Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:40:06 (23928): wrapper (7.7.26015): starting
12:40:06 (23928): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 12:40:06] Arguments: --nthreads 12
[2026-03-14 12:40:06] Threads: 12
[2026-03-14 12:40:06] Checking for CVMFS
[2026-03-14 12:40:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 12:40:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 12:40:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 12:40:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 12:40:06] 2.11.2.0 2913 443454 92576 157284 2 51 18775427 20275200 1 130560 1 192404104 99.951 25905297 16973 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 12:40:06] CVMFS is ok
[2026-03-14 12:40:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 12:40:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 12:40:06] Further information can be found at the LHC@home message board.
[2026-03-14 12:40:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 12:40:06] Checking for apptainer binary...
[2026-03-14 12:40:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 12:40:06] Running /usr/bin/apptainer --version
[2026-03-14 12:40:06] apptainer version 1.3.2-1.el7
[2026-03-14 12:40:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 12:40:07] c-205-6.aglt2.org
[2026-03-14 12:40:07] apptainer works
[2026-03-14 12:40:07] Set ATHENA_PROC_NUMBER=12
[2026-03-14 12:40:07] Set ATHENA_CORE_NUMBER=12
[2026-03-14 12:40:07] Starting ATLAS job with PandaID=7046914161
[2026-03-14 12:40:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:44:38]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:44:38]  filetype=log
[2026-03-14 13:44:38]  guid=5c1a1907-c266-4d1e-9128-53c9ca4d5c42
[2026-03-14 13:44:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 13:44:38]  is_altstaged=None
[2026-03-14 13:44:38]  is_tar=False
[2026-03-14 13:44:38]  lfn=log.48955010._044029.job.log.tgz.1
[2026-03-14 13:44:38]  mtime=0
[2026-03-14 13:44:38]  protocol_id=None
[2026-03-14 13:44:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 13:44:38]  replicas=None
[2026-03-14 13:44:38]  scope=mc23_13p6TeV
[2026-03-14 13:44:38]  status=None
[2026-03-14 13:44:38]  status_code=0
[2026-03-14 13:44:38]  storage_token=
[2026-03-14 13:44:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7046914161/log.48955010._044029.job.log.tgz.1
[2026-03-14 13:44:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/1f/log.48955010._044029.job.log.tgz.1
[2026-03-14 13:44:38]  workdir=None
[2026-03-14 13:44:38] ]
[2026-03-14 13:44:38] 2026-03-14 17:43:44,758 | INFO     | transferring file log.48955010._044029.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7046914161/log.48955010._044029.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 13:44:38] 2026-03-14 17:43:44,758 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7046914161/log.48955010._044029.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._044029.job
[2026-03-14 13:44:38] 2026-03-14 17:43:44,781 | INFO     | adding to output.list: log.48955010._044029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/1f/log.48955010._044029.job.log.tg
[2026-03-14 13:44:38] 2026-03-14 17:43:44,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 13:44:38] 2026-03-14 17:43:44,782 | INFO     | summary of transferred files:
[2026-03-14 13:44:38] 2026-03-14 17:43:44,782 | INFO     |  -- lfn=log.48955010._044029.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 13:44:38] 2026-03-14 17:43:44,782 | INFO     | stage-out finished correctly
[2026-03-14 13:44:38] 2026-03-14 17:43:45,319 | INFO     | time since job start (3798s) is within the limit (345600.0s)
[2026-03-14 13:44:38] 2026-03-14 17:43:46,620 | WARNING  | process 31988 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 13:44:38] 2026-03-14 17:43:46,621 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046914161/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:44:38] 2026-03-14 17:43:46,703 | INFO     | number of running child processes to parent process 31988: 1
[2026-03-14 13:44:38] 2026-03-14 17:43:46,703 | INFO     | maximum number of monitored processes: 6
[2026-03-14 13:44:38] 2026-03-14 17:43:46,999 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 13:44:38] 2026-03-14 17:43:47,325 | INFO     | time since job start (3800s) is within the limit (345600.0s)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,279 | INFO     | job 7046914161 has state=finished
[2026-03-14 13:44:38] 2026-03-14 17:43:48,279 | INFO     | preparing for final server update for job 7046914161 in state='finished'
[2026-03-14 13:44:38] 2026-03-14 17:43:48,279 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7046914161/jobReport.json
[2026-03-14 13:44:38] 2026-03-14 17:43:48,282 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 13:44:38] 2026-03-14 17:43:48,282 | INFO     | this job has now completed (state=finished)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,283 | INFO     | log transfer has been attempted: DONE
[2026-03-14 13:44:38] 2026-03-14 17:43:48,283 | INFO     | job 7046914161 has finished - writing final server update
[2026-03-14 13:44:38] 2026-03-14 17:43:48,283 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,286 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046914161/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,287 | INFO     | extracted standard info from prmon json
[2026-03-14 13:44:38] 2026-03-14 17:43:48,287 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:44:38] 2026-03-14 17:43:48,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:44:38] 2026-03-14 17:43:48,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:44:38] 2026-03-14 17:43:48,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:44:38] 2026-03-14 17:43:48,289 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:44:38] 2026-03-14 17:43:48,289 | INFO     | sum of square deviations: 51573060.0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,289 | INFO     | sum of deviations: -5657712668.000001
[2026-03-14 13:44:38] 2026-03-14 17:43:48,289 | INFO     | mean x: 1773508403.0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | mean y: 2829187.9454545453
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | intersect: 194561789979.83084
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | chi2: 0.04763509072361894
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | current memory leak: -109.70 B/s (using 55 data points, chi2=0.05)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | ..............................
