Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-14 16:33:22 (23632): vboxwrapper version 26210
2026-03-14 16:33:22 (23632): BOINC client version: 8.2.8
2026-03-14 16:33:23 (23632): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2026-03-14 16:33:23 (23632): Successfully copied 'init_data.xml' to the shared directory.
2026-03-14 16:33:24 (23632): Create VM. (boinc_99dc9c72d9cf861f, slot#11)
2026-03-14 16:33:24 (23632): Setting Memory Size for VM. (4800MB)
2026-03-14 16:33:26 (23632): Setting CPU Count for VM. (8)
2026-03-14 16:33:26 (23632): Setting Chipset Options for VM.
2026-03-14 16:33:26 (23632): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-14 16:33:26 (23632): Setting Boot Options for VM.
2026-03-14 16:33:27 (23632): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-14 16:33:27 (23632): Enabling VM Network Access.
2026-03-14 16:33:27 (23632): Disabling USB Support for VM.
2026-03-14 16:33:28 (23632): Disabling COM Port Support for VM.
2026-03-14 16:33:28 (23632): Disabling LPT Port Support for VM.
2026-03-14 16:33:28 (23632): Disabling Audio Support for VM.
2026-03-14 16:33:28 (23632): Disabling Clipboard Support for VM.
2026-03-14 16:33:29 (23632): Disabling Drag and Drop Support for VM.
2026-03-14 16:33:29 (23632): Adding storage controller(s) to VM.
2026-03-14 16:33:29 (23632): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-14 16:33:33 (23632): Adding VirtualBox Guest Additions to VM.
2026-03-14 16:33:33 (23632): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-14 16:33:33 (23632): forwarding host port 57228 to guest port 80
2026-03-14 16:33:33 (23632): Enabling remote desktop for VM.
2026-03-14 16:33:34 (23632): Required extension pack not installed, remote desktop not enabled.
2026-03-14 16:33:34 (23632): Enabling shared directory for VM.
2026-03-14 16:33:34 (23632): Starting VM using VBoxManage interface. (boinc_99dc9c72d9cf861f, slot#11)
2026-03-14 16:33:49 (23632): Successfully started VM. (PID = '26480')
2026-03-14 16:33:49 (23632): Reporting VM Process ID to BOINC.
2026-03-14 16:33:49 (23632): Guest Log: BIOS: VirtualBox 7.0.10
2026-03-14 16:33:49 (23632): Guest Log: CPUID EDX: 0x178bfbff
2026-03-14 16:33:49 (23632): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-14 16:33:49 (23632): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-14 16:33:49 (23632): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-14 16:33:49 (23632): Detected: Web Application Enabled (http://localhost:57228)
2026-03-14 16:33:49 (23632): Preference change detected
2026-03-14 16:33:49 (23632): Setting CPU throttle for VM. (60%)
2026-03-14 16:33:49 (23632): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-14 16:33:51 (23632): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-14 16:33:51 (23632): Guest Log: BIOS: Booting from Hard Disk...
2026-03-14 16:33:57 (23632): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-14 16:33:57 (23632): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-14 16:33:57 (23632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-14 16:34:11 (23632): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-14 16:34:11 (23632): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-14 16:34:36 (23632): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000397 main     Log opened 2026-03-14T16:34:34.500951000Z
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000656 main     OS Product: Linux
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000732 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000855 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000919 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000920 main     Process ID: 1372
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.000921 main     Package type: LINUX_64BITS_GENERIC
2026-03-14 16:34:36 (23632): Guest Log: 00:00:00.002425 main     5.2.32 r132073 started. Verbose level = 0
2026-03-14 16:34:36 (23632): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-14 16:34:36 (23632): Guest Log: [INFO] Mounting shared directory
2026-03-14 16:34:36 (23632): Guest Log: [INFO] Checking for init_data.xml
2026-03-14 16:34:46 (23632): Guest Log: 00:00:10.007122 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 551 342 000ns (GuestNow=1 773 520 486 057 986 000 ns GuestLast=1 773 506 074 506 644 000 ns fSetTimeLastLoop=true )
2026-03-14 16:35:30 (23632): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-14 16:35:30 (23632): Guest Log: [INFO] Detected branch: prod
2026-03-14 16:35:30 (23632): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-14 16:35:30 (23632): Guest Log: Copying input files
2026-03-14 16:35:43 (23632): Guest Log: Copied input files into RunAtlas.
