Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:50:10 (2981883): wrapper (7.7.26015): starting
10:50:10 (2981883): wrapper: running run_atlas (--nthreads 9)
[2026-03-14 10:50:10] Arguments: --nthreads 9
[2026-03-14 10:50:10] Threads: 9
[2026-03-14 10:50:10] Checking for CVMFS
[2026-03-14 10:50:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:50:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:50:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:50:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:50:11] 2.13.3.0 2295398 109182 118976 157280 0 188 19126769 37030913 1832 16776704 0 91134092 99.985 4695027 25277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 10:50:11] CVMFS is ok
[2026-03-14 10:50:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:50:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:50:11] Further information can be found at the LHC@home message board.
[2026-03-14 10:50:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:50:11] Checking for apptainer binary...
[2026-03-14 10:50:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:50:11] Running /usr/bin/apptainer --version
[2026-03-14 10:50:11] apptainer version 1.4.5-2.el9
[2026-03-14 10:50:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:50:11] c-205-36.aglt2.org
[2026-03-14 10:50:11] apptainer works
[2026-03-14 10:50:11] Set ATHENA_PROC_NUMBER=9
[2026-03-14 10:50:11] Set ATHENA_CORE_NUMBER=9
[2026-03-14 10:50:11] Starting ATLAS job with PandaID=7047693613
[2026-03-14 10:50:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:12:38]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:12:38]  is_altstaged=None
[2026-03-14 12:12:38]  is_tar=False
[2026-03-14 12:12:38]  lfn=log.48958610._001400.job.log.tgz.1
[2026-03-14 12:12:38]  mtime=0
[2026-03-14 12:12:38]  protocol_id=None
[2026-03-14 12:12:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 12:12:38]  replicas=None
[2026-03-14 12:12:38]  scope=mc23_13p6TeV
[2026-03-14 12:12:38]  status=None
[2026-03-14 12:12:38]  status_code=0
[2026-03-14 12:12:38]  storage_token=
[2026-03-14 12:12:38]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7047693613/log.48958610._001400.job.log.tgz.1
[2026-03-14 12:12:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/75/log.48958610._001400.job.log.tgz.1
[2026-03-14 12:12:38]  workdir=None
[2026-03-14 12:12:38] ]
[2026-03-14 12:12:38] 2026-03-14 16:12:07,465 | INFO     | transferring file log.48958610._001400.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7047693613/log.48958610._001400.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 12:12:38] 2026-03-14 16:12:07,465 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7047693613/log.48958610._001400.job.log.tgz.1 /tmp/boinchome/slots/1/log.48958610._001400.job
[2026-03-14 12:12:38] 2026-03-14 16:12:07,482 | INFO     | adding to output.list: log.48958610._001400.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/75/log.48958610._001400.job.log.tg
[2026-03-14 12:12:38] 2026-03-14 16:12:07,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 12:12:38] 2026-03-14 16:12:07,483 | INFO     | summary of transferred files:
[2026-03-14 12:12:38] 2026-03-14 16:12:07,483 | INFO     |  -- lfn=log.48958610._001400.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 12:12:38] 2026-03-14 16:12:07,483 | INFO     | stage-out finished correctly
[2026-03-14 12:12:38] 2026-03-14 16:12:07,588 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 12:12:38] 2026-03-14 16:12:08,378 | INFO     | time since job start (4903s) is within the limit (349056.0s)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,384 | INFO     | time since job start (4905s) is within the limit (349056.0s)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,525 | INFO     | job 7047693613 has state=finished
[2026-03-14 12:12:38] 2026-03-14 16:12:10,526 | INFO     | preparing for final server update for job 7047693613 in state='finished'
[2026-03-14 12:12:38] 2026-03-14 16:12:10,526 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7047693613/jobReport.json
[2026-03-14 12:12:38] 2026-03-14 16:12:10,529 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-14 12:12:38] 2026-03-14 16:12:10,529 | INFO     | this job has now completed (state=finished)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,529 | INFO     | log transfer has been attempted: DONE
[2026-03-14 12:12:38] 2026-03-14 16:12:10,529 | INFO     | job 7047693613 has finished - writing final server update
[2026-03-14 12:12:38] 2026-03-14 16:12:10,530 | INFO     | total number of processed events: 400 (read)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,536 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7047693613/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,537 | INFO     | extracted standard info from prmon json
[2026-03-14 12:12:38] 2026-03-14 16:12:10,537 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 12:12:38] 2026-03-14 16:12:10,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 12:12:38] 2026-03-14 16:12:10,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 12:12:38] 2026-03-14 16:12:10,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 12:12:38] 2026-03-14 16:12:10,540 | INFO     | fitting pss+swap vs Time
[2026-03-14 12:12:38] 2026-03-14 16:12:10,540 | INFO     | sum of square deviations: 120605052.0
[2026-03-14 12:12:38] 2026-03-14 16:12:10,540 | INFO     | sum of deviations: -775291151.0000001
[2026-03-14 12:12:38] 2026-03-14 16:12:10,541 | INFO     | mean x: 1773502347.0
[2026-03-14 12:12:38] 2026-03-14 16:12:10,541 | INFO     | mean y: 2606409.0684931506
[2026-03-14 12:12:38] 2026-03-14 16:12:10,541 | INFO     | intersect: 11403295294.861036
[2026-03-14 12:12:38] 2026-03-14 16:12:10,541 | INFO     | chi2: 0.04996054639550414
[2026-03-14 12:12:38] 2026-03-14 16:12:10,541 | INFO     | current memory leak: -6.43 B/s (using 73 data points, chi2=0.05)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | could have reported an average CPU frequency of 2656 MHz (6 samples)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | ..............................
