Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:15 (13302): wrapper (7.7.26015): starting
10:31:15 (13302): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 10:31:15] Arguments: --nthreads 12
[2026-03-14 10:31:15] Threads: 12
[2026-03-14 10:31:15] Checking for CVMFS
[2026-03-14 10:31:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:31:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:31:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:31:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:31:16] 2.11.2.0 2979 443325 107264 157280 2 51 17369379 20275200 1 130560 2 191199839 99.958 24482963 16855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 10:31:16] CVMFS is ok
[2026-03-14 10:31:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:31:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:31:16] Further information can be found at the LHC@home message board.
[2026-03-14 10:31:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:31:16] Checking for apptainer binary...
[2026-03-14 10:31:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:31:16] Running /usr/bin/apptainer --version
[2026-03-14 10:31:16] apptainer version 1.3.2-1.el7
[2026-03-14 10:31:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:31:17] c-205-7.aglt2.org
[2026-03-14 10:31:17] apptainer works
[2026-03-14 10:31:18] Set ATHENA_PROC_NUMBER=12
[2026-03-14 10:31:18] Set ATHENA_CORE_NUMBER=12
[2026-03-14 10:31:18] Starting ATLAS job with PandaID=7046284974
[2026-03-14 10:31:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 11:39:51]  *** The last 200 lines of the pilot log: ***
[2026-03-14 11:39:51]  filesize=386081
[2026-03-14 11:39:51]  filetype=log
[2026-03-14 11:39:51]  guid=349ad645-f9ee-4861-a244-cb00f6ed95e7
[2026-03-14 11:39:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 11:39:51]  is_altstaged=None
[2026-03-14 11:39:51]  is_tar=False
[2026-03-14 11:39:51]  lfn=log.48955010._038913.job.log.tgz.1
[2026-03-14 11:39:51]  mtime=0
[2026-03-14 11:39:51]  protocol_id=None
[2026-03-14 11:39:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 11:39:51]  replicas=None
[2026-03-14 11:39:51]  scope=mc23_13p6TeV
[2026-03-14 11:39:51]  status=None
[2026-03-14 11:39:51]  status_code=0
[2026-03-14 11:39:51]  storage_token=
[2026-03-14 11:39:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7046284974/log.48955010._038913.job.log.tgz.1
[2026-03-14 11:39:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/de/log.48955010._038913.job.log.tgz.1
[2026-03-14 11:39:51]  workdir=None
[2026-03-14 11:39:51] ]
[2026-03-14 11:39:51] 2026-03-14 15:38:49,973 | INFO     | transferring file log.48955010._038913.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7046284974/log.48955010._038913.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 11:39:51] 2026-03-14 15:38:49,973 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7046284974/log.48955010._038913.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._038913.job
[2026-03-14 11:39:51] 2026-03-14 15:38:49,995 | INFO     | adding to output.list: log.48955010._038913.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/de/log.48955010._038913.job.log.tg
[2026-03-14 11:39:51] 2026-03-14 15:38:49,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 11:39:51] 2026-03-14 15:38:49,997 | INFO     | summary of transferred files:
[2026-03-14 11:39:51] 2026-03-14 15:38:49,997 | INFO     |  -- lfn=log.48955010._038913.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 11:39:51] 2026-03-14 15:38:49,997 | INFO     | stage-out finished correctly
[2026-03-14 11:39:51] 2026-03-14 15:38:50,864 | INFO     | time since job start (4031s) is within the limit (345600.0s)
[2026-03-14 11:39:51] 2026-03-14 15:38:51,886 | INFO     | monitor loop #308: job 0:7046284974 is in state 'finished'
[2026-03-14 11:39:51] 2026-03-14 15:38:51,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 11:39:51] 2026-03-14 15:38:52,869 | INFO     | time since job start (4033s) is within the limit (345600.0s)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,010 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 11:39:51] 2026-03-14 15:38:53,087 | INFO     | job 7046284974 has state=finished
[2026-03-14 11:39:51] 2026-03-14 15:38:53,088 | INFO     | preparing for final server update for job 7046284974 in state='finished'
[2026-03-14 11:39:51] 2026-03-14 15:38:53,165 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,165 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7046284974/jobReport.json
[2026-03-14 11:39:51] 2026-03-14 15:38:53,167 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 11:39:51] 2026-03-14 15:38:53,167 | INFO     | this job has now completed (state=finished)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,168 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,168 | INFO     | log transfer has been attempted: DONE
[2026-03-14 11:39:51] 2026-03-14 15:38:53,168 | INFO     | job 7046284974 has finished - writing final server update
[2026-03-14 11:39:51] 2026-03-14 15:38:53,168 | INFO     | total number of processed events: 400 (read)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,170 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046284974/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,170 | INFO     | extracted standard info from prmon json
[2026-03-14 11:39:51] 2026-03-14 15:38:53,170 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 11:39:51] 2026-03-14 15:38:53,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 11:39:51] 2026-03-14 15:38:53,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 11:39:51] 2026-03-14 15:38:53,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 11:39:51] 2026-03-14 15:38:53,172 | INFO     | fitting pss+swap vs Time
[2026-03-14 11:39:51] 2026-03-14 15:38:53,172 | INFO     | sum of square deviations: 63666310.0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | sum of deviations: -6968358668.0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | mean x: 1773500797.0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | mean y: 2804642.118644068
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | intersect: 194114724297.58255
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | chi2: 0.049429274478100485
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | current memory leak: -109.45 B/s (using 59 data points, chi2=0.05)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,173 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | ..............................
