Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:41 (785138): wrapper (7.7.26015): starting
16:39:41 (785138): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 16:39:41] Arguments: --nthreads 4
[2026-03-15 16:39:41] Threads: 4
[2026-03-15 16:39:41] Checking for CVMFS
[2026-03-15 16:39:41] No cvmfs_config command found, will try listing directly
[2026-03-15 16:39:41] CVMFS is ok
[2026-03-15 16:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:39:41] Further information can be found at the LHC@home message board.
[2026-03-15 16:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:39:41] Checking for apptainer binary...
[2026-03-15 16:39:41] which: no apptainer in ((null))
[2026-03-15 16:39:41] apptainer is not installed, using version from CVMFS
[2026-03-15 16:39:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:39:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-15 16:39:41] apptainer works
[2026-03-15 16:39:41] Set ATHENA_PROC_NUMBER=4
[2026-03-15 16:39:41] Set ATHENA_CORE_NUMBER=4
[2026-03-15 16:39:41] Starting ATLAS job with PandaID=7046914939
[2026-03-15 16:39:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 17:57:07]  *** The last 200 lines of the pilot log: ***
[2026-03-15 17:57:07]  is_altstaged=None
[2026-03-15 17:57:07]  is_tar=False
[2026-03-15 17:57:07]  lfn=log.48955010._044336.job.log.tgz.1
[2026-03-15 17:57:07]  mtime=0
[2026-03-15 17:57:07]  protocol_id=None
[2026-03-15 17:57:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 17:57:07]  replicas=None
[2026-03-15 17:57:07]  scope=mc23_13p6TeV
[2026-03-15 17:57:07]  status=None
[2026-03-15 17:57:07]  status_code=0
[2026-03-15 17:57:07]  storage_token=
[2026-03-15 17:57:07]  surl=/var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7046914939/log.48955010._044336.job.log.tgz.1
[2026-03-15 17:57:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/db/log.48955010._044336.job.log.tgz.1
[2026-03-15 17:57:07]  workdir=None
[2026-03-15 17:57:07] ]
[2026-03-15 17:57:07] 2026-03-15 16:56:06,621 | INFO     | transferring file log.48955010._044336.job.log.tgz.1 from /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7046914939/log.48955010._044336.job.log.tgz.1 to /var/lib/
[2026-03-15 17:57:07] 2026-03-15 16:56:06,621 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7046914939/log.48955010._044336.job.log.tgz.1 /var/lib/boinc/var/slot164/slots/0/
[2026-03-15 17:57:07] 2026-03-15 16:56:06,636 | INFO     | adding to output.list: log.48955010._044336.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/db/log.48955010._044336.job.log.tg
[2026-03-15 17:57:07] 2026-03-15 16:56:06,637 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 17:57:07] 2026-03-15 16:56:06,637 | INFO     | summary of transferred files:
[2026-03-15 17:57:07] 2026-03-15 16:56:06,637 | INFO     |  -- lfn=log.48955010._044336.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 17:57:07] 2026-03-15 16:56:06,637 | INFO     | stage-out finished correctly
[2026-03-15 17:57:07] 2026-03-15 16:56:07,769 | INFO     | monitor loop #332: job 0:7046914939 is in state 'finished'
[2026-03-15 17:57:07] 2026-03-15 16:56:07,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 17:57:07] 2026-03-15 16:56:08,061 | INFO     | time since job start (4575s) is within the limit (345600.0s)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,066 | INFO     | time since job start (4577s) is within the limit (345600.0s)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,077 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 17:57:07] 2026-03-15 16:56:10,129 | INFO     | job 7046914939 has state=finished
[2026-03-15 17:57:07] 2026-03-15 16:56:10,129 | INFO     | preparing for final server update for job 7046914939 in state='finished'
[2026-03-15 17:57:07] 2026-03-15 16:56:10,129 | INFO     | reading metadata from: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7046914939/jobReport.json
[2026-03-15 17:57:07] 2026-03-15 16:56:10,131 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot164/slots/0/workernode_map.json
[2026-03-15 17:57:07] 2026-03-15 16:56:10,131 | INFO     | this job has now completed (state=finished)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,131 | INFO     | log transfer has been attempted: DONE
[2026-03-15 17:57:07] 2026-03-15 16:56:10,131 | INFO     | job 7046914939 has finished - writing final server update
[2026-03-15 17:57:07] 2026-03-15 16:56:10,131 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1216359/.job.ad'
[2026-03-15 17:57:07] 2026-03-15 16:56:10,132 | INFO     | total number of processed events: 400 (read)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,150 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7046914939/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,150 | INFO     | extracted standard info from prmon json
[2026-03-15 17:57:07] 2026-03-15 16:56:10,150 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 17:57:07] 2026-03-15 16:56:10,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 17:57:07] 2026-03-15 16:56:10,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 17:57:07] 2026-03-15 16:56:10,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | fitting pss+swap vs Time
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | sum of square deviations: 97479037.0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | sum of deviations: 296051727.0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | mean x: 1773591562.5
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | mean y: 2333936.088235294
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | intersect: -5384207224.251228
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | chi2: 0.00031275836778625485
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | current memory leak: 3.04 B/s (using 68 data points, chi2=0.00)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,152 | INFO     | could have reported an average CPU frequency of 3602 MHz (6 samples)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | ..............................
