Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
09:03:58 (2840303): wrapper (7.7.26015): starting
09:03:58 (2840303): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 09:03:58] Arguments: --nthreads 4
[2026-03-14 09:03:58] Threads: 4
[2026-03-14 09:03:58] Checking for CVMFS
[2026-03-14 09:03:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 09:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 09:03:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 09:03:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 09:03:59] 2.13.3.0 1760492 11709 50860 157278 1 50 2213275 4096001 1832 130560 0 9553250 99.991 420296 605 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-14 09:03:59] CVMFS is ok
[2026-03-14 09:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 09:03:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-14 09:03:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-14 09:03:59] Further information can be found at the LHC@home message board.
[2026-03-14 09:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 09:03:59] Checking for apptainer binary...
[2026-03-14 09:03:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 09:03:59] Running /usr/bin/apptainer --version
[2026-03-14 09:03:59] apptainer version 1.4.5
[2026-03-14 09:03:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 09:03:59] OptiPlex7070-Ubuntu
[2026-03-14 09:03:59] apptainer works
[2026-03-14 09:03:59] Set ATHENA_PROC_NUMBER=4
[2026-03-14 09:03:59] Set ATHENA_CORE_NUMBER=4
[2026-03-14 09:03:59] Starting ATLAS job with PandaID=7043027988
[2026-03-14 09:03:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 11:42:33]  *** The last 200 lines of the pilot log: ***
[2026-03-14 11:42:33] 2026-03-14 15:41:43,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 11:42:33] 2026-03-14 15:41:43,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 11:42:33] 2026-03-14 15:41:43,364 | INFO     | fitting pss+swap vs Time
[2026-03-14 11:42:33] 2026-03-14 15:41:43,364 | INFO     | sum of square deviations: 1154663510.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,365 | INFO     | sum of deviations: 3360519707.000001
[2026-03-14 11:42:33] 2026-03-14 15:41:43,365 | INFO     | mean x: 1773498167.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,365 | INFO     | mean y: 2321467.7032258064
[2026-03-14 11:42:33] 2026-03-14 15:41:43,365 | INFO     | intersect: -5159247672.497522
[2026-03-14 11:42:33] 2026-03-14 15:41:43,365 | INFO     | chi2: 1.4032556082453533
[2026-03-14 11:42:33] 2026-03-14 15:41:43,366 | INFO     | sum of square deviations: 1046484737.5
[2026-03-14 11:42:33] 2026-03-14 15:41:43,366 | INFO     | sum of deviations: 3215485862.999999
[2026-03-14 11:42:33] 2026-03-14 15:41:43,366 | INFO     | mean x: 1773498014.5
[2026-03-14 11:42:33] 2026-03-14 15:41:43,367 | INFO     | mean y: 2321263.2
[2026-03-14 11:42:33] 2026-03-14 15:41:43,367 | INFO     | intersect: -5447025095.454675
[2026-03-14 11:42:33] 2026-03-14 15:41:43,367 | INFO     | chi2: 1.4037863155200572
[2026-03-14 11:42:33] 2026-03-14 15:41:43,367 | INFO     | current chi2=1.4037863155200572 (change=-0.037819715209792513 %)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,367 | INFO     | right removable region: 149
[2026-03-14 11:42:33] 2026-03-14 15:41:43,367 | INFO     | sum of square deviations: 1046484737.5
[2026-03-14 11:42:33] 2026-03-14 15:41:43,368 | INFO     | sum of deviations: -10997345533.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,368 | INFO     | mean x: 1773498319.5
[2026-03-14 11:42:33] 2026-03-14 15:41:43,368 | INFO     | mean y: 2341180.7466666666
[2026-03-14 11:42:33] 2026-03-14 15:41:43,368 | INFO     | intersect: 18639759504.046707
[2026-03-14 11:42:33] 2026-03-14 15:41:43,368 | INFO     | chi2: 0.1676469458999633