2026-03-14 16:35:43 (23632): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-14 16:35:43 (23632): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-14 16:35:43 (23632): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-14 16:35:43 (23632): Guest Log: Further information can be found at the LHC@home message board.
2026-03-14 16:36:13 (23632): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-14 16:36:14 (23632): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-14 16:36:14 (23632): Guest Log: 2.6.3.0 1673 0 32196 157289 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-14 16:36:15 (23632): Guest Log: copied the webapp to /var/www
2026-03-14 16:36:15 (23632): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-14 16:36:15 (23632): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-14 16:36:16 (23632): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-14 16:36:16 (23632): Guest Log:  *** Starting ATLAS job. (PandaID=7046912754 taskID=48955010) ***
2026-03-14 18:13:57 (23632): Status Report: Elapsed Time: '6000.000000'
2026-03-14 18:13:57 (23632): Status Report: CPU Time: '25001.328125'
2026-03-14 18:42:10 (23632): Preference change detected
2026-03-14 18:42:10 (23632): Setting CPU throttle for VM. (60%)
2026-03-14 18:42:11 (23632): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-14 19:54:03 (23632): Status Report: Elapsed Time: '12000.000000'
2026-03-14 19:54:03 (23632): Status Report: CPU Time: '54001.187500'
2026-03-14 20:42:06 (23632): Guest Log:  *** Job finished ***
2026-03-14 20:42:06 (23632): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:41:31,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:41:31,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:41:58,623 | INFO     | [monitor] cgroup control has ended
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:41:59,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689353074496)>', '<ExcThread(monitor, started 139688610346752)>']
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:00,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:00,444 | INFO     | [monitor] control thread has ended
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,715 | INFO     | all workflow threads have been joined
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,715 | INFO     | end of generic workflow (traces error code: 0)
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,715 | INFO     | traces error code: 0
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,830 [wrapper] ==== pilot stdout END ====
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,836 [wrapper] ==== wrapper stdout RESUME ====
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,842 [wrapper] pilotpid: 6118
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,849 [wrapper] Pilot exit status: 0
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,918 [wrapper] pandaids: 7046912754
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,970 [wrapper] cleanup supervisor_pilot 28701 6119
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,978 [wrapper] Test setup, not cleaning
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,988 [wrapper] apfmon messages muted
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:04,994 [wrapper] ==== wrapper stdout END ====
2026-03-14 20:42:06 (23632): Guest Log: 2026-03-15 00:42:05,000 [wrapper] ==== wrapper stderr END ====
2026-03-14 20:42:06 (23632): Guest Log:  *** Error codes and diagnostics ***
2026-03-14 20:42:06 (23632): Guest Log:     "exeErrorCode": 0,
2026-03-14 20:42:06 (23632): Guest Log:     "exeErrorDiag": "",
2026-03-14 20:42:06 (23632): Guest Log:     "pilotErrorCode": 0,
2026-03-14 20:42:06 (23632): Guest Log:     "pilotErrorDiag": "",
2026-03-14 20:42:06 (23632): Guest Log:  *** Listing of results directory ***
2026-03-14 20:42:06 (23632): Guest Log: total 189916
2026-03-14 20:42:06 (23632): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 14 13:10 pilot3.tar.gz
2026-03-14 20:42:06 (23632): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 14 13:10 runpilot2-wrapper.sh
