Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
07:43:03 (2125749): wrapper (7.7.26015): starting
07:43:03 (2125749): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 07:43:03] Arguments: --nthreads 4
[2026-03-14 07:43:03] Threads: 4
[2026-03-14 07:43:03] Checking for CVMFS
[2026-03-14 07:43:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 07:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 07:43:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 07:43:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 07:43:05] 2.13.3.0 8639 5732 50780 157276 2 50 3261475 4096000 1314 130560 0 5120691 99.992 206970 532 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-14 07:43:05] CVMFS is ok
[2026-03-14 07:43:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 07:43:05] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-14 07:43:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-14 07:43:05] Further information can be found at the LHC@home message board.
[2026-03-14 07:43:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 07:43:05] Checking for apptainer binary...
[2026-03-14 07:43:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 07:43:05] Running /usr/bin/apptainer --version
[2026-03-14 07:43:05] apptainer version 1.4.5
[2026-03-14 07:43:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 07:43:05] SETI64-Ubuntu
[2026-03-14 07:43:05] apptainer works
[2026-03-14 07:43:05] Set ATHENA_PROC_NUMBER=4
[2026-03-14 07:43:05] Set ATHENA_CORE_NUMBER=4
[2026-03-14 07:43:05] Starting ATLAS job with PandaID=7046197826
[2026-03-14 07:43:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/96 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 10:19:58]  *** The last 200 lines of the pilot log: ***
[2026-03-14 10:19:58] 2026-03-14 14:19:24,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 10:19:58] 2026-03-14 14:19:24,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 10:19:58] 2026-03-14 14:19:24,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 10:19:58] 2026-03-14 14:19:24,511 | INFO     | fitting pss+swap vs Time
[2026-03-14 10:19:58] 2026-03-14 14:19:24,512 | INFO     | sum of square deviations: 1110539892.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,513 | INFO     | sum of deviations: 9086361933.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,513 | INFO     | mean x: 1773493269.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,513 | INFO     | mean y: 2308814.882352941
[2026-03-14 10:19:58] 2026-03-14 14:19:24,513 | INFO     | intersect: -14508292599.761227
[2026-03-14 10:19:58] 2026-03-14 14:19:24,513 | INFO     | chi2: 1.325607050852221
[2026-03-14 10:19:58] 2026-03-14 14:19:24,513 | INFO     | sum of square deviations: 1005179777.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,514 | INFO     | sum of deviations: 8853832159.5
[2026-03-14 10:19:58] 2026-03-14 14:19:24,514 | INFO     | mean x: 1773493116.5
[2026-03-14 10:19:58] 2026-03-14 14:19:24,515 | INFO     | mean y: 2308476.25
[2026-03-14 10:19:58] 2026-03-14 14:19:24,515 | INFO     | intersect: -15618987085.807034
[2026-03-14 10:19:58] 2026-03-14 14:19:24,515 | INFO     | chi2: 1.32691765914332
[2026-03-14 10:19:58] 2026-03-14 14:19:24,515 | INFO     | current chi2=1.32691765914332 (change=-0.09886853651362149 %)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,515 | INFO     | right removable region: 147
[2026-03-14 10:19:58] 2026-03-14 14:19:24,515 | INFO     | sum of square deviations: 1005179777.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,516 | INFO     | sum of deviations: -8371831143.500001
[2026-03-14 10:19:58] 2026-03-14 14:19:24,516 | INFO     | mean x: 1773493421.5
[2026-03-14 10:19:58] 2026-03-14 14:19:24,516 | INFO     | mean y: 2333591.993243243
[2026-03-14 10:19:58] 2026-03-14 14:19:24,517 | INFO     | intersect: 14773211198.801756
[2026-03-14 10:19:58] 2026-03-14 14:19:24,517 | INFO     | chi2: 0.031894782358081304
[2026-03-14 10:19:58] 2026-03-14 14:19:24,517 | INFO     | current chi2=0.031894782358081304 (change=97.59394895059012 %)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,517 | INFO     | sum of square deviations: 906703512.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,518 | INFO     | sum of deviations: -6418954116.000001
[2026-03-14 10:19:58] 2026-03-14 14:19:24,518 | INFO     | mean x: 1773493574.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,518 | INFO     | mean y: 2330565.090909091
