Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:48:28 (17158): wrapper (7.7.26015): starting
19:48:28 (17158): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 19:48:28] Arguments: --nthreads 8
[2026-03-14 19:48:28] Threads: 8
[2026-03-14 19:48:28] Checking for CVMFS
[2026-03-14 19:48:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 19:48:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 19:48:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 19:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 19:48:33] 2.11.2.0 24514 127956 138916 157286 1 53 16409113 25165824 4751 130560 153 43854252 99.836 29785010 1061 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 19:48:33] CVMFS is ok
[2026-03-14 19:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 19:48:33] Checking for apptainer binary...
[2026-03-14 19:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 19:48:33] Running /usr/bin/apptainer --version
[2026-03-14 19:48:33] apptainer version 1.3.2-1.el7
[2026-03-14 19:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 19:48:37] cg-vwn473.simple-grid.lan
[2026-03-14 19:48:37] apptainer works
[2026-03-14 19:48:37] Set ATHENA_PROC_NUMBER=8
[2026-03-14 19:48:37] Set ATHENA_CORE_NUMBER=8
[2026-03-14 19:48:37] Starting ATLAS job with PandaID=7046197884
[2026-03-14 19:48:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 23:33:28]  *** The last 200 lines of the pilot log: ***
[2026-03-14 23:33:28] 2026-03-14 22:32:44,248 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7046197884/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,249 | INFO     | extracted standard info from prmon json
[2026-03-14 23:33:28] 2026-03-14 22:32:44,249 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 23:33:28] 2026-03-14 22:32:44,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 23:33:28] 2026-03-14 22:32:44,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 23:33:28] 2026-03-14 22:32:44,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 23:33:28] 2026-03-14 22:32:44,254 | INFO     | fitting pss+swap vs Time
[2026-03-14 23:33:28] 2026-03-14 22:32:44,255 | INFO     | sum of square deviations: 2912836010.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,256 | INFO     | sum of deviations: 89148773543.99998
[2026-03-14 23:33:28] 2026-03-14 22:32:44,256 | INFO     | mean x: 1773521099.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,257 | INFO     | mean y: 2416505.028436019
[2026-03-14 23:33:28] 2026-03-14 22:32:44,257 | INFO     | intersect: -54277065857.679985
[2026-03-14 23:33:28] 2026-03-14 22:32:44,257 | INFO     | chi2: 5.50187595923373
[2026-03-14 23:33:28] 2026-03-14 22:32:44,258 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 23:33:28] 2026-03-14 22:32:44,259 | INFO     | sum of deviations: 100730579871.50002
[2026-03-14 23:33:28] 2026-03-14 22:32:44,259 | INFO     | mean x: 1773520946.5
[2026-03-14 23:33:28] 2026-03-14 22:32:44,259 | INFO     | mean y: 2425036.9077669904
[2026-03-14 23:33:28] 2026-03-14 22:32:44,259 | INFO     | intersect: -65904007664.19644
[2026-03-14 23:33:28] 2026-03-14 22:32:44,260 | INFO     | chi2: 4.760685588034979
[2026-03-14 23:33:28] 2026-03-14 22:32:44,260 | INFO     | current chi2=4.760685588034979 (change=13.471593628984307 %)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,260 | INFO     | right removable region: 205
[2026-03-14 23:33:28] 2026-03-14 22:32:44,260 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 23:33:28] 2026-03-14 22:32:44,262 | INFO     | sum of deviations: 21580622456.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,262 | INFO     | mean x: 1773521251.5