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | . Timing measurements:
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | . get job = 0 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | . initial setup = 6 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | . payload setup = 5 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | . stage-in = 0 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,542 | INFO     | . payload execution = 4880 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,543 | INFO     | . stage-out = 0 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,543 | INFO     | . log creation = 0 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,543 | INFO     | ..............................
[2026-03-14 12:12:38] 2026-03-14 16:12:10,647 | INFO     | 
[2026-03-14 12:12:38] 2026-03-14 16:12:10,647 | INFO     | job summary report
[2026-03-14 12:12:38] 2026-03-14 16:12:10,647 | INFO     | --------------------------------------------------
[2026-03-14 12:12:38] 2026-03-14 16:12:10,647 | INFO     | PanDA job id: 7047693613
[2026-03-14 12:12:38] 2026-03-14 16:12:10,647 | INFO     | task id: 48958610
[2026-03-14 12:12:38] 2026-03-14 16:12:10,647 | INFO     | errors: (none)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | pilot state: finished 
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | transexitcode: 0
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | exeerrorcode: 0
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | exeerrordiag: 
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | exitcode: 0
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | exitmsg: OK
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | cpuconsumptiontime: 39830 s
[2026-03-14 12:12:38] 2026-03-14 16:12:10,648 | INFO     | nevents: 400
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | neventsw: 0
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | pid: 2991269
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | pgrp: 2991269
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | corecount: 9
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | event service: False
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | sizes: {0: 2279095, 1: 2280213, 12: 2280213, 4889: 2306590, 4890: 2315644, 4893: 2315782}
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | --------------------------------------------------
[2026-03-14 12:12:38] 2026-03-14 16:12:10,649 | INFO     | 
[2026-03-14 12:12:38] 2026-03-14 16:12:10,650 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-14 12:12:38] 2026-03-14 16:12:10,665 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,668 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,668 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 12:12:38] 2026-03-14 16:12:10,668 | INFO     | job 7047693613 has completed (purged errors)
[2026-03-14 12:12:38] 2026-03-14 16:12:10,668 | INFO     | overall cleanup function is called
[2026-03-14 12:12:38] 2026-03-14 16:12:11,313 | WARNING  | process 2991269 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 12:12:38] 2026-03-14 16:12:11,549 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:12:38] 2026-03-14 16:12:11,676 | INFO     | --- collectZombieJob: --- 10, [2991269]
[2026-03-14 12:12:38] 2026-03-14 16:12:11,677 | INFO     | zombie collector waiting for pid 2991269
[2026-03-14 12:12:38] 2026-03-14 16:12:11,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 12:12:38] 2026-03-14 16:12:11,678 | INFO     | collected zombie processes
[2026-03-14 12:12:38] 2026-03-14 16:12:11,678 | INFO     | will attempt to kill all subprocesses of pid=2991269
[2026-03-14 12:12:38] 2026-03-14 16:12:11,983 | INFO     | PID=2986069 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 12:12:38] 2026-03-14 16:12:11,984 | INFO     | .. there are 3 such processes running
[2026-03-14 12:12:38] 2026-03-14 16:12:12,046 | INFO     | number of running child processes to parent process 2991269: 1
[2026-03-14 12:12:38] 2026-03-14 16:12:12,046 | INFO     | maximum number of monitored processes: 6
[2026-03-14 12:12:38] 2026-03-14 16:12:12,046 | INFO     | aborting job monitoring since job object (job id=7047693613) has expired
[2026-03-14 12:12:38] 2026-03-14 16:12:12,106 | INFO     | process IDs to be killed: [2991269] (in reverse order)
[2026-03-14 12:12:38] 2026-03-14 16:12:12,158 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 12:12:38] 2026-03-14 16:12:12,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 12:12:38] 2026-03-14 16:12:12,163 | INFO     | did not find any defunct processes belonging to 2991269
[2026-03-14 12:12:38] 2026-03-14 16:12:12,168 | INFO     | did not find any defunct processes belonging to 2991269
[2026-03-14 12:12:38] 2026-03-14 16:12:12,168 | INFO     | ready for new job
[2026-03-14 12:12:38] 2026-03-14 16:12:12,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 12:12:38] 2026-03-14 16:12:12,170 | INFO     | **************************************
