Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:03:56 (196777): wrapper (7.7.26015): starting
05:03:56 (196777): wrapper: running run_atlas (--nthreads 2)
[2026-03-16 05:03:56] Arguments: --nthreads 2
[2026-03-16 05:03:56] Threads: 2
[2026-03-16 05:03:56] Checking for CVMFS
[2026-03-16 05:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 05:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 05:04:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 05:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 05:04:06] 2.13.3.0 1801 4932 46560 157338 1 49 3276599 4096001 0 130560 0 608911 99.953 173193 81 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-03-16 05:04:06] CVMFS is ok
[2026-03-16 05:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 05:04:06] Checking for apptainer binary...
[2026-03-16 05:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 05:04:06] Running /usr/bin/apptainer --version
[2026-03-16 05:04:06] apptainer version 1.3.1
[2026-03-16 05:04:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 05:04:06] ahanllin04
[2026-03-16 05:04:06] apptainer works
[2026-03-16 05:04:06] Set ATHENA_PROC_NUMBER=2
[2026-03-16 05:04:06] Set ATHENA_CORE_NUMBER=2
[2026-03-16 05:04:06] Starting ATLAS job with PandaID=7046917593
[2026-03-16 05:04:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 12:17:26]  *** The last 200 lines of the pilot log: ***
[2026-03-16 12:17:27] 2026-03-16 11:16:41,293 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,293 | INFO     | log transfer has been attempted: DONE
[2026-03-16 12:17:27] 2026-03-16 11:16:41,293 | INFO     | job 7046917593 has finished - writing final server update
[2026-03-16 12:17:27] 2026-03-16 11:16:41,294 | INFO     | total number of processed events: 400 (read)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,296 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7046917593/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,297 | INFO     | extracted standard info from prmon json
[2026-03-16 12:17:27] 2026-03-16 11:16:41,297 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 12:17:27] 2026-03-16 11:16:41,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 12:17:27] 2026-03-16 11:16:41,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 12:17:27] 2026-03-16 11:16:41,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 12:17:27] 2026-03-16 11:16:41,307 | INFO     | fitting pss+swap vs Time
[2026-03-16 12:17:27] 2026-03-16 11:16:41,308 | INFO     | sum of square deviations: 23803632402.997627
[2026-03-16 12:17:27] 2026-03-16 11:16:41,313 | INFO     | sum of deviations: -14421921510.668234
[2026-03-16 12:17:27] 2026-03-16 11:16:41,314 | INFO     | mean x: 1773646841.002353
[2026-03-16 12:17:27] 2026-03-16 11:16:41,314 | INFO     | mean y: 2268035.668235294
[2026-03-16 12:17:27] 2026-03-16 11:16:41,314 | INFO     | intersect: 1076868546.0239296
[2026-03-16 12:17:27] 2026-03-16 11:16:41,315 | INFO     | chi2: 2.292006393310496
[2026-03-16 12:17:27] 2026-03-16 11:16:41,315 | INFO     | sum of square deviations: 22973347372.997616
[2026-03-16 12:17:27] 2026-03-16 11:16:41,319 | INFO     | sum of deviations: 9345209077.592836
[2026-03-16 12:17:27] 2026-03-16 11:16:41,319 | INFO     | mean x: 1773646688.5023808
[2026-03-16 12:17:27] 2026-03-16 11:16:41,320 | INFO     | mean y: 2272359.907142857
[2026-03-16 12:17:27] 2026-03-16 11:16:41,320 | INFO     | intersect: -719220196.8683205
[2026-03-16 12:17:27] 2026-03-16 11:16:41,320 | INFO     | chi2: 1.6424318063514725
[2026-03-16 12:17:27] 2026-03-16 11:16:41,320 | INFO     | current chi2=1.6424318063514725 (change=28.340871511304993 %)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,321 | INFO     | sum of square deviations: 22162597592.997646