[2026-03-14 11:42:33] 2026-03-14 15:41:43,369 | INFO     | current chi2=0.1676469458999633 (change=88.05300011523981 %)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,369 | INFO     | sum of square deviations: 945282840.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,369 | INFO     | sum of deviations: -3100610296.9999995
[2026-03-14 11:42:33] 2026-03-14 15:41:43,370 | INFO     | mean x: 1773498472.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,370 | INFO     | mean y: 2329269.6551724137
[2026-03-14 11:42:33] 2026-03-14 15:41:43,370 | INFO     | intersect: 5819559194.189681
[2026-03-14 11:42:33] 2026-03-14 15:41:43,370 | INFO     | chi2: 0.07992114051584537
[2026-03-14 11:42:33] 2026-03-14 15:41:43,370 | INFO     | current chi2=0.07992114051584537 (change=52.327708633872064 %)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,370 | INFO     | sum of square deviations: 850825255.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,371 | INFO     | sum of deviations: 1730028686.0000007
[2026-03-14 11:42:33] 2026-03-14 15:41:43,371 | INFO     | mean x: 1773498624.5
[2026-03-14 11:42:33] 2026-03-14 15:41:43,371 | INFO     | mean y: 2321588.4571428574
[2026-03-14 11:42:33] 2026-03-14 15:41:43,371 | INFO     | intersect: -3603828413.4801455
[2026-03-14 11:42:33] 2026-03-14 15:41:43,371 | INFO     | chi2: 0.0004511789352478496
[2026-03-14 11:42:33] 2026-03-14 15:41:43,372 | INFO     | current chi2=0.0004511789352478496 (change=99.43546984898396 %)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,372 | INFO     | sum of square deviations: 762879420.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,372 | INFO     | sum of deviations: 1403036660.9999998
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | mean x: 1773498777.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | mean y: 2322155.6740740743
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | intersect: -3259377841.908326
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | chi2: 0.00039905400598669246
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | current chi2=0.00039905400598669246 (change=11.5530502842565 %)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | left removable region: 40
[2026-03-14 11:42:33] 2026-03-14 15:41:43,373 | INFO     | sum of square deviations: 401533110.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,374 | INFO     | sum of deviations: 385287345.99999994
[2026-03-14 11:42:33] 2026-03-14 15:41:43,374 | INFO     | mean x: 1773499204.0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,374 | INFO     | mean y: 2323905.7064220184
[2026-03-14 11:42:33] 2026-03-14 15:41:43,374 | INFO     | intersect: -1699420693.7421079
[2026-03-14 11:42:33] 2026-03-14 15:41:43,374 | INFO     | chi2: 0.00020344886583630018
[2026-03-14 11:42:33] 2026-03-14 15:41:43,374 | INFO     | current memory leak: 0.96 B/s (using 109 data points, chi2=0.00)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | could have reported an average CPU frequency of 3406 MHz (9 samples)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | ..............................
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . Timing measurements:
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . get job = 0 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . initial setup = 5 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . payload setup = 3 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . stage-in = 0 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . payload execution = 9428 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,375 | INFO     | . stage-out = 0 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,376 | INFO     | . log creation = 0 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,376 | INFO     | ..............................