[2026-03-14 23:33:28] 2026-03-14 22:32:44,262 | INFO     | mean y: 2467392.718446602
[2026-03-14 23:33:28] 2026-03-14 22:32:44,262 | INFO     | intersect: -14117396584.616434
[2026-03-14 23:33:28] 2026-03-14 22:32:44,263 | INFO     | chi2: 1.4147692302452695
[2026-03-14 23:33:28] 2026-03-14 22:32:44,263 | INFO     | current chi2=1.4147692302452695 (change=74.28569381192828 %)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,267 | INFO     | sum of square deviations: 2518000700.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,269 | INFO     | sum of deviations: -1540164173.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,269 | INFO     | mean x: 1773521404.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,269 | INFO     | mean y: 2485562.114427861
[2026-03-14 23:33:28] 2026-03-14 22:32:44,269 | INFO     | intersect: 1087280386.2339997
[2026-03-14 23:33:28] 2026-03-14 22:32:44,270 | INFO     | chi2: 0.8249535847752857
[2026-03-14 23:33:28] 2026-03-14 22:32:44,270 | INFO     | current chi2=0.8249535847752857 (change=41.68988361216559 %)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,270 | INFO     | sum of square deviations: 2334722845.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,272 | INFO     | sum of deviations: -5080712173.500001
[2026-03-14 23:33:28] 2026-03-14 22:32:44,272 | INFO     | mean x: 1773521556.5
[2026-03-14 23:33:28] 2026-03-14 22:32:44,272 | INFO     | mean y: 2488462.2602040814
[2026-03-14 23:33:28] 2026-03-14 22:32:44,272 | INFO     | intersect: 3861941236.8674703
[2026-03-14 23:33:28] 2026-03-14 22:32:44,273 | INFO     | chi2: 0.7995432065352887
[2026-03-14 23:33:28] 2026-03-14 22:32:44,273 | INFO     | current chi2=0.7995432065352887 (change=3.0802191431071515 %)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,273 | INFO     | left removable region: 30
[2026-03-14 23:33:28] 2026-03-14 22:32:44,273 | INFO     | sum of square deviations: 1661798600.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,274 | INFO     | sum of deviations: 4457257373.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,275 | INFO     | mean x: 1773521831.0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,275 | INFO     | mean y: 2502779.5714285714
[2026-03-14 23:33:28] 2026-03-14 22:32:44,275 | INFO     | intersect: -4754417377.540998
[2026-03-14 23:33:28] 2026-03-14 22:32:44,275 | INFO     | chi2: 0.0007964359506300965
[2026-03-14 23:33:28] 2026-03-14 22:32:44,275 | INFO     | current memory leak: 2.68 B/s (using 175 data points, chi2=0.00)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,276 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,276 | INFO     | ..............................
[2026-03-14 23:33:28] 2026-03-14 22:32:44,276 | INFO     | . Timing measurements:
[2026-03-14 23:33:28] 2026-03-14 22:32:44,276 | INFO     | . get job = 0 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,276 | INFO     | . initial setup = 97 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,276 | INFO     | . payload setup = 125 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,277 | INFO     | . stage-in = 0 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,277 | INFO     | . payload execution = 12978 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,277 | INFO     | . stage-out = 3 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,277 | INFO     | . log creation = 1 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,277 | INFO     | ..............................