[2026-03-16 12:17:27] 2026-03-16 11:16:41,325 | INFO     | sum of deviations: 9397930299.961452
[2026-03-16 12:17:27] 2026-03-16 11:16:41,325 | INFO     | mean x: 1773646536.0024097
[2026-03-16 12:17:27] 2026-03-16 11:16:41,325 | INFO     | mean y: 2272370.0385542167
[2026-03-16 12:17:27] 2026-03-16 11:16:41,325 | INFO     | intersect: -749832903.3697047
[2026-03-16 12:17:27] 2026-03-16 11:16:41,326 | INFO     | chi2: 1.6425898229317049
[2026-03-16 12:17:27] 2026-03-16 11:16:41,326 | INFO     | current chi2=1.6425898229317049 (change=-0.009620891389300454 %)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,326 | INFO     | right removable region: 414
[2026-03-16 12:17:27] 2026-03-16 11:16:41,327 | INFO     | sum of square deviations: 22973346762.99762
[2026-03-16 12:17:27] 2026-03-16 11:16:41,332 | INFO     | sum of deviations: -58083473741.49053
[2026-03-16 12:17:27] 2026-03-16 11:16:41,332 | INFO     | mean x: 1773646993.5023808
[2026-03-16 12:17:27] 2026-03-16 11:16:41,333 | INFO     | mean y: 2275985.4904761906
[2026-03-16 12:17:27] 2026-03-16 11:16:41,333 | INFO     | intersect: 4486584677.496086
[2026-03-16 12:17:27] 2026-03-16 11:16:41,333 | INFO     | chi2: 0.9788836742347589
[2026-03-16 12:17:27] 2026-03-16 11:16:41,334 | INFO     | current chi2=0.9788836742347589 (change=57.29140734110726 %)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,335 | INFO     | sum of square deviations: 22162596372.997643
[2026-03-16 12:17:27] 2026-03-16 11:16:41,339 | INFO     | sum of deviations: -34603300341.13012
[2026-03-16 12:17:27] 2026-03-16 11:16:41,340 | INFO     | mean x: 1773647146.0024097
[2026-03-16 12:17:27] 2026-03-16 11:16:41,340 | INFO     | mean y: 2271568.130120482
[2026-03-16 12:17:27] 2026-03-16 11:16:41,340 | INFO     | intersect: 2771533971.2972083
[2026-03-16 12:17:27] 2026-03-16 11:16:41,341 | INFO     | chi2: 0.8663528392592892
[2026-03-16 12:17:27] 2026-03-16 11:16:41,341 | INFO     | current chi2=0.8663528392592892 (change=11.495833257556422 %)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,341 | INFO     | left removable region: 20
[2026-03-16 12:17:27] 2026-03-16 11:16:41,342 | INFO     | sum of square deviations: 18965522536.497547
[2026-03-16 12:17:27] 2026-03-16 11:16:41,345 | INFO     | sum of deviations: 20442523672.532993
[2026-03-16 12:17:27] 2026-03-16 11:16:41,345 | INFO     | mean x: 1773647115.502538
[2026-03-16 12:17:27] 2026-03-16 11:16:41,346 | INFO     | mean y: 2269670.9670050764
[2026-03-16 12:17:27] 2026-03-16 11:16:41,346 | INFO     | intersect: -1909505924.7544084
[2026-03-16 12:17:27] 2026-03-16 11:16:41,347 | INFO     | chi2: 0.003906862347982038
[2026-03-16 12:17:27] 2026-03-16 11:16:41,347 | INFO     | current memory leak: 1.08 B/s (using 394 data points, chi2=0.00)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,348 | INFO     | could have reported an average CPU frequency of 2099 MHz (18 samples)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,348 | INFO     | ..............................
[2026-03-16 12:17:27] 2026-03-16 11:16:41,348 | INFO     | . Timing measurements:
[2026-03-16 12:17:27] 2026-03-16 11:16:41,348 | INFO     | . get job = 0 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,348 | INFO     | . initial setup = 9 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,349 | INFO     | . payload setup = 10 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,349 | INFO     | . stage-in = 0 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,349 | INFO     | . payload execution = 25892 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,349 | INFO     | . stage-out = 1 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,349 | INFO     | . log creation = 0 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,349 | INFO     | ..............................