[2026-03-14 11:42:33] 2026-03-14 15:41:43,676 | INFO     | 
[2026-03-14 11:42:33] 2026-03-14 15:41:43,676 | INFO     | job summary report
[2026-03-14 11:42:33] 2026-03-14 15:41:43,676 | INFO     | --------------------------------------------------
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | PanDA job id: 7043027988
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | task id: 48966988
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | errors: (none)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | pilot state: finished 
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | transexitcode: 0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | exeerrorcode: 0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | exeerrordiag: 
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | exitcode: 0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | exitmsg: OK
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | cpuconsumptiontime: 36648 s
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | nevents: 400
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | neventsw: 0
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | pid: 2849001
[2026-03-14 11:42:33] 2026-03-14 15:41:43,677 | INFO     | pgrp: 2849001
[2026-03-14 11:42:33] 2026-03-14 15:41:43,678 | INFO     | corecount: 4
[2026-03-14 11:42:33] 2026-03-14 15:41:43,678 | INFO     | event service: False
[2026-03-14 11:42:33] 2026-03-14 15:41:43,678 | INFO     | sizes: {0: 2279848, 1: 2280309, 11: 2280309, 9432: 2308799, 9434: 2317825, 9437: 2317881, 9440: 2318295}
[2026-03-14 11:42:33] 2026-03-14 15:41:43,678 | INFO     | --------------------------------------------------
[2026-03-14 11:42:33] 2026-03-14 15:41:43,678 | INFO     | 
[2026-03-14 11:42:33] 2026-03-14 15:41:43,678 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-14 11:42:33] 2026-03-14 15:41:43,691 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,691 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,691 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,691 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,693 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 11:42:33] 2026-03-14 15:41:43,693 | INFO     | job 7043027988 has completed (purged errors)
[2026-03-14 11:42:33] 2026-03-14 15:41:43,693 | INFO     | overall cleanup function is called
[2026-03-14 11:42:33] 2026-03-14 15:41:44,700 | INFO     | --- collectZombieJob: --- 10, [2849001]
[2026-03-14 11:42:33] 2026-03-14 15:41:44,700 | INFO     | zombie collector waiting for pid 2849001
[2026-03-14 11:42:33] 2026-03-14 15:41:44,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 11:42:33] 2026-03-14 15:41:44,700 | INFO     | collected zombie processes
[2026-03-14 11:42:33] 2026-03-14 15:41:44,700 | INFO     | will attempt to kill all subprocesses of pid=2849001
[2026-03-14 11:42:33] 2026-03-14 15:41:44,836 | INFO     | process IDs to be killed: [2849001] (in reverse order)
[2026-03-14 11:42:33] 2026-03-14 15:41:44,877 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 11:42:33] 2026-03-14 15:41:44,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 11:42:33] 2026-03-14 15:41:44,880 | INFO     | did not find any defunct processes belonging to 2849001
[2026-03-14 11:42:33] 2026-03-14 15:41:44,883 | INFO     | did not find any defunct processes belonging to 2849001
[2026-03-14 11:42:33] 2026-03-14 15:41:44,883 | INFO     | ready for new job
[2026-03-14 11:42:33] 2026-03-14 15:41:44,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 11:42:33] 2026-03-14 15:41:44,885 | INFO     | **************************************
[2026-03-14 11:42:33] 2026-03-14 15:41:44,885 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 11:42:33] 2026-03-14 15:41:44,885 | INFO     | **************************************
[2026-03-14 11:42:33] 2026-03-14 15:41:44,885 | INFO     | 
[2026-03-14 11:42:33] 2026-03-14 15:41:44,886 | INFO     | architecture information:
[2026-03-14 11:42:33] 2026-03-14 15:41:44,886 | INFO     | executing command: cat /etc/os-release
[2026-03-14 11:42:33] 2026-03-14 15:41:44,897 | INFO     | cat /etc/os-release:
[2026-03-14 11:42:33] NAME="CentOS Linux"
[2026-03-14 11:42:33] VERSION="7 (Core)"
[2026-03-14 11:42:33] ID="centos"
[2026-03-14 11:42:33] ID_LIKE="rhel fedora"
[2026-03-14 11:42:33] VERSION_ID="7"
[2026-03-14 11:42:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 11:42:33] ANSI_COLOR="0;31"
[2026-03-14 11:42:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 11:42:33] HOME_URL="https://www.centos.org/"
[2026-03-14 11:42:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 11:42:33] 