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . Timing measurements:
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . get job = 0 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . initial setup = 4 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . payload setup = 4 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . stage-in = 0 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . payload execution = 4552 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . stage-out = 0 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | . log creation = 0 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,153 | INFO     | ..............................
[2026-03-15 17:57:07] 2026-03-15 16:56:10,200 | INFO     | 
[2026-03-15 17:57:07] 2026-03-15 16:56:10,200 | INFO     | job summary report
[2026-03-15 17:57:07] 2026-03-15 16:56:10,200 | INFO     | --------------------------------------------------
[2026-03-15 17:57:07] 2026-03-15 16:56:10,200 | INFO     | PanDA job id: 7046914939
[2026-03-15 17:57:07] 2026-03-15 16:56:10,200 | INFO     | task id: 48955010
[2026-03-15 17:57:07] 2026-03-15 16:56:10,200 | INFO     | errors: (none)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | pilot state: finished 
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | transexitcode: 0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | exeerrorcode: 0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | exeerrordiag: 
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | exitcode: 0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | exitmsg: OK
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | cpuconsumptiontime: 17335 s
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | nevents: 400
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | neventsw: 0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | pid: 806899
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | pgrp: 806899
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | corecount: 4
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | event service: False
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | sizes: {0: 2280191, 11: 2280191, 4560: 2306393, 4561: 2315470, 4565: 2315664}
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | --------------------------------------------------
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | 
[2026-03-15 17:57:07] 2026-03-15 16:56:10,201 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-15 17:57:07] 2026-03-15 16:56:10,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | job 7046914939 has completed (purged errors)
[2026-03-15 17:57:07] 2026-03-15 16:56:10,218 | INFO     | overall cleanup function is called
[2026-03-15 17:57:07] 2026-03-15 16:56:11,225 | INFO     | --- collectZombieJob: --- 10, [806899]
[2026-03-15 17:57:07] 2026-03-15 16:56:11,225 | INFO     | zombie collector waiting for pid 806899
[2026-03-15 17:57:07] 2026-03-15 16:56:11,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 17:57:07] 2026-03-15 16:56:11,225 | INFO     | collected zombie processes
[2026-03-15 17:57:07] 2026-03-15 16:56:11,225 | INFO     | will attempt to kill all subprocesses of pid=806899
[2026-03-15 17:57:07] 2026-03-15 16:56:11,697 | INFO     | process IDs to be killed: [806899] (in reverse order)
[2026-03-15 17:57:07] 2026-03-15 16:56:11,928 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 17:57:07] 2026-03-15 16:56:11,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 17:57:07] 2026-03-15 16:56:11,957 | INFO     | did not find any defunct processes belonging to 806899
[2026-03-15 17:57:07] 2026-03-15 16:56:11,986 | INFO     | did not find any defunct processes belonging to 806899
[2026-03-15 17:57:07] 2026-03-15 16:56:11,986 | INFO     | ready for new job
[2026-03-15 17:57:07] 2026-03-15 16:56:11,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 17:57:07] 2026-03-15 16:56:11,988 | INFO     | **************************************
[2026-03-15 17:57:07] 2026-03-15 16:56:11,988 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 17:57:07] 2026-03-15 16:56:11,988 | INFO     | **************************************
[2026-03-15 17:57:07] 2026-03-15 16:56:11,988 | INFO     | 
[2026-03-15 17:57:07] 2026-03-15 16:56:11,993 | INFO     | architecture information:
[2026-03-15 17:57:07] 2026-03-15 16:56:11,993 | INFO     | executing command: cat /etc/os-release
[2026-03-15 17:57:07] 2026-03-15 16:56:12,010 | INFO     | cat /etc/os-release:
[2026-03-15 17:57:07] NAME="CentOS Linux"
[2026-03-15 17:57:07] VERSION="7 (Core)"
[2026-03-15 17:57:07] ID="centos"
[2026-03-15 17:57:07] ID_LIKE="rhel fedora"
[2026-03-15 17:57:07] VERSION_ID="7"
[2026-03-15 17:57:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 17:57:07] ANSI_COLOR="0;31"
[2026-03-15 17:57:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 17:57:07] HOME_URL="https://www.centos.org/"