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | 
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | job summary report
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | --------------------------------------------------
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | PanDA job id: 7046917593
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | task id: 48955010
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | errors: (none)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,470 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | pilot state: finished 
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | transexitcode: 0
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | exeerrorcode: 0
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | exeerrordiag: 
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | exitcode: 0
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | exitmsg: OK
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | cpuconsumptiontime: 50436 s
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | nevents: 400
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | neventsw: 0
[2026-03-16 12:17:27] 2026-03-16 11:16:41,471 | INFO     | pid: 205161
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | pgrp: 205161
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | corecount: 2
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | event service: False
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | sizes: {0: 2279755, 1: 2280216, 11: 2280216, 25908: 2316544, 25911: 2325556, 25912: 2325934}
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | --------------------------------------------------
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | 
[2026-03-16 12:17:27] 2026-03-16 11:16:41,472 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-16 12:17:27] 2026-03-16 11:16:41,526 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,526 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,526 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,526 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,528 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 12:17:27] 2026-03-16 11:16:41,529 | INFO     | job 7046917593 has completed (purged errors)
[2026-03-16 12:17:27] 2026-03-16 11:16:41,529 | INFO     | overall cleanup function is called
[2026-03-16 12:17:27] 2026-03-16 11:16:42,539 | INFO     | --- collectZombieJob: --- 10, [205161]
[2026-03-16 12:17:27] 2026-03-16 11:16:42,540 | INFO     | zombie collector waiting for pid 205161
[2026-03-16 12:17:27] 2026-03-16 11:16:42,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 12:17:27] 2026-03-16 11:16:42,540 | INFO     | collected zombie processes
[2026-03-16 12:17:27] 2026-03-16 11:16:42,540 | INFO     | will attempt to kill all subprocesses of pid=205161
[2026-03-16 12:17:27] 2026-03-16 11:16:42,600 | INFO     | process IDs to be killed: [205161] (in reverse order)
[2026-03-16 12:17:27] 2026-03-16 11:16:42,673 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 12:17:27] 2026-03-16 11:16:42,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 12:17:27] 2026-03-16 11:16:42,675 | INFO     | did not find any defunct processes belonging to 205161
[2026-03-16 12:17:27] 2026-03-16 11:16:42,677 | INFO     | did not find any defunct processes belonging to 205161
[2026-03-16 12:17:27] 2026-03-16 11:16:42,678 | INFO     | ready for new job
[2026-03-16 12:17:27] 2026-03-16 11:16:42,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 12:17:27] 2026-03-16 11:16:42,682 | INFO     | **************************************
[2026-03-16 12:17:27] 2026-03-16 11:16:42,682 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 12:17:27] 2026-03-16 11:16:42,682 | INFO     | **************************************
[2026-03-16 12:17:27] 2026-03-16 11:16:42,683 | INFO     | 
[2026-03-16 12:17:27] 2026-03-16 11:16:42,683 | INFO     | pilot is running in a VM
[2026-03-16 12:17:27] 2026-03-16 11:16:42,683 | INFO     | architecture information:
[2026-03-16 12:17:27] 2026-03-16 11:16:42,684 | INFO     | executing command: cat /etc/os-release
[2026-03-16 12:17:27] 2026-03-16 11:16:42,714 | INFO     | cat /etc/os-release:
[2026-03-16 12:17:27] NAME="CentOS Linux"
[2026-03-16 12:17:27] VERSION="7 (Core)"
[2026-03-16 12:17:27] ID="centos"
[2026-03-16 12:17:27] ID_LIKE="rhel fedora"
[2026-03-16 12:17:27] VERSION_ID="7"
[2026-03-16 12:17:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 12:17:27] ANSI_COLOR="0;31"
[2026-03-16 12:17:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 12:17:27] HOME_URL="https://www.centos.org/"
[2026-03-16 12:17:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 12:17:27] 