[2026-03-14 23:33:28] 2026-03-14 22:32:44,808 | INFO     | 
[2026-03-14 23:33:28] 2026-03-14 22:32:44,808 | INFO     | job summary report
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | --------------------------------------------------
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | PanDA job id: 7046197884
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | task id: 48955015
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | errors: (none)
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | pilot state: finished 
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | transexitcode: 0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | exeerrorcode: 0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | exeerrordiag: 
[2026-03-14 23:33:28] 2026-03-14 22:32:44,809 | INFO     | exitcode: 0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | exitmsg: OK
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | cpuconsumptiontime: 49884 s
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | nevents: 400
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | neventsw: 0
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | pid: 25795
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | pgrp: 25795
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | corecount: 8
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | event service: False
[2026-03-14 23:33:28] 2026-03-14 22:32:44,810 | INFO     | sizes: {0: 2279146, 1: 2279832, 2: 2280293, 13: 2280293, 13108: 2310430, 13111: 2319430, 13113: 2319614, 13116: 2319808}
[2026-03-14 23:33:28] 2026-03-14 22:32:44,811 | INFO     | --------------------------------------------------
[2026-03-14 23:33:28] 2026-03-14 22:32:44,811 | INFO     | 
[2026-03-14 23:33:28] 2026-03-14 22:32:44,811 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-03-14 23:33:28] 2026-03-14 22:32:44,949 | INFO     | time since job start (13129s) is within the limit (345600.0s)
[2026-03-14 23:33:28] 2026-03-14 22:32:45,344 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,344 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,344 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,344 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 23:33:28] 2026-03-14 22:32:45,346 | INFO     | job 7046197884 has completed (purged errors)
[2026-03-14 23:33:28] 2026-03-14 22:32:45,347 | INFO     | overall cleanup function is called
[2026-03-14 23:33:28] 2026-03-14 22:32:46,355 | INFO     | --- collectZombieJob: --- 10, [25795]
[2026-03-14 23:33:28] 2026-03-14 22:32:46,355 | INFO     | zombie collector waiting for pid 25795
[2026-03-14 23:33:28] 2026-03-14 22:32:46,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 23:33:28] 2026-03-14 22:32:46,356 | INFO     | collected zombie processes
[2026-03-14 23:33:28] 2026-03-14 22:32:46,356 | INFO     | will attempt to kill all subprocesses of pid=25795
[2026-03-14 23:33:28] 2026-03-14 22:32:46,508 | INFO     | process IDs to be killed: [25795] (in reverse order)
[2026-03-14 23:33:28] 2026-03-14 22:32:47,144 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 23:33:28] 2026-03-14 22:32:47,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 23:33:28] 2026-03-14 22:32:47,147 | INFO     | did not find any defunct processes belonging to 25795
[2026-03-14 23:33:28] 2026-03-14 22:32:47,150 | INFO     | did not find any defunct processes belonging to 25795
[2026-03-14 23:33:28] 2026-03-14 22:32:47,151 | INFO     | ready for new job
[2026-03-14 23:33:28] 2026-03-14 22:32:47,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 23:33:28] 2026-03-14 22:32:47,153 | INFO     | **************************************
[2026-03-14 23:33:28] 2026-03-14 22:32:47,153 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 23:33:28] 2026-03-14 22:32:47,153 | INFO     | **************************************
[2026-03-14 23:33:28] 2026-03-14 22:32:47,153 | INFO     | 
[2026-03-14 23:33:28] 2026-03-14 22:32:47,154 | INFO     | pilot is running in a VM
[2026-03-14 23:33:28] 2026-03-14 22:32:47,154 | INFO     | architecture information:
[2026-03-14 23:33:28] 2026-03-14 22:32:47,159 | INFO     | executing command: cat /etc/os-release
[2026-03-14 23:33:28] 2026-03-14 22:32:47,487 | INFO     | cat /etc/os-release:
[2026-03-14 23:33:28] NAME="CentOS Linux"
[2026-03-14 23:33:28] VERSION="7 (Core)"
[2026-03-14 23:33:28] ID="centos"
[2026-03-14 23:33:28] ID_LIKE="rhel fedora"
[2026-03-14 23:33:28] VERSION_ID="7"
[2026-03-14 23:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 23:33:28] ANSI_COLOR="0;31"
[2026-03-14 23:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 23:33:28] HOME_URL="https://www.centos.org/"
[2026-03-14 23:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 23:33:28] 