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . Timing measurements:
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . get job = 0 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . initial setup = 7 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . payload setup = 7 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . stage-in = 0 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . payload execution = 4008 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . stage-out = 0 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,174 | INFO     | . log creation = 0 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,175 | INFO     | ..............................
[2026-03-14 11:39:51] 2026-03-14 15:38:53,250 | INFO     | 
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | job summary report
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | --------------------------------------------------
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | PanDA job id: 7046284974
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | task id: 48955010
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | errors: (none)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 11:39:51] 2026-03-14 15:38:53,251 | INFO     | pilot state: finished 
[2026-03-14 11:39:51] 2026-03-14 15:38:53,252 | INFO     | transexitcode: 0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,252 | INFO     | exeerrorcode: 0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,252 | INFO     | exeerrordiag: 
[2026-03-14 11:39:51] 2026-03-14 15:38:53,252 | INFO     | exitcode: 0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,252 | INFO     | exitmsg: OK
[2026-03-14 11:39:51] 2026-03-14 15:38:53,252 | INFO     | cpuconsumptiontime: 43416 s
[2026-03-14 11:39:51] 2026-03-14 15:38:53,253 | INFO     | nevents: 400
[2026-03-14 11:39:51] 2026-03-14 15:38:53,253 | INFO     | neventsw: 0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,253 | INFO     | pid: 21685
[2026-03-14 11:39:51] 2026-03-14 15:38:53,253 | INFO     | pgrp: 21685
[2026-03-14 11:39:51] 2026-03-14 15:38:53,253 | INFO     | corecount: 12
[2026-03-14 11:39:51] 2026-03-14 15:38:53,253 | INFO     | event service: False
[2026-03-14 11:39:51] 2026-03-14 15:38:53,254 | INFO     | sizes: {0: 2279747, 1: 2280208, 11: 2280208, 4019: 2306065, 4020: 2315063, 4023: 2315441}
[2026-03-14 11:39:51] 2026-03-14 15:38:53,254 | INFO     | --------------------------------------------------
[2026-03-14 11:39:51] 2026-03-14 15:38:53,254 | INFO     | 
[2026-03-14 11:39:51] 2026-03-14 15:38:53,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 11:39:51] 2026-03-14 15:38:53,277 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,277 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,278 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,278 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,280 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,280 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 11:39:51] 2026-03-14 15:38:53,281 | INFO     | job 7046284974 has completed (purged errors)
[2026-03-14 11:39:51] 2026-03-14 15:38:53,281 | INFO     | overall cleanup function is called
[2026-03-14 11:39:51] 2026-03-14 15:38:54,289 | INFO     | --- collectZombieJob: --- 10, [21685]
[2026-03-14 11:39:51] 2026-03-14 15:38:54,289 | INFO     | zombie collector waiting for pid 21685
[2026-03-14 11:39:51] 2026-03-14 15:38:54,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 11:39:51] 2026-03-14 15:38:54,289 | INFO     | collected zombie processes
[2026-03-14 11:39:51] 2026-03-14 15:38:54,289 | INFO     | will attempt to kill all subprocesses of pid=21685
[2026-03-14 11:39:51] 2026-03-14 15:38:54,382 | INFO     | process IDs to be killed: [21685] (in reverse order)
[2026-03-14 11:39:51] 2026-03-14 15:38:54,433 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 11:39:51] 2026-03-14 15:38:54,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 11:39:51] 2026-03-14 15:38:54,437 | INFO     | did not find any defunct processes belonging to 21685
[2026-03-14 11:39:51] 2026-03-14 15:38:54,440 | INFO     | did not find any defunct processes belonging to 21685
[2026-03-14 11:39:51] 2026-03-14 15:38:54,440 | INFO     | ready for new job
[2026-03-14 11:39:51] 2026-03-14 15:38:54,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 11:39:51] 2026-03-14 15:38:54,441 | INFO     | **************************************
[2026-03-14 11:39:51] 2026-03-14 15:38:54,442 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 11:39:51] 2026-03-14 15:38:54,442 | INFO     | **************************************
[2026-03-14 11:39:51] 2026-03-14 15:38:54,442 | INFO     | 
[2026-03-14 11:39:51] 2026-03-14 15:38:54,442 | INFO     | architecture information:
[2026-03-14 11:39:51] 2026-03-14 15:38:54,443 | INFO     | executing command: cat /etc/os-release
[2026-03-14 11:39:51] 2026-03-14 15:38:54,458 | INFO     | cat /etc/os-release:
[2026-03-14 11:39:51] NAME="CentOS Linux"
[2026-03-14 11:39:51] VERSION="7 (Core)"
[2026-03-14 11:39:51] ID="centos"
[2026-03-14 11:39:51] ID_LIKE="rhel fedora"
[2026-03-14 11:39:51] VERSION_ID="7"
[2026-03-14 11:39:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 11:39:51] ANSI_COLOR="0;31"
[2026-03-14 11:39:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 11:39:51] HOME_URL="https://www.centos.org/"
[2026-03-14 11:39:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 11:39:51] 
[2026-03-14 11:39:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 11:39:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 11:39:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 11:39:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 11:39:51] 
[2026-03-14 11:39:51] 2026-03-14 15:38:54,459 | INFO     | **************************************
[2026-03-14 11:39:51] 2026-03-14 15:38:54,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 11:39:51] 2026-03-14 15:38:54,976 | INFO     | sufficient remaining disk space (28897705984 B)
[2026-03-14 11:39:51] 2026-03-14 15:38:54,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 11:39:51] 2026-03-14 15:38:54,977 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 11:39:51] 2026-03-14 15:38:54,977 | INFO     | update_server=False
[2026-03-14 11:39:51] 2026-03-14 15:38:54,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 11:39:51] 2026-03-14 15:38:54,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 11:39:51] 2026-03-14 15:38:54,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:39:51] 2026-03-14 15:38:55,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:39:51] 2026-03-14 15:38:55,406 | INFO     | aborting loop
[2026-03-14 11:39:51] 2026-03-14 15:38:55,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 11:39:51] 2026-03-14 15:38:55,867 | INFO     | all data control threads have been joined
[2026-03-14 11:39:51] 2026-03-14 15:38:55,982 | INFO     | [job] retrieve thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:55,983 | INFO     | [job] queue monitor thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,048 | INFO     | [payload] failed_post thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,146 | INFO     | all payload control threads have been joined
[2026-03-14 11:39:51] 2026-03-14 15:38:56,172 | INFO     | all job control threads have been joined
[2026-03-14 11:39:51] 2026-03-14 15:38:56,287 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,305 | INFO     | [data] copytool_in thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,411 | INFO     | [job] job monitor thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,646 | INFO     | [payload] validate_post thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,873 | INFO     | [data] control thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:56,923 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:57,151 | INFO     | [payload] control thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:57,175 | INFO     | [job] control thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:57,268 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:57,268 | INFO     | [job] validate thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:57,471 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:57,596 | INFO     | [data] copytool_out thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:38:58,984 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 11:39:51] 2026-03-14 15:39:26,070 | INFO     | PID=17304 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 11:39:51] 2026-03-14 15:39:26,070 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 11:39:51] 2026-03-14 15:39:26,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 11:39:51] 2026-03-14 15:39:26,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 11:39:51] 2026-03-14 15:39:44,901 | INFO     | [monitor] cgroup control has ended
[2026-03-14 11:39:51] 2026-03-14 15:39:46,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804165846848)>', '<ExcThread(monitor, started 139802972243712)>']
[2026-03-14 11:39:51] 2026-03-14 15:39:47,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 11:39:51] 2026-03-14 15:39:47,165 | INFO     | [monitor] control thread has ended
[2026-03-14 11:39:51] 2026-03-14 15:39:51,331 | INFO     | all workflow threads have been joined
[2026-03-14 11:39:51] 2026-03-14 15:39:51,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 11:39:51] 2026-03-14 15:39:51,332 | INFO     | traces error code: 0
[2026-03-14 11:39:51] 2026-03-14 15:39:51,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 11:39:51] 2026-03-14 15:39:51,420 [wrapper] ==== pilot stdout END ====
[2026-03-14 11:39:51] 2026-03-14 15:39:51,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 11:39:51] 2026-03-14 15:39:51,427 [wrapper] pilotpid: 17304
[2026-03-14 11:39:51] 2026-03-14 15:39:51,431 [wrapper] Pilot exit status: 0
[2026-03-14 11:39:51] 2026-03-14 15:39:51,446 [wrapper] pandaids: 7046284974