[2026-03-14 12:12:38] 2026-03-14 16:12:12,170 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 12:12:38] 2026-03-14 16:12:12,170 | INFO     | **************************************
[2026-03-14 12:12:38] 2026-03-14 16:12:12,171 | INFO     | 
[2026-03-14 12:12:38] 2026-03-14 16:12:12,173 | INFO     | architecture information:
[2026-03-14 12:12:38] 2026-03-14 16:12:12,173 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:12:38] 2026-03-14 16:12:12,184 | INFO     | cat /etc/os-release:
[2026-03-14 12:12:38] NAME="CentOS Linux"
[2026-03-14 12:12:38] VERSION="7 (Core)"
[2026-03-14 12:12:38] ID="centos"
[2026-03-14 12:12:38] ID_LIKE="rhel fedora"
[2026-03-14 12:12:38] VERSION_ID="7"
[2026-03-14 12:12:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:12:38] ANSI_COLOR="0;31"
[2026-03-14 12:12:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:12:38] HOME_URL="https://www.centos.org/"
[2026-03-14 12:12:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:12:38] 
[2026-03-14 12:12:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:12:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:12:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:12:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:12:38] 
[2026-03-14 12:12:38] 2026-03-14 16:12:12,184 | INFO     | **************************************
[2026-03-14 12:12:38] 2026-03-14 16:12:12,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-14 12:12:38] 2026-03-14 16:12:12,699 | INFO     | sufficient remaining disk space (40368078848 B)
[2026-03-14 12:12:38] 2026-03-14 16:12:12,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:12:38] 2026-03-14 16:12:12,700 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:12:38] 2026-03-14 16:12:12,700 | INFO     | update_server=False
[2026-03-14 12:12:38] 2026-03-14 16:12:12,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:12:38] 2026-03-14 16:12:12,700 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-14 12:12:38] 2026-03-14 16:12:12,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:12:38] 2026-03-14 16:12:12,701 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:12:38] 2026-03-14 16:12:12,701 | INFO     | will abort loop
[2026-03-14 12:12:38] 2026-03-14 16:12:12,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:12:38] 2026-03-14 16:12:12,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:12:38] 2026-03-14 16:12:13,015 | INFO     | all data control threads have been joined
[2026-03-14 12:12:38] 2026-03-14 16:12:13,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:12:38] 2026-03-14 16:12:13,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:12:38] 2026-03-14 16:12:13,705 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:13,707 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:13,805 | INFO     | all payload control threads have been joined
[2026-03-14 12:12:38] 2026-03-14 16:12:13,891 | INFO     | [job] validate thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,020 | INFO     | [data] control thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,021 | INFO     | all job control threads have been joined
[2026-03-14 12:12:38] 2026-03-14 16:12:14,285 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,448 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,485 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,650 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,750 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,810 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:14,810 | INFO     | [payload] control thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:15,026 | INFO     | [job] control thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:15,105 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:15,203 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:15,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:12:38] 2026-03-14 16:12:16,662 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:17,700 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:12:38] 2026-03-14 16:12:32,491 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:12:38] 2026-03-14 16:12:33,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132920190784)>', '<ExcThread(monitor, started 140132300617472)>']
[2026-03-14 12:12:38] 2026-03-14 16:12:33,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:12:38] 2026-03-14 16:12:33,798 | INFO     | [monitor] control thread has ended
[2026-03-14 12:12:38] 2026-03-14 16:12:38,673 | INFO     | all workflow threads have been joined
[2026-03-14 12:12:38] 2026-03-14 16:12:38,673 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:12:38] 2026-03-14 16:12:38,673 | INFO     | traces error code: 0
[2026-03-14 12:12:38] 2026-03-14 16:12:38,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:12:38] 2026-03-14 16:12:38,769 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:12:38] 2026-03-14 16:12:38,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:12:38] 2026-03-14 16:12:38,774 [wrapper] pilotpid: 2986069
[2026-03-14 12:12:38] 2026-03-14 16:12:38,777 [wrapper] Pilot exit status: 0