[2026-03-15 17:57:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 17:57:07] 
[2026-03-15 17:57:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 17:57:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 17:57:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 17:57:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 17:57:07] 
[2026-03-15 17:57:07] 2026-03-15 16:56:12,010 | INFO     | **************************************
[2026-03-15 17:57:07] 2026-03-15 16:56:12,513 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-15 17:57:07] 2026-03-15 16:56:12,532 | INFO     | sufficient remaining disk space (139691294720 B)
[2026-03-15 17:57:07] 2026-03-15 16:56:12,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 17:57:07] 2026-03-15 16:56:12,532 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 17:57:07] 2026-03-15 16:56:12,532 | INFO     | update_server=False
[2026-03-15 17:57:07] 2026-03-15 16:56:12,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 17:57:07] 2026-03-15 16:56:12,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 17:57:07] 2026-03-15 16:56:12,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 17:57:07] 2026-03-15 16:56:12,736 | INFO     | all payload control threads have been joined
[2026-03-15 17:57:07] 2026-03-15 16:56:12,780 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 17:57:07] 2026-03-15 16:56:12,780 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 17:57:07] 2026-03-15 16:56:12,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:57:07] 2026-03-15 16:56:12,780 | INFO     | will abort loop
[2026-03-15 17:57:07] 2026-03-15 16:56:13,365 | INFO     | all data control threads have been joined
[2026-03-15 17:57:07] 2026-03-15 16:56:13,412 | INFO     | all job control threads have been joined
[2026-03-15 17:57:07] 2026-03-15 16:56:13,538 | INFO     | [job] retrieve thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:13,586 | INFO     | [payload] validate_post thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:13,741 | INFO     | [payload] control thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:13,786 | INFO     | [job] job monitor thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:13,935 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,156 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,172 | INFO     | [job] validate thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,185 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,370 | INFO     | [data] control thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,417 | INFO     | [job] control thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,450 | INFO     | [data] copytool_in thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,537 | INFO     | [data] copytool_out thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:14,679 | INFO     | [payload] failed_post thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:15,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:57:07] 2026-03-15 16:56:16,215 | INFO     | [job] queue monitor thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:16,538 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:22,890 | INFO     | job.realtimelogging is not enabled
[2026-03-15 17:57:07] 2026-03-15 16:56:23,896 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 17:57:07] 2026-03-15 16:56:43,695 | INFO     | PID=796176 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 17:57:07] 2026-03-15 16:56:43,695 | INFO     | .. there are 48 such processes running
[2026-03-15 17:57:07] 2026-03-15 16:56:43,696 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 17:57:07] 2026-03-15 16:56:43,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 17:57:07] 2026-03-15 16:56:43,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 17:57:07] 2026-03-15 16:57:00,921 | INFO     | [monitor] cgroup control has ended
[2026-03-15 17:57:07] 2026-03-15 16:57:02,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22888567510848)>', '<ExcThread(monitor, started 22888326637312)>']
[2026-03-15 17:57:07] 2026-03-15 16:57:02,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 17:57:07] 2026-03-15 16:57:02,791 | INFO     | [monitor] control thread has ended
[2026-03-15 17:57:07] 2026-03-15 16:57:07,483 | INFO     | all workflow threads have been joined
[2026-03-15 17:57:07] 2026-03-15 16:57:07,483 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 17:57:07] 2026-03-15 16:57:07,483 | INFO     | traces error code: 0
[2026-03-15 17:57:07] 2026-03-15 16:57:07,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 17:57:07] 2026-03-15 16:57:07,628 [wrapper] ==== pilot stdout END ====
[2026-03-15 17:57:07] 2026-03-15 16:57:07,630 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 17:57:07] 2026-03-15 16:57:07,631 [wrapper] pilotpid: 796176