[2026-03-14 13:44:38] 2026-03-14 17:43:48,290 | INFO     | . Timing measurements:
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . get job = 0 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . initial setup = 7 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . payload setup = 7 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . stage-in = 0 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . payload execution = 3774 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . stage-out = 0 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | . log creation = 0 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,291 | INFO     | ..............................
[2026-03-14 13:44:38] 2026-03-14 17:43:48,380 | INFO     | 
[2026-03-14 13:44:38] 2026-03-14 17:43:48,381 | INFO     | job summary report
[2026-03-14 13:44:38] 2026-03-14 17:43:48,385 | INFO     | --------------------------------------------------
[2026-03-14 13:44:38] 2026-03-14 17:43:48,385 | INFO     | PanDA job id: 7046914161
[2026-03-14 13:44:38] 2026-03-14 17:43:48,385 | INFO     | task id: 48955010
[2026-03-14 13:44:38] 2026-03-14 17:43:48,385 | INFO     | errors: (none)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,385 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | pilot state: finished 
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | transexitcode: 0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | exeerrorcode: 0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | exeerrordiag: 
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | exitcode: 0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | exitmsg: OK
[2026-03-14 13:44:38] 2026-03-14 17:43:48,386 | INFO     | cpuconsumptiontime: 40951 s
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | nevents: 400
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | neventsw: 0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | pid: 31988
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | pgrp: 31988
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | corecount: 12
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | event service: False
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | sizes: {0: 2279974, 1: 2280180, 11: 2280208, 3785: 2305981, 3786: 2314979, 3788: 2315035, 3789: 2315357}
[2026-03-14 13:44:38] 2026-03-14 17:43:48,387 | INFO     | --------------------------------------------------
[2026-03-14 13:44:38] 2026-03-14 17:43:48,388 | INFO     | 
[2026-03-14 13:44:38] 2026-03-14 17:43:48,388 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 13:44:38] 2026-03-14 17:43:48,410 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:44:38] 2026-03-14 17:43:48,414 | INFO     | job 7046914161 has completed (purged errors)
[2026-03-14 13:44:38] 2026-03-14 17:43:48,414 | INFO     | overall cleanup function is called
[2026-03-14 13:44:38] 2026-03-14 17:43:49,422 | INFO     | --- collectZombieJob: --- 10, [31988]
[2026-03-14 13:44:38] 2026-03-14 17:43:49,422 | INFO     | zombie collector waiting for pid 31988
[2026-03-14 13:44:38] 2026-03-14 17:43:49,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:44:38] 2026-03-14 17:43:49,422 | INFO     | collected zombie processes
[2026-03-14 13:44:38] 2026-03-14 17:43:49,422 | INFO     | will attempt to kill all subprocesses of pid=31988
[2026-03-14 13:44:38] 2026-03-14 17:43:49,507 | INFO     | process IDs to be killed: [31988] (in reverse order)
[2026-03-14 13:44:38] 2026-03-14 17:43:49,560 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:44:38] 2026-03-14 17:43:49,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:44:38] 2026-03-14 17:43:49,563 | INFO     | did not find any defunct processes belonging to 31988
[2026-03-14 13:44:38] 2026-03-14 17:43:49,566 | INFO     | did not find any defunct processes belonging to 31988
[2026-03-14 13:44:38] 2026-03-14 17:43:49,566 | INFO     | ready for new job
[2026-03-14 13:44:38] 2026-03-14 17:43:49,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:44:38] 2026-03-14 17:43:49,568 | INFO     | **************************************
[2026-03-14 13:44:38] 2026-03-14 17:43:49,568 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:44:38] 2026-03-14 17:43:49,568 | INFO     | **************************************
[2026-03-14 13:44:38] 2026-03-14 17:43:49,568 | INFO     | 
[2026-03-14 13:44:38] 2026-03-14 17:43:49,569 | INFO     | architecture information:
[2026-03-14 13:44:38] 2026-03-14 17:43:49,570 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:44:38] 2026-03-14 17:43:49,585 | INFO     | cat /etc/os-release:
[2026-03-14 13:44:38] NAME="CentOS Linux"
[2026-03-14 13:44:38] VERSION="7 (Core)"