[2026-03-16 12:17:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 12:17:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 12:17:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 12:17:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 12:17:27] 
[2026-03-16 12:17:27] 2026-03-16 11:16:42,715 | INFO     | **************************************
[2026-03-16 12:17:27] 2026-03-16 11:16:43,218 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-16 12:17:27] 2026-03-16 11:16:43,248 | INFO     | sufficient remaining disk space (20175650816 B)
[2026-03-16 12:17:27] 2026-03-16 11:16:43,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 12:17:27] 2026-03-16 11:16:43,249 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 12:17:27] 2026-03-16 11:16:43,249 | INFO     | update_server=False
[2026-03-16 12:17:27] 2026-03-16 11:16:43,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 12:17:27] 2026-03-16 11:16:43,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 12:17:27] 2026-03-16 11:16:43,250 | INFO     | aborting loop
[2026-03-16 12:17:27] 2026-03-16 11:16:43,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 12:17:27] 2026-03-16 11:16:43,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 12:17:27] 2026-03-16 11:16:43,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 12:17:27] 2026-03-16 11:16:43,264 | INFO     | all data control threads have been joined
[2026-03-16 12:17:27] 2026-03-16 11:16:43,797 | INFO     | all job control threads have been joined
[2026-03-16 12:17:27] 2026-03-16 11:16:44,255 | INFO     | [job] job monitor thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:44,256 | INFO     | [job] retrieve thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:44,257 | INFO     | [job] queue monitor thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:44,270 | INFO     | [data] control thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:44,370 | INFO     | all payload control threads have been joined
[2026-03-16 12:17:27] 2026-03-16 11:16:44,722 | INFO     | [payload] validate_post thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:44,803 | INFO     | [job] control thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:44,944 | INFO     | [data] copytool_in thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,162 | INFO     | [job] validate thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,257 | INFO     | [data] copytool_out thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,306 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,377 | INFO     | [payload] control thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,399 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,477 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,480 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:45,684 | INFO     | [payload] failed_post thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:16:47,257 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 12:17:27] 2026-03-16 11:17:13,116 | INFO     | PID=200801 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 12:17:27] 2026-03-16 11:17:13,117 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 12:17:27] 2026-03-16 11:17:13,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 12:17:27] 2026-03-16 11:17:13,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 12:17:27] 2026-03-16 11:17:20,501 | INFO     | [monitor] cgroup control has ended
[2026-03-16 12:17:27] 2026-03-16 11:17:20,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126723811886912)>', '<ExcThread(monitor, started 126722741630720)>']
[2026-03-16 12:17:27] 2026-03-16 11:17:21,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 12:17:27] 2026-03-16 11:17:21,160 | INFO     | [monitor] control thread has ended
[2026-03-16 12:17:27] 2026-03-16 11:17:25,866 | INFO     | all workflow threads have been joined
[2026-03-16 12:17:27] 2026-03-16 11:17:25,867 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 12:17:27] 2026-03-16 11:17:25,868 | INFO     | traces error code: 0
[2026-03-16 12:17:27] 2026-03-16 11:17:25,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 12:17:27] 2026-03-16 11:17:26,334 [wrapper] ==== pilot stdout END ====
[2026-03-16 12:17:27] 2026-03-16 11:17:26,349 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 12:17:27] 2026-03-16 11:17:26,375 [wrapper] pilotpid: 200801
[2026-03-16 12:17:27] 2026-03-16 11:17:26,393 [wrapper] Pilot exit status: 0
[2026-03-16 12:17:27] 2026-03-16 11:17:26,455 [wrapper] pandaids: 7046917593
[2026-03-16 12:17:27] 2026-03-16 11:17:26,531 [wrapper] cleanup supervisor_pilot  210777 200802
[2026-03-16 12:17:27] 2026-03-16 11:17:26,540 [wrapper] Test setup, not cleaning