[2026-03-14 12:12:38] 2026-03-14 16:12:38,786 [wrapper] pandaids: 7047693613
[2026-03-14 12:12:38] 2026-03-14 16:12:38,821 [wrapper] cleanup supervisor_pilot 3064979 2986070
[2026-03-14 12:12:38] 2026-03-14 16:12:38,824 [wrapper] Test setup, not cleaning
[2026-03-14 12:12:38] 2026-03-14 16:12:38,826 [wrapper] apfmon messages muted
[2026-03-14 12:12:38] 2026-03-14 16:12:38,828 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:12:38] 2026-03-14 16:12:38,830 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:12:38]  *** Error codes and diagnostics ***
[2026-03-14 12:12:38]     "exeErrorCode": 0,
[2026-03-14 12:12:38]     "exeErrorDiag": "",
[2026-03-14 12:12:38]     "pilotErrorCode": 0,
[2026-03-14 12:12:38]     "pilotErrorDiag": "",
[2026-03-14 12:12:38]  *** Listing of results directory ***
[2026-03-14 12:12:38] total 442944
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 16:32 pilot3.tar.gz
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 16:43 queuedata.json
[2026-03-14 12:12:38] -rwx------. 1 boincer umatlas     36322 Mar  9 16:43 runpilot2-wrapper.sh
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas       100 Mar 14 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:12:38] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 10:50 run_atlas
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas       105 Mar 14 10:50 job.xml
[2026-03-14 12:12:38] -rw-r--r--. 2 boincer umatlas 263566046 Mar 14 10:50 EVNT.48958608._000055.pool.root.1
[2026-03-14 12:12:38] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 10:50 start_atlas.sh
[2026-03-14 12:12:38] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 10:50 shared
[2026-03-14 12:12:38] -rw-r--r--. 2 boincer umatlas    597931 Mar 14 10:50 input.tar.gz
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas         0 Mar 14 10:50 boinc_lockfile
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas      2526 Mar 14 10:50 pandaJob.out
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas        57 Mar 14 10:50 setup.sh.local
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas   1004579 Mar 14 10:50 agis_schedconf.cvmfs.json
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas   1511579 Mar 14 10:50 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas       440 Mar 14 10:50 workernode_map.json
[2026-03-14 12:12:38] drwx------. 5 boincer umatlas      4096 Mar 14 10:50 pilot3
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas      6617 Mar 14 12:10 init_data.xml
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas        95 Mar 14 12:11 pilot_heartbeat.json
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas       529 Mar 14 12:11 boinc_task_state.xml
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas 183949973 Mar 14 12:11 HITS.48958610._001400.pool.root.1
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas      1033 Mar 14 12:12 memory_monitor_summary.json
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas    330933 Mar 14 12:12 log.48958610._001400.job.log.tgz.1
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas      6373 Mar 14 12:12 heartbeat.json
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas        27 Mar 14 12:12 wrapper_checkpoint.txt
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 12:12 boinc_mmap_file
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas      4550 Mar 14 12:12 pilotlog.txt
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas    726437 Mar 14 12:12 log.48958610._001400.job.log.1
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas       357 Mar 14 12:12 output.list
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas       620 Mar 14 12:12 runtime_log
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas   1075200 Mar 14 12:12 result.tar.gz
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas      9341 Mar 14 12:12 runtime_log.err
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas       650 Mar 14 12:12 9wfNDmqcwJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmR5aLDm4AWXRo.diag
[2026-03-14 12:12:38] -rw-r--r--. 1 boincer umatlas     21518 Mar 14 12:12 stderr.txt
[2026-03-14 12:12:38] HITS file was successfully produced:
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas 183949973 Mar 14 12:11 shared/HITS.pool.root.1
[2026-03-14 12:12:38]  *** Contents of shared directory: ***
[2026-03-14 12:12:38] total 438692
[2026-03-14 12:12:38] -rw-r--r--. 2 boincer umatlas 263566046 Mar 14 10:50 ATLAS.root_0
[2026-03-14 12:12:38] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 10:50 start_atlas.sh
[2026-03-14 12:12:38] -rw-r--r--. 2 boincer umatlas    597931 Mar 14 10:50 input.tar.gz
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas 183949973 Mar 14 12:11 HITS.pool.root.1
[2026-03-14 12:12:38] -rw-------. 1 boincer umatlas   1075200 Mar 14 12:12 result.tar.gz
12:12:40 (2981883): run_atlas exited; CPU time 39920.197381
12:12:40 (2981883): called boinc_finish(0)

</stderr_txt>
]]>

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