[2026-03-14 13:44:38] ID="centos"
[2026-03-14 13:44:38] ID_LIKE="rhel fedora"
[2026-03-14 13:44:38] VERSION_ID="7"
[2026-03-14 13:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:44:38] ANSI_COLOR="0;31"
[2026-03-14 13:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:44:38] HOME_URL="https://www.centos.org/"
[2026-03-14 13:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:44:38] 
[2026-03-14 13:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:44:38] 
[2026-03-14 13:44:38] 2026-03-14 17:43:49,585 | INFO     | **************************************
[2026-03-14 13:44:38] 2026-03-14 17:43:50,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 13:44:38] 2026-03-14 17:43:50,106 | INFO     | sufficient remaining disk space (28900851712 B)
[2026-03-14 13:44:38] 2026-03-14 17:43:50,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:44:38] 2026-03-14 17:43:50,106 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:44:38] 2026-03-14 17:43:50,107 | INFO     | update_server=False
[2026-03-14 13:44:38] 2026-03-14 17:43:50,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:44:38] 2026-03-14 17:43:50,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:44:38] 2026-03-14 17:43:50,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:44:38] 2026-03-14 17:43:50,212 | INFO     | aborting loop
[2026-03-14 13:44:38] 2026-03-14 17:43:50,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:44:38] 2026-03-14 17:43:50,536 | INFO     | all data control threads have been joined
[2026-03-14 13:44:38] 2026-03-14 17:43:50,644 | INFO     | all job control threads have been joined
[2026-03-14 13:44:38] 2026-03-14 17:43:51,079 | INFO     | all payload control threads have been joined
[2026-03-14 13:44:38] 2026-03-14 17:43:51,112 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,113 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,206 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,217 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,315 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,322 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,542 | INFO     | [data] control thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,564 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,603 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:51,649 | INFO     | [job] control thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:52,085 | INFO     | [payload] control thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:52,344 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:52,379 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:52,448 | INFO     | [job] validate thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:52,562 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:43:53,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:44:38] 2026-03-14 17:43:57,091 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:44:38] 2026-03-14 17:44:20,501 | INFO     | PID=27612 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 13:44:38] 2026-03-14 17:44:20,502 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:44:38] 2026-03-14 17:44:20,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:44:38] 2026-03-14 17:44:20,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:44:38] 2026-03-14 17:44:33,290 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:44:38] 2026-03-14 17:44:33,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375210981184)>', '<ExcThread(monitor, started 140373951244032)>']
[2026-03-14 13:44:38] 2026-03-14 17:44:33,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:44:38] 2026-03-14 17:44:33,569 | INFO     | [monitor] control thread has ended
[2026-03-14 13:44:38] 2026-03-14 17:44:38,424 | INFO     | all workflow threads have been joined
[2026-03-14 13:44:38] 2026-03-14 17:44:38,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:44:38] 2026-03-14 17:44:38,424 | INFO     | traces error code: 0
[2026-03-14 13:44:38] 2026-03-14 17:44:38,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:44:38] 2026-03-14 17:44:38,517 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:44:38] 2026-03-14 17:44:38,522 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:44:38] 2026-03-14 17:44:38,525 [wrapper] pilotpid: 27612
[2026-03-14 13:44:38] 2026-03-14 17:44:38,529 [wrapper] Pilot exit status: 0
[2026-03-14 13:44:38] 2026-03-14 17:44:38,545 [wrapper] pandaids: 7046914161
[2026-03-14 13:44:38] 2026-03-14 17:44:38,588 [wrapper] cleanup supervisor_pilot 18308 27613
[2026-03-14 13:44:38] 2026-03-14 17:44:38,592 [wrapper] Test setup, not cleaning
[2026-03-14 13:44:38] 2026-03-14 17:44:38,597 [wrapper] apfmon messages muted