[2026-03-14 23:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 23:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 23:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 23:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 23:33:28] 
[2026-03-14 23:33:28] 2026-03-14 22:32:47,487 | INFO     | **************************************
[2026-03-14 23:33:28] 2026-03-14 22:32:47,990 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-03-14 23:33:28] 2026-03-14 22:32:48,195 | INFO     | sufficient remaining disk space (495105081344 B)
[2026-03-14 23:33:28] 2026-03-14 22:32:48,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 23:33:28] 2026-03-14 22:32:48,196 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 23:33:28] 2026-03-14 22:32:48,196 | INFO     | update_server=False
[2026-03-14 23:33:28] 2026-03-14 22:32:48,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 23:33:28] 2026-03-14 22:32:48,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 23:33:28] 2026-03-14 22:32:48,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 23:33:28] 2026-03-14 22:32:48,239 | INFO     | all payload control threads have been joined
[2026-03-14 23:33:28] 2026-03-14 22:32:48,673 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 23:33:28] 2026-03-14 22:32:48,673 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 23:33:28] 2026-03-14 22:32:48,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:33:28] 2026-03-14 22:32:48,674 | INFO     | will abort loop
[2026-03-14 23:33:28] 2026-03-14 22:32:48,694 | INFO     | all data control threads have been joined
[2026-03-14 23:33:28] 2026-03-14 22:32:49,111 | INFO     | all job control threads have been joined
[2026-03-14 23:33:28] 2026-03-14 22:32:49,201 | INFO     | [job] retrieve thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,245 | INFO     | [payload] control thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,338 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,370 | INFO     | [payload] failed_post thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:33:28] 2026-03-14 22:32:49,665 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,678 | INFO     | [job] job monitor thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,700 | INFO     | [data] control thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:49,920 | INFO     | [payload] validate_post thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,029 | INFO     | [data] copytool_in thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,117 | INFO     | [job] control thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,131 | INFO     | [job] validate thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,203 | INFO     | [data] copytool_out thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,317 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,430 | INFO     | [job] queue monitor thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:50,485 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:32:52,205 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 23:33:28] 2026-03-14 22:33:17,447 | INFO     | [monitor] cgroup control has ended
[2026-03-14 23:33:28] 2026-03-14 22:33:18,116 | INFO     | PID=21275 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 23:33:28] 2026-03-14 22:33:18,116 | INFO     | .. there are 9 such processes running
[2026-03-14 23:33:28] 2026-03-14 22:33:18,117 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 23:33:28] 2026-03-14 22:33:18,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 23:33:28] 2026-03-14 22:33:18,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 23:33:28] 2026-03-14 22:33:18,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178332673856)>', '<ExcThread(monitor, started 140178018506496)>']
[2026-03-14 23:33:28] 2026-03-14 22:33:19,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 23:33:28] 2026-03-14 22:33:19,122 | INFO     | [monitor] control thread has ended
[2026-03-14 23:33:28] 2026-03-14 22:33:23,608 | INFO     | all workflow threads have been joined
[2026-03-14 23:33:28] 2026-03-14 22:33:23,608 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 23:33:28] 2026-03-14 22:33:23,609 | INFO     | traces error code: 0
[2026-03-14 23:33:28] 2026-03-14 22:33:23,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 23:33:28] 2026-03-14 22:33:23,880 [wrapper] ==== pilot stdout END ====
[2026-03-14 23:33:28] 2026-03-14 22:33:23,903 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 23:33:28] 2026-03-14 22:33:23,970 [wrapper] pilotpid: 21275
[2026-03-14 23:33:28] 2026-03-14 22:33:24,035 [wrapper] Pilot exit status: 0
[2026-03-14 23:33:28] 2026-03-14 22:33:24,402 [wrapper] pandaids: 7046197884
[2026-03-14 23:33:28] 2026-03-14 22:33:25,401 [wrapper] cleanup supervisor_pilot   740 21276
