Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:48:43 (28406): wrapper (7.7.26015): starting
10:48:43 (28406): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 10:48:43] Arguments: --nthreads 8
[2026-03-14 10:48:43] Threads: 8
[2026-03-14 10:48:43] Checking for CVMFS
[2026-03-14 10:48:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:48:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:48:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:48:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:48:44] 2.11.2.0 2837 1526 70676 157280 0 51 20026701 20275200 1 130560 0 681369 99.985 53185 36033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 10:48:44] CVMFS is ok
[2026-03-14 10:48:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:48:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:48:44] Further information can be found at the LHC@home message board.
[2026-03-14 10:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:48:44] Checking for apptainer binary...
[2026-03-14 10:48:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:48:44] Running /usr/bin/apptainer --version
[2026-03-14 10:48:44] apptainer version 1.3.2-1.el7
[2026-03-14 10:48:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:48:46] c-204-21.aglt2.org
[2026-03-14 10:48:46] apptainer works
[2026-03-14 10:48:46] Set ATHENA_PROC_NUMBER=8
[2026-03-14 10:48:46] Set ATHENA_CORE_NUMBER=8
[2026-03-14 10:48:46] Starting ATLAS job with PandaID=7046469630
[2026-03-14 10:48:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:43:27]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:43:27] 2026-03-14 16:42:23,869 | INFO     | intersect: -44499581284.51025
[2026-03-14 12:43:27] 2026-03-14 16:42:23,869 | INFO     | chi2: 1.4776384956811486
[2026-03-14 12:43:27] 2026-03-14 16:42:23,870 | INFO     | current chi2=1.4776384956811486 (change=-0.2066946989558534 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,870 | INFO     | right removable region: 105
[2026-03-14 12:43:27] 2026-03-14 16:42:23,870 | INFO     | sum of square deviations: 369281342.5
[2026-03-14 12:43:27] 2026-03-14 16:42:23,870 | INFO     | sum of deviations: -6197440728.999999
[2026-03-14 12:43:27] 2026-03-14 16:42:23,871 | INFO     | mean x: 1773503283.5
[2026-03-14 12:43:27] 2026-03-14 16:42:23,871 | INFO     | mean y: 2547956.6981132077
[2026-03-14 12:43:27] 2026-03-14 16:42:23,871 | INFO     | intersect: 29766254424.42504
[2026-03-14 12:43:27] 2026-03-14 16:42:23,871 | INFO     | chi2: 0.07221591328737809
[2026-03-14 12:43:27] 2026-03-14 16:42:23,871 | INFO     | current chi2=0.07221591328737809 (change=95.10264655641721 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,871 | INFO     | sum of square deviations: 319447850.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,872 | INFO     | sum of deviations: -3765678840.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,872 | INFO     | mean x: 1773503436.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,872 | INFO     | mean y: 2540388.079207921
[2026-03-14 12:43:27] 2026-03-14 16:42:23,872 | INFO     | intersect: 20908752032.992435
[2026-03-14 12:43:27] 2026-03-14 16:42:23,873 | INFO     | chi2: 0.053773456437945996
[2026-03-14 12:43:27] 2026-03-14 16:42:23,873 | INFO     | current chi2=0.053773456437945996 (change=25.537940337390246 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,873 | INFO     | sum of square deviations: 274312120.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,873 | INFO     | sum of deviations: 49332286.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,873 | INFO     | mean x: 1773503588.5
[2026-03-14 12:43:27] 2026-03-14 16:42:23,874 | INFO     | mean y: 2527482.625
[2026-03-14 12:43:27] 2026-03-14 16:42:23,874 | INFO     | intersect: -316419366.1322051
[2026-03-14 12:43:27] 2026-03-14 16:42:23,874 | INFO     | chi2: 0.01202003724281996