[2026-03-14 11:42:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 11:42:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 11:42:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 11:42:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 11:42:33] 
[2026-03-14 11:42:33] 2026-03-14 15:41:44,898 | INFO     | **************************************
[2026-03-14 11:42:33] 2026-03-14 15:41:45,400 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-14 11:42:33] 2026-03-14 15:41:45,411 | INFO     | sufficient remaining disk space (411676180480 B)
[2026-03-14 11:42:33] 2026-03-14 15:41:45,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 11:42:33] 2026-03-14 15:41:45,412 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 11:42:33] 2026-03-14 15:41:45,412 | INFO     | update_server=False
[2026-03-14 11:42:33] 2026-03-14 15:41:45,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 11:42:33] 2026-03-14 15:41:45,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:42:33] 2026-03-14 15:41:45,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:42:33] 2026-03-14 15:41:45,661 | INFO     | aborting loop
[2026-03-14 11:42:33] 2026-03-14 15:41:45,669 | INFO     | all data control threads have been joined
[2026-03-14 11:42:33] 2026-03-14 15:41:46,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 11:42:33] 2026-03-14 15:41:46,413 | INFO     | [job] queue monitor thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:46,417 | INFO     | [job] retrieve thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:46,527 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:46,666 | INFO     | [job] job monitor thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:46,674 | INFO     | [data] control thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:46,710 | INFO     | all payload control threads have been joined
[2026-03-14 11:42:33] 2026-03-14 15:41:46,735 | INFO     | [data] copytool_in thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:46,738 | INFO     | all job control threads have been joined
[2026-03-14 11:42:33] 2026-03-14 15:41:46,990 | INFO     | [payload] validate_post thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:47,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 11:42:33] 2026-03-14 15:41:47,567 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:47,711 | INFO     | [payload] control thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:47,743 | INFO     | [job] control thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:47,789 | INFO     | [job] validate thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:47,855 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:47,926 | INFO     | [payload] failed_post thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:48,318 | INFO     | [data] copytool_out thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:51,288 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:41:55,927 | INFO     | job.realtimelogging is not enabled
[2026-03-14 11:42:33] 2026-03-14 15:41:56,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 11:42:33] 2026-03-14 15:42:16,033 | INFO     | PID=2844445 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 11:42:33] 2026-03-14 15:42:16,033 | INFO     | .. there are 3 such processes running
[2026-03-14 11:42:33] 2026-03-14 15:42:16,033 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 11:42:33] 2026-03-14 15:42:16,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 11:42:33] 2026-03-14 15:42:16,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 11:42:33] 2026-03-14 15:42:27,992 | INFO     | [monitor] cgroup control has ended
[2026-03-14 11:42:33] 2026-03-14 15:42:28,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740253439808)>', '<ExcThread(monitor, started 139739755693824)>']
[2026-03-14 11:42:33] 2026-03-14 15:42:29,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 11:42:33] 2026-03-14 15:42:29,098 | INFO     | [monitor] control thread has ended
[2026-03-14 11:42:33] 2026-03-14 15:42:33,738 | INFO     | all workflow threads have been joined
[2026-03-14 11:42:33] 2026-03-14 15:42:33,738 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 11:42:33] 2026-03-14 15:42:33,738 | INFO     | traces error code: 0
[2026-03-14 11:42:33] 2026-03-14 15:42:33,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 11:42:33] 2026-03-14 15:42:33,811 [wrapper] ==== pilot stdout END ====
[2026-03-14 11:42:33] 2026-03-14 15:42:33,813 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 11:42:33] 2026-03-14 15:42:33,814 [wrapper] pilotpid: 2844445
[2026-03-14 11:42:33] 2026-03-14 15:42:33,816 [wrapper] Pilot exit status: 0
[2026-03-14 11:42:33] 2026-03-14 15:42:33,822 [wrapper] pandaids: 7043027988
[2026-03-14 11:42:33] 2026-03-14 15:42:33,845 [wrapper] cleanup supervisor_pilot 2914835 2844446