[2026-03-14 23:33:28] 2026-03-14 22:33:25,509 [wrapper] Test setup, not cleaning
[2026-03-14 23:33:28] 2026-03-14 22:33:25,583 [wrapper] apfmon messages muted
[2026-03-14 23:33:28] 2026-03-14 22:33:25,691 [wrapper] ==== wrapper stdout END ====
[2026-03-14 23:33:28] 2026-03-14 22:33:25,790 [wrapper] ==== wrapper stderr END ====
[2026-03-14 23:33:28]  *** Error codes and diagnostics ***
[2026-03-14 23:33:28]     "exeErrorCode": 0,
[2026-03-14 23:33:28]     "exeErrorDiag": "",
[2026-03-14 23:33:28]     "pilotErrorCode": 0,
[2026-03-14 23:33:28]     "pilotErrorDiag": "",
[2026-03-14 23:33:28]  *** Listing of results directory ***
[2026-03-14 23:33:28] total 617884
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc    585013 Mar 14 05:19 pilot3.tar.gz
[2026-03-14 23:33:28] -rwx------. 1 boinc boinc     36322 Mar 14 05:24 runpilot2-wrapper.sh
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc      5111 Mar 14 05:27 queuedata.json
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc       100 Mar 14 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 23:33:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 19:48 run_atlas
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc       105 Mar 14 19:48 job.xml
[2026-03-14 23:33:28] -rw-r--r--. 2 boinc boinc 440301829 Mar 14 19:48 EVNT.46701403._002534.pool.root.1
[2026-03-14 23:33:28] -rw-r--r--. 2 boinc boinc     15845 Mar 14 19:48 start_atlas.sh
[2026-03-14 23:33:28] drwxrwx--x. 2 boinc boinc        68 Mar 14 19:48 shared
[2026-03-14 23:33:28] -rw-r--r--. 2 boinc boinc    597537 Mar 14 19:48 input.tar.gz
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc      6392 Mar 14 19:48 init_data.xml
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc         0 Mar 14 19:48 boinc_lockfile
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc      2571 Mar 14 19:48 pandaJob.out
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc       415 Mar 14 19:53 workernode_map.json
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc   1005889 Mar 14 19:53 agis_schedconf.cvmfs.json
[2026-03-14 23:33:28] drwx------. 5 boinc boinc      4096 Mar 14 19:53 pilot3
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc 183881241 Mar 14 23:31 HITS.48955015._023845.pool.root.1
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc       532 Mar 14 23:31 boinc_task_state.xml
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc      1012 Mar 14 23:32 memory_monitor_summary.json
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc   1511579 Mar 14 23:32 agis_ddmendpoints.agis.ALL.json
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc    452102 Mar 14 23:32 log.48955015._023845.job.log.tgz.1
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc      6319 Mar 14 23:32 heartbeat.json
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc        28 Mar 14 23:33 wrapper_checkpoint.txt
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc      8192 Mar 14 23:33 boinc_mmap_file
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc        95 Mar 14 23:33 pilot_heartbeat.json
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc      5067 Mar 14 23:33 pilotlog.txt
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc   1850584 Mar 14 23:33 log.48955015._023845.job.log.1
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc       357 Mar 14 23:33 output.list
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc       620 Mar 14 23:33 runtime_log
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc   2324480 Mar 14 23:33 result.tar.gz
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc      8832 Mar 14 23:33 runtime_log.err
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc       655 Mar 14 23:33 L7cLDm1iVL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm49rLDmN4z86n.diag
[2026-03-14 23:33:28] -rw-r--r--. 1 boinc boinc     20743 Mar 14 23:33 stderr.txt
[2026-03-14 23:33:28] HITS file was successfully produced:
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc 183881241 Mar 14 23:31 shared/HITS.pool.root.1
[2026-03-14 23:33:28]  *** Contents of shared directory: ***
[2026-03-14 23:33:28] total 612428
[2026-03-14 23:33:28] -rw-r--r--. 2 boinc boinc 440301829 Mar 14 19:48 ATLAS.root_0
[2026-03-14 23:33:28] -rw-r--r--. 2 boinc boinc     15845 Mar 14 19:48 start_atlas.sh
[2026-03-14 23:33:28] -rw-r--r--. 2 boinc boinc    597537 Mar 14 19:48 input.tar.gz
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc 183881241 Mar 14 23:31 HITS.pool.root.1
[2026-03-14 23:33:28] -rw-------. 1 boinc boinc   2324480 Mar 14 23:33 result.tar.gz
23:33:29 (17158): run_atlas exited; CPU time 50072.808404
23:33:29 (17158): called boinc_finish(0)

</stderr_txt>
]]>

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