[2026-03-14 12:43:27] 2026-03-14 16:42:23,874 | INFO     | current chi2=0.01202003724281996 (change=77.64689488262493 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,874 | INFO     | sum of square deviations: 233641590.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,875 | INFO     | sum of deviations: 491690743.9999999
[2026-03-14 12:43:27] 2026-03-14 16:42:23,875 | INFO     | mean x: 1773503741.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,875 | INFO     | mean y: 2525955.2967032967
[2026-03-14 12:43:27] 2026-03-14 16:42:23,875 | INFO     | intersect: -3729752077.475942
[2026-03-14 12:43:27] 2026-03-14 16:42:23,875 | INFO     | chi2: 8.820530932384121e-05
[2026-03-14 12:43:27] 2026-03-14 16:42:23,876 | INFO     | current chi2=8.820530932384121e-05 (change=99.26618106465077 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,876 | INFO     | sum of square deviations: 197203697.5
[2026-03-14 12:43:27] 2026-03-14 16:42:23,876 | INFO     | sum of deviations: 345682486.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,876 | INFO     | mean x: 1773503893.5
[2026-03-14 12:43:27] 2026-03-14 16:42:23,876 | INFO     | mean y: 2526560.3255813955
[2026-03-14 12:43:27] 2026-03-14 16:42:23,877 | INFO     | intersect: -3106285508.655829
[2026-03-14 12:43:27] 2026-03-14 16:42:23,877 | INFO     | chi2: 5.3714721271330674e-05
[2026-03-14 12:43:27] 2026-03-14 16:42:23,877 | INFO     | current chi2=5.3714721271330674e-05 (change=39.102621278590085 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,877 | INFO     | sum of square deviations: 164765880.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,878 | INFO     | sum of deviations: 252677616.00000003
[2026-03-14 12:43:27] 2026-03-14 16:42:23,878 | INFO     | mean x: 1773504046.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,878 | INFO     | mean y: 2526997.827160494
[2026-03-14 12:43:27] 2026-03-14 16:42:23,878 | INFO     | intersect: -2717239827.134624
[2026-03-14 12:43:27] 2026-03-14 16:42:23,879 | INFO     | chi2: 4.60846012964698e-05
[2026-03-14 12:43:27] 2026-03-14 16:42:23,879 | INFO     | current chi2=4.60846012964698e-05 (change=14.204895407198778 %)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,879 | INFO     | left removable region: 60
[2026-03-14 12:43:27] 2026-03-14 16:42:23,879 | INFO     | sum of square deviations: 28242390.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,879 | INFO     | sum of deviations: -25946228.000000004
[2026-03-14 12:43:27] 2026-03-14 16:42:23,879 | INFO     | mean x: 1773504778.0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,880 | INFO     | mean y: 2528826.4
[2026-03-14 12:43:27] 2026-03-14 16:42:23,880 | INFO     | intersect: 1631844168.6595395
[2026-03-14 12:43:27] 2026-03-14 16:42:23,880 | INFO     | chi2: 7.828728362306097e-06
[2026-03-14 12:43:27] 2026-03-14 16:42:23,880 | INFO     | current memory leak: -0.92 B/s (using 45 data points, chi2=0.00)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,880 | INFO     | could have reported an average CPU frequency of 1712 MHz (7 samples)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | ..............................
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | . Timing measurements:
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | . get job = 0 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | . initial setup = 8 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | . payload setup = 8 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | . stage-in = 0 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,881 | INFO     | . payload execution = 6766 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,882 | INFO     | . stage-out = 0 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,882 | INFO     | . log creation = 0 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,882 | INFO     | ..............................