[2026-03-14 13:44:38] 2026-03-14 17:44:38,600 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:44:38] 2026-03-14 17:44:38,604 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:44:38]  *** Error codes and diagnostics ***
[2026-03-14 13:44:38]     "exeErrorCode": 0,
[2026-03-14 13:44:38]     "exeErrorDiag": "",
[2026-03-14 13:44:38]     "pilotErrorCode": 0,
[2026-03-14 13:44:38]     "pilotErrorDiag": "",
[2026-03-14 13:44:38]  *** Listing of results directory ***
[2026-03-14 13:44:38] total 611540
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 09:10 pilot3.tar.gz
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 09:10 queuedata.json
[2026-03-14 13:44:38] -rwx------ 1 boincer umatlas     36322 Mar 14 09:11 runpilot2-wrapper.sh
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas       100 Mar 14 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:44:38] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 12:40 run_atlas
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas       105 Mar 14 12:40 job.xml
[2026-03-14 13:44:38] -rw-r--r-- 2 boincer umatlas 444447192 Mar 14 12:40 EVNT.46701403._001901.pool.root.1
[2026-03-14 13:44:38] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 12:40 start_atlas.sh
[2026-03-14 13:44:38] drwxrwx--x 2 boincer umatlas      4096 Mar 14 12:40 shared
[2026-03-14 13:44:38] -rw-r--r-- 2 boincer umatlas    597530 Mar 14 12:40 input.tar.gz
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas         0 Mar 14 12:40 boinc_lockfile
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas      2564 Mar 14 12:40 pandaJob.out
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas        57 Mar 14 12:40 setup.sh.local
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas   1004579 Mar 14 12:40 agis_schedconf.cvmfs.json
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas   1511579 Mar 14 12:40 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas       433 Mar 14 12:40 workernode_map.json
[2026-03-14 13:44:38] drwx------ 5 boincer umatlas      4096 Mar 14 12:40 pilot3
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 13:36 init_data.xml
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas 175984338 Mar 14 13:43 HITS.48955010._044029.pool.root.1
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas       530 Mar 14 13:43 boinc_task_state.xml
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas      1044 Mar 14 13:43 memory_monitor_summary.json
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas    364307 Mar 14 13:43 log.48955010._044029.job.log.tgz.1
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas      6406 Mar 14 13:43 heartbeat.json
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 13:44 boinc_mmap_file
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas        27 Mar 14 13:44 wrapper_checkpoint.txt
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas        95 Mar 14 13:44 pilot_heartbeat.json
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas      4742 Mar 14 13:44 pilotlog.txt
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas    562990 Mar 14 13:44 log.48955010._044029.job.log.1
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas       357 Mar 14 13:44 output.list
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas       620 Mar 14 13:44 runtime_log
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas    942080 Mar 14 13:44 result.tar.gz
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 13:44 runtime_log.err
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas       658 Mar 14 13:44 1WmNDmrwdL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmu4sLDmH8yY7n.diag
[2026-03-14 13:44:38] -rw-r--r-- 1 boincer umatlas     21325 Mar 14 13:44 stderr.txt
[2026-03-14 13:44:38] HITS file was successfully produced:
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas 175984338 Mar 14 13:43 shared/HITS.pool.root.1
[2026-03-14 13:44:38]  *** Contents of shared directory: ***
[2026-03-14 13:44:38] total 607416
[2026-03-14 13:44:38] -rw-r--r-- 2 boincer umatlas 444447192 Mar 14 12:40 ATLAS.root_0
[2026-03-14 13:44:38] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 12:40 start_atlas.sh
[2026-03-14 13:44:38] -rw-r--r-- 2 boincer umatlas    597530 Mar 14 12:40 input.tar.gz
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas 175984338 Mar 14 13:43 HITS.pool.root.1
[2026-03-14 13:44:38] -rw------- 1 boincer umatlas    942080 Mar 14 13:44 result.tar.gz
13:44:39 (23928): run_atlas exited; CPU time 40929.583733
13:44:39 (23928): called boinc_finish(0)

</stderr_txt>
]]>

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