2026-03-14 20:42:06 (23632): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 14 13:12 queuedata.json
2026-03-14 20:42:06 (23632): Guest Log: -rwxr-xr-x. 1 atlas atlas      8583 Mar 14 20:35 init_data.xml
2026-03-14 20:42:06 (23632): Guest Log: -rwxr-xr-x. 1 atlas atlas    597530 Mar 14 20:35 input.tar.gz
2026-03-14 20:42:06 (23632): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 14 20:35 start_atlas.sh
2026-03-14 20:42:06 (23632): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 14 20:35 EVNT.46701403._001894.pool.root.1 -> /data/./ATLAS.root_0
2026-03-14 20:42:06 (23632): Guest Log: -rw-r--r--. 1 atlas atlas      2564 Mar 14 20:36 pandaJob.out
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas   1006481 Mar 14 20:37 agis_schedconf.cvmfs.json
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas       429 Mar 14 20:37 workernode_map.json
2026-03-14 20:42:06 (23632): Guest Log: drwx------. 5 atlas atlas      4096 Mar 14 20:37 pilot3
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas 185827551 Mar 15 00:39 HITS.48955010._043697.pool.root.1
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas      1034 Mar 15 00:40 memory_monitor_summary.json
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas        95 Mar 15 00:40 pilot_heartbeat.json
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 15 00:40 agis_ddmendpoints.agis.ALL.json
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas    472118 Mar 15 00:40 log.48955010._043697.job.log.tgz.1
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas      6389 Mar 15 00:40 heartbeat.json
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 15 00:42 pilotlog.txt
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas   1913866 Mar 15 00:42 log.48955010._043697.job.log.1
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas       357 Mar 15 00:42 output.list
2026-03-14 20:42:06 (23632): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 15 00:42 runtime_log
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas   2406400 Mar 15 00:42 result.tar.gz
2026-03-14 20:42:06 (23632): Guest Log: -rw-r--r--. 1 atlas atlas      8785 Mar 15 00:42 runtime_log.err
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas       671 Mar 15 00:42 rpxKDmUwdL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWKqLDmIF3TRo.diag
2026-03-14 20:42:06 (23632): Guest Log: Looking for outputfile HITS.48955010._043697.pool.root.1
2026-03-14 20:42:06 (23632): Guest Log: HITS file was successfully produced
2026-03-14 20:42:06 (23632): Guest Log: -rw-------. 1 atlas atlas 185827551 Mar 15 00:39 /home/atlas/RunAtlas/HITS.48955010._043697.pool.root.1
2026-03-14 20:42:08 (23632): Guest Log: Successfully finished the ATLAS job!
2026-03-14 20:42:08 (23632): Guest Log: Copying the results back to the shared directory!
2026-03-14 20:42:08 (23632): Guest Log:  *** Contents of shared directory: ***
2026-03-14 20:42:08 (23632): Guest Log: total 618304
2026-03-14 20:42:08 (23632): Guest Log: -rwxrwxrwx. 1 root root 444274989 Mar 14 20:33 ATLAS.root_0
2026-03-14 20:42:08 (23632): Guest Log: -rwxrwxrwx. 1 root root 185827551 Mar 15 00:42 HITS.pool.root.1
2026-03-14 20:42:08 (23632): Guest Log: -rwxrwxrwx. 1 root root      8583 Mar 14 20:33 init_data.xml
2026-03-14 20:42:08 (23632): Guest Log: -rwxrwxrwx. 1 root root    597530 Mar 14 16:47 input.tar.gz
2026-03-14 20:42:08 (23632): Guest Log: -rwxrwxrwx. 1 root root   2406400 Mar 15 00:42 result.tar.gz
2026-03-14 20:42:08 (23632): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 14 16:47 start_atlas.sh
2026-03-14 20:42:08 (23632): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-14 20:42:08 (23632): VM Completion File Detected.
2026-03-14 20:42:08 (23632): Powering off VM.
2026-03-14 20:42:09 (23632): Successfully stopped VM.
2026-03-14 20:42:09 (23632): Deregistering VM. (boinc_99dc9c72d9cf861f, slot#11)
2026-03-14 20:42:09 (23632): Removing network bandwidth throttle group from VM.
2026-03-14 20:42:10 (23632): Removing VM from VirtualBox.
2026-03-14 20:42:15 (23632): called boinc_finish(0)

</stderr_txt>
]]>

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