[2026-03-14 11:42:33] 2026-03-14 15:42:33,847 [wrapper] Test setup, not cleaning
[2026-03-14 11:42:33] 2026-03-14 15:42:33,849 [wrapper] apfmon messages muted
[2026-03-14 11:42:33] 2026-03-14 15:42:33,850 [wrapper] ==== wrapper stdout END ====
[2026-03-14 11:42:33] 2026-03-14 15:42:33,852 [wrapper] ==== wrapper stderr END ====
[2026-03-14 11:42:33]  *** Error codes and diagnostics ***
[2026-03-14 11:42:33]     "exeErrorCode": 0,
[2026-03-14 11:42:33]     "exeErrorDiag": "",
[2026-03-14 11:42:33]     "pilotErrorCode": 0,
[2026-03-14 11:42:33]     "pilotErrorDiag": "",
[2026-03-14 11:42:33]  *** Listing of results directory ***
[2026-03-14 11:42:33] total 411284
[2026-03-14 11:42:33] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  6 03:28 pilot3.tar.gz
[2026-03-14 11:42:33] -rwx------ 1 whitlerd whitlerd     36322 Mar  6 03:51 runpilot2-wrapper.sh
[2026-03-14 11:42:33] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  6 03:52 queuedata.json
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 14 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 11:42:33] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 14 09:03 run_atlas
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 14 09:03 job.xml
[2026-03-14 11:42:33] -rw-r--r-- 2 whitlerd whitlerd 212936084 Mar 14 09:03 EVNT.48966985._000201.pool.root.1
[2026-03-14 11:42:33] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 09:03 start_atlas.sh
[2026-03-14 11:42:33] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 14 09:03 shared
[2026-03-14 11:42:33] -rw-r--r-- 2 whitlerd whitlerd    597961 Mar 14 09:03 input.tar.gz
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 14 09:03 init_data.xml
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 09:03 boinc_setup_complete
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 09:03 boinc_lockfile
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd      2590 Mar 14 09:03 pandaJob.out
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd   1004579 Mar 14 09:04 agis_schedconf.cvmfs.json
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd   1511579 Mar 14 09:04 agis_ddmendpoints.agis.ALL.json
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd       439 Mar 14 09:04 workernode_map.json
[2026-03-14 11:42:33] drwx------ 5 whitlerd whitlerd      4096 Mar 14 09:04 pilot3
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd 200853492 Mar 14 11:41 HITS.48966988._003732.pool.root.1
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar 14 11:41 boinc_task_state.xml
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd        95 Mar 14 11:41 pilot_heartbeat.json
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd      1032 Mar 14 11:41 memory_monitor_summary.json
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd    328965 Mar 14 11:41 log.48966988._003732.job.log.tgz.1
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd      6366 Mar 14 11:41 heartbeat.json
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 14 11:42 wrapper_checkpoint.txt
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 14 11:42 boinc_mmap_file
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd      4906 Mar 14 11:42 pilotlog.txt
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd   1383582 Mar 14 11:42 log.48966988._003732.job.log.1
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd       357 Mar 14 11:42 output.list
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 14 11:42 runtime_log
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd   1730560 Mar 14 11:42 result.tar.gz
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd       658 Mar 14 11:42 ZjyNDmd5fI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXGRLDmNooEBn.diag
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd      9054 Mar 14 11:42 runtime_log.err
[2026-03-14 11:42:33] -rw-rw-r-- 1 whitlerd whitlerd     21005 Mar 14 11:42 stderr.txt
[2026-03-14 11:42:33] HITS file was successfully produced:
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd 200853492 Mar 14 11:41 shared/HITS.pool.root.1
[2026-03-14 11:42:33]  *** Contents of shared directory: ***
[2026-03-14 11:42:33] total 406396
[2026-03-14 11:42:33] -rw-r--r-- 2 whitlerd whitlerd 212936084 Mar 14 09:03 ATLAS.root_0
[2026-03-14 11:42:33] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 09:03 start_atlas.sh
[2026-03-14 11:42:33] -rw-r--r-- 2 whitlerd whitlerd    597961 Mar 14 09:03 input.tar.gz
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd 200853492 Mar 14 11:41 HITS.pool.root.1
[2026-03-14 11:42:33] -rw------- 1 whitlerd whitlerd   1730560 Mar 14 11:42 result.tar.gz
11:42:35 (2840303): run_atlas exited; CPU time 36802.788242
11:42:35 (2840303): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN