to parent process 16227: 1
[2026-03-14 15:05:41] 2026-03-14 19:05:05,147 | INFO     | maximum number of monitored processes: 6
[2026-03-14 15:05:41] 2026-03-14 19:05:05,689 | INFO     | time since job start (3894s) is within the limit (345600.0s)
[2026-03-14 15:05:41] 2026-03-14 19:05:05,689 | INFO     | 3901s have passed since pilot start - server update state is 'RUNNING'
[2026-03-14 15:05:41] 2026-03-14 19:05:06,176 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 15:05:41] 2026-03-14 19:05:07,650 | INFO     | monitor loop #297: job 0:7046919259 is in state 'finished'
[2026-03-14 15:05:41] 2026-03-14 19:05:07,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 15:05:41] 2026-03-14 19:05:07,695 | INFO     | time since job start (3896s) is within the limit (345600.0s)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,426 | INFO     | job 7046919259 has state=finished
[2026-03-14 15:05:41] 2026-03-14 19:05:08,426 | INFO     | preparing for final server update for job 7046919259 in state='finished'
[2026-03-14 15:05:41] 2026-03-14 19:05:08,427 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7046919259/jobReport.json
[2026-03-14 15:05:41] 2026-03-14 19:05:08,429 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 15:05:41] 2026-03-14 19:05:08,430 | INFO     | this job has now completed (state=finished)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,430 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,430 | INFO     | log transfer has been attempted: DONE
[2026-03-14 15:05:41] 2026-03-14 19:05:08,430 | INFO     | job 7046919259 has finished - writing final server update
[2026-03-14 15:05:41] 2026-03-14 19:05:08,430 | INFO     | total number of processed events: 400 (read)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,433 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046919259/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,433 | INFO     | extracted standard info from prmon json
[2026-03-14 15:05:41] 2026-03-14 19:05:08,433 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 15:05:41] 2026-03-14 19:05:08,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 15:05:41] 2026-03-14 19:05:08,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 15:05:41] 2026-03-14 19:05:08,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 15:05:41] 2026-03-14 19:05:08,436 | INFO     | fitting pss+swap vs Time
[2026-03-14 15:05:41] 2026-03-14 19:05:08,436 | INFO     | sum of square deviations: 57407588.0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,436 | INFO     | sum of deviations: -4389506808.000001
[2026-03-14 15:05:41] 2026-03-14 19:05:08,436 | INFO     | mean x: 1773513249.0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,436 | INFO     | mean y: 2728586.0877192984
[2026-03-14 15:05:41] 2026-03-14 19:05:08,437 | INFO     | intersect: 135609340042.4635
[2026-03-14 15:05:41] 2026-03-14 19:05:08,437 | INFO     | chi2: 0.049066765363075956
[2026-03-14 15:05:41] 2026-03-14 19:05:08,437 | INFO     | current memory leak: -76.46 B/s (using 57 data points, chi2=0.05)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,437 | INFO     | could have reported an average CPU frequency of 1706 MHz (6 samples)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | ..............................
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . Timing measurements:
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . get job = 0 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . initial setup = 7 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . payload setup = 7 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . stage-in = 0 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . payload execution = 3867 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . stage-out = 0 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,438 | INFO     | . log creation = 0 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,439 | INFO     | ..............................
[2026-03-14 15:05:41] 2026-03-14 19:05:08,516 | INFO     | 
[2026-03-14 15:05:41] 2026-03-14 19:05:08,516 | INFO     | job summary report
[2026-03-14 15:05:41] 2026-03-14 19:05:08,517 | INFO     | --------------------------------------------------
[2026-03-14 15:05:41] 2026-03-14 19:05:08,517 | INFO     | PanDA job id: 7046919259
[2026-03-14 15:05:41] 2026-03-14 19:05:08,517 | INFO     | task id: 48955010
[2026-03-14 15:05:41] 2026-03-14 19:05:08,517 | INFO     | errors: (none)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,517 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 15:05:41] 2026-03-14 19:05:08,517 | INFO     | pilot state: finished 
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | transexitcode: 0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | exeerrorcode: 0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | exeerrordiag: 
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | exitcode: 0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | exitmsg: OK
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | cpuconsumptiontime: 42311 s
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | nevents: 400
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | neventsw: 0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,518 | INFO     | pid: 16227
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | pgrp: 16227
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | corecount: 12
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | event service: False
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | sizes: {0: 2279974, 1: 2280208, 11: 2280208, 3879: 2306010, 3881: 2315008, 3883: 2315064, 3886: 2315386}
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | --------------------------------------------------
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | 
[2026-03-14 15:05:41] 2026-03-14 19:05:08,519 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 15:05:41] 2026-03-14 19:05:08,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,542 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,542 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 15:05:41] 2026-03-14 19:05:08,546 | INFO     | job 7046919259 has completed (purged errors)
[2026-03-14 15:05:41] 2026-03-14 19:05:08,546 | INFO     | overall cleanup function is called
[2026-03-14 15:05:41] 2026-03-14 19:05:09,554 | INFO     | --- collectZombieJob: --- 10, [16227]
[2026-03-14 15:05:41] 2026-03-14 19:05:09,554 | INFO     | zombie collector waiting for pid 16227
[2026-03-14 15:05:41] 2026-03-14 19:05:09,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 15:05:41] 2026-03-14 19:05:09,555 | INFO     | collected zombie processes
[2026-03-14 15:05:41] 2026-03-14 19:05:09,555 | INFO     | will attempt to kill all subprocesses of pid=16227
[2026-03-14 15:05:41] 2026-03-14 19:05:09,650 | INFO     | process IDs to be killed: [16227] (in reverse order)
[2026-03-14 15:05:41] 2026-03-14 19:05:09,705 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 15:05:41] 2026-03-14 19:05:09,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 15:05:41] 2026-03-14 19:05:09,709 | INFO     | did not find any defunct processes belonging to 16227
[2026-03-14 15:05:41] 2026-03-14 19:05:09,711 | INFO     | did not find any defunct processes belonging to 16227
[2026-03-14 15:05:41] 2026-03-14 19:05:09,711 | INFO     | ready for new job
[2026-03-14 15:05:41] 2026-03-14 19:05:09,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 15:05:41] 2026-03-14 19:05:09,712 | INFO     | **************************************
[2026-03-14 15:05:41] 2026-03-14 19:05:09,712 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 15:05:41] 2026-03-14 19:05:09,712 | INFO     | **************************************
[2026-03-14 15:05:41] 2026-03-14 19:05:09,713 | INFO     | 
[2026-03-14 15:05:41] 2026-03-14 19:05:09,713 | INFO     | architecture information:
[2026-03-14 15:05:41] 2026-03-14 19:05:09,714 | INFO     | executing command: cat /etc/os-release
[2026-03-14 15:05:41] 2026-03-14 19:05:09,729 | INFO     | cat /etc/os-release:
[2026-03-14 15:05:41] NAME="CentOS Linux"
[2026-03-14 15:05:41] VERSION="7 (Core)"
[2026-03-14 15:05:41] ID="centos"
[2026-03-14 15:05:41] ID_LIKE="rhel fedora"
[2026-03-14 15:05:41] VERSION_ID="7"
[2026-03-14 15:05:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 15:05:41] ANSI_COLOR="0;31"
[2026-03-14 15:05:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 15:05:41] HOME_URL="https://www.centos.org/"
[2026-03-14 15:05:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 15:05:41] 