[2026-03-14 12:43:27] 2026-03-14 16:42:23,964 | INFO     | 
[2026-03-14 12:43:27] 2026-03-14 16:42:23,964 | INFO     | job summary report
[2026-03-14 12:43:27] 2026-03-14 16:42:23,964 | INFO     | --------------------------------------------------
[2026-03-14 12:43:27] 2026-03-14 16:42:23,964 | INFO     | PanDA job id: 7046469630
[2026-03-14 12:43:27] 2026-03-14 16:42:23,964 | INFO     | task id: 48955015
[2026-03-14 12:43:27] 2026-03-14 16:42:23,965 | INFO     | errors: (none)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,965 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 12:43:27] 2026-03-14 16:42:23,965 | INFO     | pilot state: finished 
[2026-03-14 12:43:27] 2026-03-14 16:42:23,965 | INFO     | transexitcode: 0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,965 | INFO     | exeerrorcode: 0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,966 | INFO     | exeerrordiag: 
[2026-03-14 12:43:27] 2026-03-14 16:42:23,966 | INFO     | exitcode: 0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,966 | INFO     | exitmsg: OK
[2026-03-14 12:43:27] 2026-03-14 16:42:23,966 | INFO     | cpuconsumptiontime: 49761 s
[2026-03-14 12:43:27] 2026-03-14 16:42:23,966 | INFO     | nevents: 400
[2026-03-14 12:43:27] 2026-03-14 16:42:23,966 | INFO     | neventsw: 0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,967 | INFO     | pid: 4536
[2026-03-14 12:43:27] 2026-03-14 16:42:23,967 | INFO     | pgrp: 4536
[2026-03-14 12:43:27] 2026-03-14 16:42:23,967 | INFO     | corecount: 8
[2026-03-14 12:43:27] 2026-03-14 16:42:23,967 | INFO     | event service: False
[2026-03-14 12:43:27] 2026-03-14 16:42:23,967 | INFO     | sizes: {0: 2280236, 11: 2280236, 6778: 2307389, 6779: 2316443, 6782: 2316581}
[2026-03-14 12:43:27] 2026-03-14 16:42:23,967 | INFO     | --------------------------------------------------
[2026-03-14 12:43:27] 2026-03-14 16:42:23,968 | INFO     | 
[2026-03-14 12:43:27] 2026-03-14 16:42:23,968 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 12:43:27] 2026-03-14 16:42:23,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,996 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,996 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 12:43:27] 2026-03-14 16:42:23,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:23,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 12:43:27] 2026-03-14 16:42:24,000 | INFO     | job 7046469630 has completed (purged errors)
[2026-03-14 12:43:27] 2026-03-14 16:42:24,000 | INFO     | overall cleanup function is called
[2026-03-14 12:43:27] 2026-03-14 16:42:25,008 | INFO     | --- collectZombieJob: --- 10, [4536]
[2026-03-14 12:43:27] 2026-03-14 16:42:25,008 | INFO     | zombie collector waiting for pid 4536
[2026-03-14 12:43:27] 2026-03-14 16:42:25,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 12:43:27] 2026-03-14 16:42:25,009 | INFO     | collected zombie processes
[2026-03-14 12:43:27] 2026-03-14 16:42:25,009 | INFO     | will attempt to kill all subprocesses of pid=4536
[2026-03-14 12:43:27] 2026-03-14 16:42:25,092 | INFO     | process IDs to be killed: [4536] (in reverse order)
[2026-03-14 12:43:27] 2026-03-14 16:42:25,154 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 12:43:27] 2026-03-14 16:42:25,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 12:43:27] 2026-03-14 16:42:25,159 | INFO     | did not find any defunct processes belonging to 4536
[2026-03-14 12:43:27] 2026-03-14 16:42:25,162 | INFO     | did not find any defunct processes belonging to 4536
[2026-03-14 12:43:27] 2026-03-14 16:42:25,163 | INFO     | ready for new job
[2026-03-14 12:43:27] 2026-03-14 16:42:25,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 12:43:27] 2026-03-14 16:42:25,165 | INFO     | **************************************
[2026-03-14 12:43:27] 2026-03-14 16:42:25,165 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 12:43:27] 2026-03-14 16:42:25,165 | INFO     | **************************************
[2026-03-14 12:43:27] 2026-03-14 16:42:25,165 | INFO     | 
[2026-03-14 12:43:27] 2026-03-14 16:42:25,166 | INFO     | architecture information:
[2026-03-14 12:43:27] 2026-03-14 16:42:25,166 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:43:27] 2026-03-14 16:42:25,186 | INFO     | cat /etc/os-release:
[2026-03-14 12:43:27] NAME="CentOS Linux"
[2026-03-14 12:43:27] VERSION="7 (Core)"
[2026-03-14 12:43:27] ID="centos"
[2026-03-14 12:43:27] ID_LIKE="rhel fedora"
[2026-03-14 12:43:27] VERSION_ID="7"
[2026-03-14 12:43:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:43:27] ANSI_COLOR="0;31"
[2026-03-14 12:43:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:43:27] HOME_URL="https://www.centos.org/"