[2026-03-14 10:19:58] 2026-03-14 14:19:24,518 | INFO     | intersect: 12557673878.382116
[2026-03-14 10:19:58] 2026-03-14 14:19:24,518 | INFO     | chi2: 0.029371373987687317
[2026-03-14 10:19:58] 2026-03-14 14:19:24,518 | INFO     | current chi2=0.029371373987687317 (change=7.91166511833752 %)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,519 | INFO     | left removable region: 20
[2026-03-14 10:19:58] 2026-03-14 14:19:24,519 | INFO     | sum of square deviations: 635130048.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,519 | INFO     | sum of deviations: -1735156041.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,519 | INFO     | mean x: 1773493696.0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,520 | INFO     | mean y: 2322768.559055118
[2026-03-14 10:19:58] 2026-03-14 14:19:24,520 | INFO     | intersect: 4847453793.268214
[2026-03-14 10:19:58] 2026-03-14 14:19:24,520 | INFO     | chi2: 0.015174767119512126
[2026-03-14 10:19:58] 2026-03-14 14:19:24,520 | INFO     | current memory leak: -2.73 B/s (using 127 data points, chi2=0.02)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,520 | INFO     | could have reported an average CPU frequency of 2471 MHz (9 samples)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | ..............................
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . Timing measurements:
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . get job = 0 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . initial setup = 8 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . payload setup = 7 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . stage-in = 0 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . payload execution = 9334 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . stage-out = 0 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | . log creation = 0 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,521 | INFO     | ..............................
[2026-03-14 10:19:58] 2026-03-14 14:19:24,616 | INFO     | 
[2026-03-14 10:19:58] 2026-03-14 14:19:24,616 | INFO     | job summary report
[2026-03-14 10:19:58] 2026-03-14 14:19:24,616 | INFO     | --------------------------------------------------
[2026-03-14 10:19:58] 2026-03-14 14:19:24,616 | INFO     | PanDA job id: 7046197826
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | task id: 48955015
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | errors: (none)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | pilot state: finished 
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | transexitcode: 0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | exeerrorcode: 0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | exeerrordiag: 
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | exitcode: 0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | exitmsg: OK
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | cpuconsumptiontime: 36250 s
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | nevents: 400
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | neventsw: 0
[2026-03-14 10:19:58] 2026-03-14 14:19:24,617 | INFO     | pid: 2135326
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | pgrp: 2135326
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | corecount: 4
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | event service: False
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | sizes: {0: 2279818, 1: 2280279, 12: 2280279, 9342: 2308642, 9343: 2317670, 9344: 2317726, 9345: 2318112}
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | --------------------------------------------------
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | 
[2026-03-14 10:19:58] 2026-03-14 14:19:24,618 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/96
[2026-03-14 10:19:58] 2026-03-14 14:19:24,645 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,647 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 10:19:58] 2026-03-14 14:19:24,648 | INFO     | job 7046197826 has completed (purged errors)
[2026-03-14 10:19:58] 2026-03-14 14:19:24,648 | INFO     | overall cleanup function is called
[2026-03-14 10:19:58] 2026-03-14 14:19:25,656 | INFO     | --- collectZombieJob: --- 10, [2135326]
[2026-03-14 10:19:58] 2026-03-14 14:19:25,657 | INFO     | zombie collector waiting for pid 2135326