[2026-03-14 15:05:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 15:05:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 15:05:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 15:05:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 15:05:41] 
[2026-03-14 15:05:41] 2026-03-14 19:05:09,729 | INFO     | **************************************
[2026-03-14 15:05:41] 2026-03-14 19:05:10,232 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 15:05:41] 2026-03-14 19:05:10,250 | INFO     | sufficient remaining disk space (28901900288 B)
[2026-03-14 15:05:41] 2026-03-14 19:05:10,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 15:05:41] 2026-03-14 19:05:10,251 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 15:05:41] 2026-03-14 19:05:10,251 | INFO     | update_server=False
[2026-03-14 15:05:41] 2026-03-14 19:05:10,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 15:05:41] 2026-03-14 19:05:10,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 15:05:41] 2026-03-14 19:05:10,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 15:05:41] 2026-03-14 19:05:10,662 | INFO     | all job control threads have been joined
[2026-03-14 15:05:41] 2026-03-14 19:05:10,839 | INFO     | all data control threads have been joined
[2026-03-14 15:05:41] 2026-03-14 19:05:11,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 15:05:41] 2026-03-14 19:05:11,160 | INFO     | aborting loop
[2026-03-14 15:05:41] 2026-03-14 19:05:11,257 | INFO     | [job] retrieve thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,257 | INFO     | [job] queue monitor thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,470 | INFO     | all payload control threads have been joined
[2026-03-14 15:05:41] 2026-03-14 19:05:11,545 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,638 | INFO     | [job] validate thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,667 | INFO     | [job] control thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,724 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,844 | INFO     | [data] control thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:11,845 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,166 | INFO     | [job] job monitor thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,214 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,229 | INFO     | [payload] failed_post thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,256 | INFO     | [data] copytool_out thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 15:05:41] 2026-03-14 19:05:12,335 | INFO     | [data] copytool_in thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,475 | INFO     | [payload] control thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:12,626 | INFO     | [payload] validate_post thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:16,294 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 15:05:41] 2026-03-14 19:05:17,531 | INFO     | [monitor] cgroup control has ended
[2026-03-14 15:05:41] 2026-03-14 19:05:18,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651904595776)>', '<ExcThread(monitor, started 140650573981440)>']
[2026-03-14 15:05:41] 2026-03-14 19:05:23,260 | INFO     | all workflow threads have been joined
[2026-03-14 15:05:41] 2026-03-14 19:05:23,260 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 15:05:41] 2026-03-14 19:05:23,267 | INFO     | traces error code: 0
[2026-03-14 15:05:41] 2026-03-14 19:05:23,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 15:05:41] 2026-03-14 19:05:40,894 | INFO     | PID=11851 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 15:05:41] 2026-03-14 19:05:40,894 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 15:05:41] 2026-03-14 19:05:40,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 15:05:41] 2026-03-14 19:05:40,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 15:05:41] 2026-03-14 19:05:40,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 15:05:41] 2026-03-14 19:05:40,895 | INFO     | [monitor] control thread has ended
[2026-03-14 15:05:41] 2026-03-14 19:05:40,974 [wrapper] ==== pilot stdout END ====
[2026-03-14 15:05:41] 2026-03-14 19:05:40,978 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 15:05:41] 2026-03-14 19:05:40,982 [wrapper] pilotpid: 11851
[2026-03-14 15:05:41] 2026-03-14 19:05:40,986 [wrapper] Pilot exit status: 0
[2026-03-14 15:05:41] 2026-03-14 19:05:41,002 [wrapper] pandaids: 7046919259
[2026-03-14 15:05:41] 2026-03-14 19:05:41,043 [wrapper] cleanup supervisor_pilot  2210 11852
[2026-03-14 15:05:41] 2026-03-14 19:05:41,047 [wrapper] Test setup, not cleaning
[2026-03-14 15:05:41] 2026-03-14 19:05:41,051 [wrapper] apfmon messages muted