[2026-03-15 17:57:07] 2026-03-15 16:57:07,632 [wrapper] Pilot exit status: 0
[2026-03-15 17:57:07] 2026-03-15 16:57:07,637 [wrapper] pandaids: 7046914939
[2026-03-15 17:57:07] 2026-03-15 16:57:07,783 [wrapper] cleanup supervisor_pilot 1582939 796177
[2026-03-15 17:57:07] 2026-03-15 16:57:07,785 [wrapper] Test setup, not cleaning
[2026-03-15 17:57:07] 2026-03-15 16:57:07,788 [wrapper] apfmon messages muted
[2026-03-15 17:57:07] 2026-03-15 16:57:07,790 [wrapper] ==== wrapper stdout END ====
[2026-03-15 17:57:07] 2026-03-15 16:57:07,792 [wrapper] ==== wrapper stderr END ====
[2026-03-15 17:57:07]  *** Error codes and diagnostics ***
[2026-03-15 17:57:07]     "exeErrorCode": 0,
[2026-03-15 17:57:07]     "exeErrorDiag": "",
[2026-03-15 17:57:07]     "pilotErrorCode": 0,
[2026-03-15 17:57:07]     "pilotErrorDiag": "",
[2026-03-15 17:57:07]  *** Listing of results directory ***
[2026-03-15 17:57:07] total 609048
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc    585013 Mar 14 14:10 pilot3.tar.gz
[2026-03-15 17:57:07] -rwx------. 1 boinc boinc     36322 Mar 14 14:11 runpilot2-wrapper.sh
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc      5111 Mar 14 14:14 queuedata.json
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 17:57:07] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:39 run_atlas
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:39 job.xml
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc      6710 Mar 15 16:39 init_data.xml
[2026-03-15 17:57:07] -rw-r--r--. 2 boinc boinc 436595811 Mar 15 16:39 EVNT.46701403._001908.pool.root.1
[2026-03-15 17:57:07] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:39 start_atlas.sh
[2026-03-15 17:57:07] drwxrwx--x. 2 boinc boinc      4096 Mar 15 16:39 shared
[2026-03-15 17:57:07] -rw-r--r--. 2 boinc boinc    597533 Mar 15 16:39 input.tar.gz
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:39 boinc_lockfile
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc      2563 Mar 15 16:39 pandaJob.out
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc   1006473 Mar 15 16:39 agis_schedconf.cvmfs.json
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc   1511579 Mar 15 16:39 agis_ddmendpoints.agis.ALL.json
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc       445 Mar 15 16:39 workernode_map.json
[2026-03-15 17:57:07] drwx------. 5 boinc boinc      4096 Mar 15 16:39 pilot3
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc 181273443 Mar 15 17:55 HITS.48955010._044336.pool.root.1
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc       530 Mar 15 17:56 boinc_task_state.xml
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc      1030 Mar 15 17:56 memory_monitor_summary.json
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc    262130 Mar 15 17:56 log.48955010._044336.job.log.tgz.1
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc      6370 Mar 15 17:56 heartbeat.json
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc        95 Mar 15 17:56 pilot_heartbeat.json
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc        27 Mar 15 17:56 wrapper_checkpoint.txt
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc      8192 Mar 15 17:56 boinc_mmap_file
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc      5088 Mar 15 17:57 pilotlog.txt
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc    672910 Mar 15 17:57 log.48955010._044336.job.log.1
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc       357 Mar 15 17:57 output.list
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc       620 Mar 15 17:57 runtime_log
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc    952320 Mar 15 17:57 result.tar.gz
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc      9221 Mar 15 17:57 runtime_log.err
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc       662 Mar 15 17:57 4Z6KDmwwdL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDPqLDmn0tyMm.diag
[2026-03-15 17:57:07] -rw-r--r--. 1 boinc boinc      8246 Mar 15 17:57 stderr.txt
[2026-03-15 17:57:07] HITS file was successfully produced:
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc 181273443 Mar 15 17:55 shared/HITS.pool.root.1
[2026-03-15 17:57:07]  *** Contents of shared directory: ***
[2026-03-15 17:57:07] total 604932
[2026-03-15 17:57:07] -rw-r--r--. 2 boinc boinc 436595811 Mar 15 16:39 ATLAS.root_0
[2026-03-15 17:57:07] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:39 start_atlas.sh
[2026-03-15 17:57:07] -rw-r--r--. 2 boinc boinc    597533 Mar 15 16:39 input.tar.gz
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc 181273443 Mar 15 17:55 HITS.pool.root.1
[2026-03-15 17:57:07] -rw-------. 1 boinc boinc    952320 Mar 15 17:57 result.tar.gz
17:57:09 (785138): run_atlas exited; CPU time 17528.902485
17:57:09 (785138): called boinc_finish(0)

</stderr_txt>
]]>

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