[2026-03-14 10:19:58] 2026-03-14 14:19:25,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 10:19:58] 2026-03-14 14:19:25,657 | INFO     | collected zombie processes
[2026-03-14 10:19:58] 2026-03-14 14:19:25,657 | INFO     | will attempt to kill all subprocesses of pid=2135326
[2026-03-14 10:19:58] 2026-03-14 14:19:26,041 | INFO     | process IDs to be killed: [2135326] (in reverse order)
[2026-03-14 10:19:58] 2026-03-14 14:19:26,152 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 10:19:58] 2026-03-14 14:19:26,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 10:19:58] 2026-03-14 14:19:26,162 | INFO     | did not find any defunct processes belonging to 2135326
[2026-03-14 10:19:58] 2026-03-14 14:19:26,171 | INFO     | did not find any defunct processes belonging to 2135326
[2026-03-14 10:19:58] 2026-03-14 14:19:26,172 | INFO     | ready for new job
[2026-03-14 10:19:58] 2026-03-14 14:19:26,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 10:19:58] 2026-03-14 14:19:26,174 | INFO     | **************************************
[2026-03-14 10:19:58] 2026-03-14 14:19:26,174 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 10:19:58] 2026-03-14 14:19:26,174 | INFO     | **************************************
[2026-03-14 10:19:58] 2026-03-14 14:19:26,174 | INFO     | 
[2026-03-14 10:19:58] 2026-03-14 14:19:26,179 | INFO     | architecture information:
[2026-03-14 10:19:58] 2026-03-14 14:19:26,179 | INFO     | executing command: cat /etc/os-release
[2026-03-14 10:19:58] 2026-03-14 14:19:26,197 | INFO     | cat /etc/os-release:
[2026-03-14 10:19:58] NAME="CentOS Linux"
[2026-03-14 10:19:58] VERSION="7 (Core)"
[2026-03-14 10:19:58] ID="centos"
[2026-03-14 10:19:58] ID_LIKE="rhel fedora"
[2026-03-14 10:19:58] VERSION_ID="7"
[2026-03-14 10:19:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 10:19:58] ANSI_COLOR="0;31"
[2026-03-14 10:19:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 10:19:58] HOME_URL="https://www.centos.org/"
[2026-03-14 10:19:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 10:19:58] 
[2026-03-14 10:19:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 10:19:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 10:19:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 10:19:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 10:19:58] 
[2026-03-14 10:19:58] 2026-03-14 14:19:26,198 | INFO     | **************************************
[2026-03-14 10:19:58] 2026-03-14 14:19:26,700 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/96
[2026-03-14 10:19:58] 2026-03-14 14:19:26,726 | INFO     | sufficient remaining disk space (370299371520 B)
[2026-03-14 10:19:58] 2026-03-14 14:19:26,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 10:19:58] 2026-03-14 14:19:26,727 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 10:19:58] 2026-03-14 14:19:26,727 | INFO     | update_server=False
[2026-03-14 10:19:58] 2026-03-14 14:19:26,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 10:19:58] 2026-03-14 14:19:26,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 10:19:58] 2026-03-14 14:19:26,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 10:19:58] 2026-03-14 14:19:26,886 | INFO     | all payload control threads have been joined
[2026-03-14 10:19:58] 2026-03-14 14:19:27,395 | INFO     | all job control threads have been joined
[2026-03-14 10:19:58] 2026-03-14 14:19:27,732 | INFO     | [job] retrieve thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:27,756 | INFO     | all data control threads have been joined
[2026-03-14 10:19:58] 2026-03-14 14:19:27,890 | INFO     | [payload] control thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:27,971 | INFO     | [job] validate thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,301 | INFO     | [payload] validate_post thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,338 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,401 | INFO     | [job] control thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,558 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,609 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,732 | INFO     | [data] copytool_out thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,762 | INFO     | [data] control thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:28,866 | INFO     | [data] copytool_in thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:29,025 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:29,308 | INFO     | [payload] failed_post thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:29,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 10:19:58] 2026-03-14 14:19:30,631 | INFO     | [job] queue monitor thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:30,735 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:32,135 | WARNING  | process 2135326 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 10:19:58] 2026-03-14 14:19:32,442 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/96/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 10:19:58] 2026-03-14 14:19:32,442 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/96/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 10:19:58] 2026-03-14 14:19:32,443 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 10:19:58] 2026-03-14 14:19:32,443 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 10:19:58] 2026-03-14 14:19:32,443 | INFO     | skipping file size check of payload stdout file (/home/whitlerd/Desktop/BOINC/slots/96/PanDA_Pilot-7046197826/payload.stdout) since it has not been created yet
[2026-03-14 10:19:58] 2026-03-14 14:19:32,443 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/96
[2026-03-14 10:19:58] 2026-03-14 14:19:32,464 | INFO     | sufficient remaining disk space (370299371520 B)
[2026-03-14 10:19:58] 2026-03-14 14:19:32,464 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 10:19:58] 2026-03-14 14:19:32,464 | INFO     | output file size check: skipping output file /home/whitlerd/Desktop/BOINC/slots/96/PanDA_Pilot-7046197826/HITS.48955015._023787.pool.root.1 since it does not exist
[2026-03-14 10:19:58] 2026-03-14 14:19:32,899 | INFO     | number of running child processes to parent process 2135326: 1
[2026-03-14 10:19:58] 2026-03-14 14:19:32,900 | INFO     | maximum number of monitored processes: 6
[2026-03-14 10:19:58] 2026-03-14 14:19:32,900 | INFO     | aborting job monitoring since job object (job id=7046197826) has expired
[2026-03-14 10:19:58] 2026-03-14 14:19:32,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 10:19:58] 2026-03-14 14:19:32,900 | INFO     | will abort loop
[2026-03-14 10:19:58] 2026-03-14 14:19:33,904 | INFO     | [job] job monitor thread has finished
[2026-03-14 10:19:58] 2026-03-14 14:19:42,879 | INFO     | [monitor] cgroup control has ended
[2026-03-14 10:19:58] 2026-03-14 14:19:43,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128885199218496)>', '<ExcThread(monitor, started 128884569790208)>']
[2026-03-14 10:19:58] 2026-03-14 14:19:48,279 | INFO     | all workflow threads have been joined
[2026-03-14 10:19:58] 2026-03-14 14:19:48,280 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 10:19:58] 2026-03-14 14:19:48,280 | INFO     | traces error code: 0
[2026-03-14 10:19:58] 2026-03-14 14:19:48,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 10:19:58] 2026-03-14 14:19:57,850 | INFO     | PID=2130335 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 10:19:58] 2026-03-14 14:19:57,850 | INFO     | .. there are 4 such processes running
[2026-03-14 10:19:58] 2026-03-14 14:19:57,851 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 10:19:58] 2026-03-14 14:19:57,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 10:19:58] 2026-03-14 14:19:57,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 10:19:58] 2026-03-14 14:19:57,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 10:19:58] 2026-03-14 14:19:57,851 | CRITICAL | thread 'MainThread' is not alive
[2026-03-14 10:19:58] 2026-03-14 14:19:57,852 | INFO     | [monitor] control thread has ended
[2026-03-14 10:19:58] 2026-03-14 14:19:58,032 [wrapper] ==== pilot stdout END ====
[2026-03-14 10:19:58] 2026-03-14 14:19:58,035 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 10:19:58] 2026-03-14 14:19:58,039 [wrapper] pilotpid: 2130335
[2026-03-14 10:19:58] 2026-03-14 14:19:58,043 [wrapper] Pilot exit status: 0
[2026-03-14 10:19:58] 2026-03-14 14:19:58,059 [wrapper] pandaids: 7046197826
[2026-03-14 10:19:58] 2026-03-14 14:19:58,178 [wrapper] cleanup supervisor_pilot 2188630 2130336
[2026-03-14 10:19:58] 2026-03-14 14:19:58,182 [wrapper] Test setup, not cleaning
[2026-03-14 10:19:58] 2026-03-14 14:19:58,185 [wrapper] apfmon messages muted
[2026-03-14 10:19:58] 2026-03-14 14:19:58,189 [wrapper] ==== wrapper stdout END ====
[2026-03-14 10:19:58] 2026-03-14 14:19:58,193 [wrapper] ==== wrapper stderr END ====
[2026-03-14 10:19:58]  *** Error codes and diagnostics ***