[2026-03-16 12:17:27] 2026-03-16 11:17:26,553 [wrapper] apfmon messages muted
[2026-03-16 12:17:27] 2026-03-16 11:17:26,565 [wrapper] ==== wrapper stdout END ====
[2026-03-16 12:17:27] 2026-03-16 11:17:26,577 [wrapper] ==== wrapper stderr END ====
[2026-03-16 12:17:27]  *** Error codes and diagnostics ***
[2026-03-16 12:17:27]     "exeErrorCode": 0,
[2026-03-16 12:17:27]     "exeErrorDiag": "",
[2026-03-16 12:17:27]     "pilotErrorCode": 0,
[2026-03-16 12:17:27]     "pilotErrorDiag": "",
[2026-03-16 12:17:27]  *** Listing of results directory ***
[2026-03-16 12:17:27] total 616460
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc    585013 Mar 14 14:10 pilot3.tar.gz
[2026-03-16 12:17:27] -rwx------ 1 boinc boinc     36322 Mar 14 14:11 runpilot2-wrapper.sh
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc      5111 Mar 14 14:14 queuedata.json
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc       100 Mar 16 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 12:17:27] -rwxr-xr-x 1 boinc boinc      7986 Mar 16 05:03 run_atlas
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc       105 Mar 16 05:03 job.xml
[2026-03-16 12:17:27] -rw-r--r-- 2 boinc boinc 435019054 Mar 16 05:03 EVNT.46701403._001914.pool.root.1
[2026-03-16 12:17:27] drwxrwx--x 2 boinc boinc      4096 Mar 16 05:03 shared
[2026-03-16 12:17:27] -rw-r--r-- 2 boinc boinc    597525 Mar 16 05:03 input.tar.gz
[2026-03-16 12:17:27] -rw-r--r-- 2 boinc boinc     15845 Mar 16 05:03 start_atlas.sh
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc      6482 Mar 16 05:03 init_data.xml
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc         0 Mar 16 05:03 boinc_setup_complete
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc         0 Mar 16 05:03 boinc_lockfile
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc      2564 Mar 16 05:04 pandaJob.out
[2026-03-16 12:17:27] -rw------- 1 boinc boinc        51 Mar 16 05:04 setup.sh.local
[2026-03-16 12:17:27] -rw------- 1 boinc boinc   1006471 Mar 16 05:04 agis_schedconf.cvmfs.json
[2026-03-16 12:17:27] -rw------- 1 boinc boinc       422 Mar 16 05:04 workernode_map.json
[2026-03-16 12:17:27] drwx------ 5 boinc boinc      4096 Mar 16 05:04 pilot3
[2026-03-16 12:17:27] -rw------- 1 boinc boinc 183944471 Mar 16 12:15 HITS.48955010._044669.pool.root.1
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc       531 Mar 16 12:16 boinc_task_state.xml
[2026-03-16 12:17:27] -rw------- 1 boinc boinc        95 Mar 16 12:16 pilot_heartbeat.json
[2026-03-16 12:17:27] -rw------- 1 boinc boinc      1028 Mar 16 12:16 memory_monitor_summary.json
[2026-03-16 12:17:27] -rw------- 1 boinc boinc   1511579 Mar 16 12:16 agis_ddmendpoints.agis.ALL.json
[2026-03-16 12:17:27] -rw------- 1 boinc boinc    562580 Mar 16 12:16 log.48955010._044669.job.log.tgz.1
[2026-03-16 12:17:27] -rw------- 1 boinc boinc      6354 Mar 16 12:16 heartbeat.json
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc      8192 Mar 16 12:17 boinc_mmap_file
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc        28 Mar 16 12:17 wrapper_checkpoint.txt
[2026-03-16 12:17:27] -rw------- 1 boinc boinc      4812 Mar 16 12:17 pilotlog.txt
[2026-03-16 12:17:27] -rw------- 1 boinc boinc   3612765 Mar 16 12:17 log.48955010._044669.job.log.1
[2026-03-16 12:17:27] -rw------- 1 boinc boinc       357 Mar 16 12:17 output.list
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc       620 Mar 16 12:17 runtime_log
[2026-03-16 12:17:27] -rw------- 1 boinc boinc   4188160 Mar 16 12:17 result.tar.gz
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc      9419 Mar 16 12:17 runtime_log.err
[2026-03-16 12:17:27] -rw------- 1 boinc boinc       659 Mar 16 12:17 lDQLDmDxdL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhQqLDmeazn3m.diag
[2026-03-16 12:17:27] -rw-r--r-- 1 boinc boinc     20806 Mar 16 12:17 stderr.txt
[2026-03-16 12:17:27] HITS file was successfully produced:
[2026-03-16 12:17:27] -rw------- 1 boinc boinc 183944471 Mar 16 12:15 shared/HITS.pool.root.1
[2026-03-16 12:17:27]  *** Contents of shared directory: ***
[2026-03-16 12:17:27] total 609160
[2026-03-16 12:17:27] -rw-r--r-- 2 boinc boinc 435019054 Mar 16 05:03 ATLAS.root_0
[2026-03-16 12:17:27] -rw-r--r-- 2 boinc boinc    597525 Mar 16 05:03 input.tar.gz
[2026-03-16 12:17:27] -rw-r--r-- 2 boinc boinc     15845 Mar 16 05:03 start_atlas.sh
[2026-03-16 12:17:27] -rw------- 1 boinc boinc 183944471 Mar 16 12:15 HITS.pool.root.1
[2026-03-16 12:17:27] -rw------- 1 boinc boinc   4188160 Mar 16 12:17 result.tar.gz
12:17:28 (196777): run_atlas exited; CPU time 50629.128670
12:17:28 (196777): called boinc_finish(0)

</stderr_txt>
]]>

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