[2026-03-14 12:43:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:43:27] 
[2026-03-14 12:43:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:43:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:43:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:43:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:43:27] 
[2026-03-14 12:43:27] 2026-03-14 16:42:25,186 | INFO     | **************************************
[2026-03-14 12:43:27] 2026-03-14 16:42:25,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 12:43:27] 2026-03-14 16:42:25,709 | INFO     | sufficient remaining disk space (18097373184 B)
[2026-03-14 12:43:27] 2026-03-14 16:42:25,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:43:27] 2026-03-14 16:42:25,710 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:43:27] 2026-03-14 16:42:25,710 | INFO     | update_server=False
[2026-03-14 12:43:27] 2026-03-14 16:42:25,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:43:27] 2026-03-14 16:42:25,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:43:27] 2026-03-14 16:42:26,489 | INFO     | all payload control threads have been joined
[2026-03-14 12:43:27] 2026-03-14 16:42:26,581 | INFO     | all data control threads have been joined
[2026-03-14 12:43:27] 2026-03-14 16:42:26,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:43:27] 2026-03-14 16:42:26,645 | INFO     | aborting loop
[2026-03-14 12:43:27] 2026-03-14 16:42:26,716 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:26,717 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:26,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:43:27] 2026-03-14 16:42:26,977 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:27,194 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:27,298 | INFO     | all job control threads have been joined
[2026-03-14 12:43:27] 2026-03-14 16:42:27,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:43:27] 2026-03-14 16:42:27,495 | INFO     | [payload] control thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:27,584 | INFO     | [data] control thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:27,647 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:27,934 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:28,011 | INFO     | [job] validate thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:28,105 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:28,139 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:28,204 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:28,303 | INFO     | [job] control thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:28,746 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:31,331 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:35,935 | INFO     | job.realtimelogging is not enabled
[2026-03-14 12:43:27] 2026-03-14 16:42:36,941 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:43:27] 2026-03-14 16:42:55,800 | INFO     | PID=32385 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 12:43:27] 2026-03-14 16:42:55,801 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:43:27] 2026-03-14 16:42:55,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:43:27] 2026-03-14 16:42:55,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:43:27] 2026-03-14 16:43:20,902 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:43:27] 2026-03-14 16:43:22,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225345455936)>', '<ExcThread(monitor, started 140224592058112)>']
[2026-03-14 12:43:27] 2026-03-14 16:43:22,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:43:27] 2026-03-14 16:43:22,915 | INFO     | [monitor] control thread has ended
[2026-03-14 12:43:27] 2026-03-14 16:43:27,239 | INFO     | all workflow threads have been joined
[2026-03-14 12:43:27] 2026-03-14 16:43:27,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:43:27] 2026-03-14 16:43:27,239 | INFO     | traces error code: 0
[2026-03-14 12:43:27] 2026-03-14 16:43:27,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:43:27] 2026-03-14 16:43:27,370 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:43:27] 2026-03-14 16:43:27,375 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:43:27] 2026-03-14 16:43:27,380 [wrapper] pilotpid: 32385
[2026-03-14 12:43:27] 2026-03-14 16:43:27,385 [wrapper] Pilot exit status: 0
[2026-03-14 12:43:27] 2026-03-14 16:43:27,405 [wrapper] pandaids: 7046469630
[2026-03-14 12:43:27] 2026-03-14 16:43:27,459 [wrapper] cleanup supervisor_pilot 14009 32386
[2026-03-14 12:43:27] 2026-03-14 16:43:27,464 [wrapper] Test setup, not cleaning
[2026-03-14 12:43:27] 2026-03-14 16:43:27,469 [wrapper] apfmon messages muted
[2026-03-14 12:43:27] 2026-03-14 16:43:27,473 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:43:27] 2026-03-14 16:43:27,478 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:43:27]  *** Error codes and diagnostics ***
[2026-03-14 12:43:27]     "exeErrorCode": 0,
[2026-03-14 12:43:27]     "exeErrorDiag": "",
[2026-03-14 12:43:27]     "pilotErrorCode": 0,
[2026-03-14 12:43:27]     "pilotErrorDiag": "",
[2026-03-14 12:43:27]  *** Listing of results directory ***
[2026-03-14 12:43:27] total 616420
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 05:39 pilot3.tar.gz
[2026-03-14 12:43:27] -rwx------ 1 boincer umatlas     36322 Mar 14 05:43 runpilot2-wrapper.sh
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 05:47 queuedata.json
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas       100 Mar 14 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:43:27] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 10:48 run_atlas
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas       105 Mar 14 10:48 job.xml
[2026-03-14 12:43:27] -rw-r--r-- 2 boincer umatlas 436380834 Mar 14 10:48 EVNT.46701403._002554.pool.root.1
[2026-03-14 12:43:27] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 10:48 start_atlas.sh
[2026-03-14 12:43:27] drwxrwx--x 2 boincer umatlas      4096 Mar 14 10:48 shared
[2026-03-14 12:43:27] -rw-r--r-- 2 boincer umatlas    597537 Mar 14 10:48 input.tar.gz
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas         0 Mar 14 10:48 boinc_lockfile
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas      2571 Mar 14 10:48 pandaJob.out
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas        57 Mar 14 10:48 setup.sh.local
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas   1004579 Mar 14 10:49 agis_schedconf.cvmfs.json
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas   1511579 Mar 14 10:49 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas       431 Mar 14 10:49 workernode_map.json
[2026-03-14 12:43:27] drwx------ 5 boincer umatlas      4096 Mar 14 10:49 pilot3
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas      5909 Mar 14 12:37 init_data.xml
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas 188266869 Mar 14 12:41 HITS.48955015._024835.pool.root.1
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas       530 Mar 14 12:41 boinc_task_state.xml
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas      1047 Mar 14 12:42 memory_monitor_summary.json
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas    346437 Mar 14 12:42 log.48955015._024835.job.log.tgz.1
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas      6398 Mar 14 12:42 heartbeat.json
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas        95 Mar 14 12:42 pilot_heartbeat.json
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 12:43 boinc_mmap_file
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas        27 Mar 14 12:43 wrapper_checkpoint.txt
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas      4814 Mar 14 12:43 pilotlog.txt
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas    964395 Mar 14 12:43 log.48955015._024835.job.log.1
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas       357 Mar 14 12:43 output.list
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas       620 Mar 14 12:43 runtime_log
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas   1331200 Mar 14 12:43 result.tar.gz
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas      9341 Mar 14 12:43 runtime_log.err
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas       658 Mar 14 12:43 CnBLDmDiaL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJfsLDm9tZ4Cn.diag
[2026-03-14 12:43:27] -rw-r--r-- 1 boincer umatlas     20843 Mar 14 12:43 stderr.txt
[2026-03-14 12:43:27] HITS file was successfully produced:
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas 188266869 Mar 14 12:41 shared/HITS.pool.root.1
[2026-03-14 12:43:27]  *** Contents of shared directory: ***
[2026-03-14 12:43:27] total 611920
[2026-03-14 12:43:27] -rw-r--r-- 2 boincer umatlas 436380834 Mar 14 10:48 ATLAS.root_0
[2026-03-14 12:43:27] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 10:48 start_atlas.sh
[2026-03-14 12:43:27] -rw-r--r-- 2 boincer umatlas    597537 Mar 14 10:48 input.tar.gz
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas 188266869 Mar 14 12:41 HITS.pool.root.1
[2026-03-14 12:43:27] -rw------- 1 boincer umatlas   1331200 Mar 14 12:43 result.tar.gz
12:43:28 (28406): run_atlas exited; CPU time 49770.946999
12:43:28 (28406): called boinc_finish(0)

</stderr_txt>
]]>

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