[2026-03-14 15:05:41] 2026-03-14 19:05:41,055 [wrapper] ==== wrapper stdout END ====
[2026-03-14 15:05:41] 2026-03-14 19:05:41,058 [wrapper] ==== wrapper stderr END ====
[2026-03-14 15:05:41]  *** Error codes and diagnostics ***
[2026-03-14 15:05:41]     "exeErrorCode": 0,
[2026-03-14 15:05:41]     "exeErrorDiag": "",
[2026-03-14 15:05:41]     "pilotErrorCode": 0,
[2026-03-14 15:05:41]     "pilotErrorDiag": "",
[2026-03-14 15:05:41]  *** Listing of results directory ***
[2026-03-14 15:05:41] total 615780
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 11:02 pilot3.tar.gz
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 11:02 queuedata.json
[2026-03-14 15:05:41] -rwx------ 1 boincer umatlas     36322 Mar 14 11:02 runpilot2-wrapper.sh
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas       100 Mar 14 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 15:05:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 13:59 run_atlas
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas       105 Mar 14 13:59 job.xml
[2026-03-14 15:05:41] -rw-r--r-- 2 boincer umatlas 440464531 Mar 14 13:59 EVNT.46701403._001927.pool.root.1
[2026-03-14 15:05:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 13:59 start_atlas.sh
[2026-03-14 15:05:41] drwxrwx--x 2 boincer umatlas      4096 Mar 14 13:59 shared
[2026-03-14 15:05:41] -rw-r--r-- 2 boincer umatlas    597526 Mar 14 13:59 input.tar.gz
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas         0 Mar 14 13:59 boinc_lockfile
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas      2564 Mar 14 13:59 pandaJob.out
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas        57 Mar 14 13:59 setup.sh.local
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas   1005897 Mar 14 14:00 agis_schedconf.cvmfs.json
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas   1511579 Mar 14 14:00 agis_ddmendpoints.agis.ALL.json
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas       445 Mar 14 14:00 workernode_map.json
[2026-03-14 15:05:41] drwx------ 5 boincer umatlas      4096 Mar 14 14:00 pilot3
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 15:01 init_data.xml
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas 184239698 Mar 14 15:04 HITS.48955010._045296.pool.root.1
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas       530 Mar 14 15:04 boinc_task_state.xml
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas      1044 Mar 14 15:04 memory_monitor_summary.json
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas        95 Mar 14 15:04 pilot_heartbeat.json
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas    383915 Mar 14 15:05 log.48955010._045296.job.log.tgz.1
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas      6419 Mar 14 15:05 heartbeat.json
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 15:05 boinc_mmap_file
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas        27 Mar 14 15:05 wrapper_checkpoint.txt
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas       745 Mar 14 15:05 pilotlog.txt
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas    575162 Mar 14 15:05 log.48955010._045296.job.log.1
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas       357 Mar 14 15:05 output.list
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas       620 Mar 14 15:05 runtime_log
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas    972800 Mar 14 15:05 result.tar.gz
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 15:05 runtime_log.err
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas       659 Mar 14 15:05 9fqMDmigfL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiaqLDmG6Kwpm.diag
[2026-03-14 15:05:41] -rw-r--r-- 1 boincer umatlas     21533 Mar 14 15:05 stderr.txt
[2026-03-14 15:05:41] HITS file was successfully produced:
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas 184239698 Mar 14 15:04 shared/HITS.pool.root.1
[2026-03-14 15:05:41]  *** Contents of shared directory: ***
[2026-03-14 15:05:41] total 611628
[2026-03-14 15:05:41] -rw-r--r-- 2 boincer umatlas 440464531 Mar 14 13:59 ATLAS.root_0
[2026-03-14 15:05:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 13:59 start_atlas.sh
[2026-03-14 15:05:41] -rw-r--r-- 2 boincer umatlas    597526 Mar 14 13:59 input.tar.gz
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas 184239698 Mar 14 15:04 HITS.pool.root.1
[2026-03-14 15:05:41] -rw------- 1 boincer umatlas    972800 Mar 14 15:05 result.tar.gz
15:05:42 (7667): run_atlas exited; CPU time 42296.983100
15:05:42 (7667): called boinc_finish(0)

</stderr_txt>
]]>

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