[2026-03-14 11:39:51] 2026-03-14 15:39:51,492 [wrapper] cleanup supervisor_pilot  7721 17305
[2026-03-14 11:39:51] 2026-03-14 15:39:51,496 [wrapper] Test setup, not cleaning
[2026-03-14 11:39:51] 2026-03-14 15:39:51,500 [wrapper] apfmon messages muted
[2026-03-14 11:39:51] 2026-03-14 15:39:51,504 [wrapper] ==== wrapper stdout END ====
[2026-03-14 11:39:51] 2026-03-14 15:39:51,507 [wrapper] ==== wrapper stderr END ====
[2026-03-14 11:39:51]  *** Error codes and diagnostics ***
[2026-03-14 11:39:51]     "exeErrorCode": 0,
[2026-03-14 11:39:51]     "exeErrorDiag": "",
[2026-03-14 11:39:51]     "pilotErrorCode": 0,
[2026-03-14 11:39:51]     "pilotErrorDiag": "",
[2026-03-14 11:39:51]  *** Listing of results directory ***
[2026-03-14 11:39:51] total 619960
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 04:39 pilot3.tar.gz
[2026-03-14 11:39:51] -rwx------ 1 boincer umatlas     36322 Mar 14 04:39 runpilot2-wrapper.sh
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 04:41 queuedata.json
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas       100 Mar 14 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 11:39:51] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 10:31 run_atlas
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas       105 Mar 14 10:31 job.xml
[2026-03-14 11:39:51] -rw-r--r-- 2 boincer umatlas 440586253 Mar 14 10:31 EVNT.46701403._001798.pool.root.1
[2026-03-14 11:39:51] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 10:31 start_atlas.sh
[2026-03-14 11:39:51] drwxrwx--x 2 boincer umatlas      4096 Mar 14 10:31 shared
[2026-03-14 11:39:51] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 10:31 input.tar.gz
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas         0 Mar 14 10:31 boinc_lockfile
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas      2564 Mar 14 10:31 pandaJob.out
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas        57 Mar 14 10:31 setup.sh.local
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas   1004579 Mar 14 10:31 agis_schedconf.cvmfs.json
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas   1511579 Mar 14 10:31 agis_ddmendpoints.agis.ALL.json
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas       444 Mar 14 10:31 workernode_map.json
[2026-03-14 11:39:51] drwx------ 5 boincer umatlas      4096 Mar 14 10:31 pilot3
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas       530 Mar 14 11:38 boinc_task_state.xml
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas 188357314 Mar 14 11:38 HITS.48955010._038913.pool.root.1
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas        95 Mar 14 11:38 pilot_heartbeat.json
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas      1044 Mar 14 11:38 memory_monitor_summary.json
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas    386081 Mar 14 11:38 log.48955010._038913.job.log.tgz.1
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas      6423 Mar 14 11:38 heartbeat.json
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 11:39 init_data.xml
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 11:39 boinc_mmap_file
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas        27 Mar 14 11:39 wrapper_checkpoint.txt
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas      4742 Mar 14 11:39 pilotlog.txt
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas    593638 Mar 14 11:39 log.48955010._038913.job.log.1
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas       357 Mar 14 11:39 output.list
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas       620 Mar 14 11:39 runtime_log
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas    993280 Mar 14 11:39 result.tar.gz
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 11:39 runtime_log.err
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas       658 Mar 14 11:39 G6MMDm5hZL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmafpLDmybPrcn.diag
[2026-03-14 11:39:51] -rw-r--r-- 1 boincer umatlas     21207 Mar 14 11:39 stderr.txt
[2026-03-14 11:39:51] HITS file was successfully produced:
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas 188357314 Mar 14 11:38 shared/HITS.pool.root.1
[2026-03-14 11:39:51]  *** Contents of shared directory: ***
[2026-03-14 11:39:51] total 615784
[2026-03-14 11:39:51] -rw-r--r-- 2 boincer umatlas 440586253 Mar 14 10:31 ATLAS.root_0
[2026-03-14 11:39:51] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 10:31 start_atlas.sh
[2026-03-14 11:39:51] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 10:31 input.tar.gz
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas 188357314 Mar 14 11:38 HITS.pool.root.1
[2026-03-14 11:39:51] -rw------- 1 boincer umatlas    993280 Mar 14 11:39 result.tar.gz
11:39:53 (13302): run_atlas exited; CPU time 43394.981038
11:39:53 (13302): called boinc_finish(0)

</stderr_txt>
]]>

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