[2026-03-14 10:19:58]     "exeErrorCode": 0,
[2026-03-14 10:19:58]     "exeErrorDiag": "",
[2026-03-14 10:19:58]     "pilotErrorCode": 0,
[2026-03-14 10:19:58]     "pilotErrorDiag": "",
[2026-03-14 10:19:58]  *** Listing of results directory ***
[2026-03-14 10:19:58] total 618676
[2026-03-14 10:19:58] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 14 00:19 pilot3.tar.gz
[2026-03-14 10:19:58] -rwx------ 1 whitlerd whitlerd     36322 Mar 14 00:24 runpilot2-wrapper.sh
[2026-03-14 10:19:58] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 14 00:25 queuedata.json
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 14 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 10:19:58] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 14 07:43 run_atlas
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 14 07:43 job.xml
[2026-03-14 10:19:58] -rw-r--r-- 2 whitlerd whitlerd 441210919 Mar 14 07:43 EVNT.46701403._002533.pool.root.1
[2026-03-14 10:19:58] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 07:43 start_atlas.sh
[2026-03-14 10:19:58] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 14 07:43 shared
[2026-03-14 10:19:58] -rw-r--r-- 2 whitlerd whitlerd    597536 Mar 14 07:43 input.tar.gz
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar 14 07:43 init_data.xml
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 07:43 boinc_setup_complete
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 07:43 boinc_lockfile
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd      2571 Mar 14 07:43 pandaJob.out
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd   1004579 Mar 14 07:43 agis_schedconf.cvmfs.json
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd   1511579 Mar 14 07:43 agis_ddmendpoints.agis.ALL.json
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd       421 Mar 14 07:43 workernode_map.json
[2026-03-14 10:19:58] drwx------ 5 whitlerd whitlerd      4096 Mar 14 07:43 pilot3
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd 185053887 Mar 14 10:18 HITS.48955015._023787.pool.root.1
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 14 10:19 boinc_task_state.xml
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd      1029 Mar 14 10:19 memory_monitor_summary.json
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd    329416 Mar 14 10:19 log.48955015._023787.job.log.tgz.1
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd      6286 Mar 14 10:19 heartbeat.json
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 14 10:19 boinc_mmap_file
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd        95 Mar 14 10:19 pilot_heartbeat.json
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd       893 Mar 14 10:19 pilotlog.txt
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 14 10:19 wrapper_checkpoint.txt
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd   1328191 Mar 14 10:19 log.48955015._023787.job.log.1
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd       357 Mar 14 10:19 output.list
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 14 10:19 runtime_log
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd   1679360 Mar 14 10:19 result.tar.gz
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar 14 10:19 runtime_log.err
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd       650 Mar 14 10:19 jG2KDm1iVL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmc9rLDmXOeJTm.diag
[2026-03-14 10:19:58] -rw-rw-r-- 1 whitlerd whitlerd     21605 Mar 14 10:19 stderr.txt
[2026-03-14 10:19:58] HITS file was successfully produced:
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd 185053887 Mar 14 10:18 shared/HITS.pool.root.1
[2026-03-14 10:19:58]  *** Contents of shared directory: ***
[2026-03-14 10:19:58] total 613840
[2026-03-14 10:19:58] -rw-r--r-- 2 whitlerd whitlerd 441210919 Mar 14 07:43 ATLAS.root_0
[2026-03-14 10:19:58] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 07:43 start_atlas.sh
[2026-03-14 10:19:58] -rw-r--r-- 2 whitlerd whitlerd    597536 Mar 14 07:43 input.tar.gz
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd 185053887 Mar 14 10:18 HITS.pool.root.1
[2026-03-14 10:19:58] -rw------- 1 whitlerd whitlerd   1679360 Mar 14 10:19 result.tar.gz
10:20:00 (2125749): run_atlas exited; CPU time 36713.401932
10:20:00 (2125749): called boinc_finish(0)

</stderr_txt>
]]>

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