Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:21:16 (3883385): wrapper (7.7.26015): starting
07:21:16 (3883385): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 07:21:16] Arguments: --nthreads 4
[2026-03-15 07:21:16] Threads: 4
[2026-03-15 07:21:16] Checking for CVMFS
[2026-03-15 07:21:16] No cvmfs_config command found, will try listing directly
[2026-03-15 07:21:16] CVMFS is ok
[2026-03-15 07:21:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 07:21:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 07:21:16] Further information can be found at the LHC@home message board.
[2026-03-15 07:21:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 07:21:16] Checking for apptainer binary...
[2026-03-15 07:21:16] which: no apptainer in ((null))
[2026-03-15 07:21:16] apptainer is not installed, using version from CVMFS
[2026-03-15 07:21:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 07:21:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot152/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-15 07:21:16] apptainer works
[2026-03-15 07:21:16] Set ATHENA_PROC_NUMBER=4
[2026-03-15 07:21:16] Set ATHENA_CORE_NUMBER=4
[2026-03-15 07:21:16] Starting ATLAS job with PandaID=7045950673
[2026-03-15 07:21:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot152/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 08:39:41]  *** The last 200 lines of the pilot log: ***
[2026-03-15 08:39:41]  is_altstaged=None
[2026-03-15 08:39:41]  is_tar=False
[2026-03-15 08:39:41]  lfn=log.48955010._038561.job.log.tgz.1
[2026-03-15 08:39:41]  mtime=0
[2026-03-15 08:39:41]  protocol_id=None
[2026-03-15 08:39:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 08:39:41]  replicas=None
[2026-03-15 08:39:41]  scope=mc23_13p6TeV
[2026-03-15 08:39:41]  status=None
[2026-03-15 08:39:41]  status_code=0
[2026-03-15 08:39:41]  storage_token=
[2026-03-15 08:39:41]  surl=/var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7045950673/log.48955010._038561.job.log.tgz.1
[2026-03-15 08:39:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/16/log.48955010._038561.job.log.tgz.1
[2026-03-15 08:39:41]  workdir=None
[2026-03-15 08:39:41] ]
[2026-03-15 08:39:41] 2026-03-15 07:38:55,878 | INFO     | transferring file log.48955010._038561.job.log.tgz.1 from /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7045950673/log.48955010._038561.job.log.tgz.1 to /var/lib/
[2026-03-15 08:39:41] 2026-03-15 07:38:55,878 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7045950673/log.48955010._038561.job.log.tgz.1 /var/lib/boinc/var/slot152/slots/0/
[2026-03-15 08:39:41] 2026-03-15 07:38:55,895 | INFO     | adding to output.list: log.48955010._038561.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/16/log.48955010._038561.job.log.tg
[2026-03-15 08:39:41] 2026-03-15 07:38:55,896 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 08:39:41] 2026-03-15 07:38:55,896 | INFO     | summary of transferred files:
[2026-03-15 08:39:41] 2026-03-15 07:38:55,896 | INFO     |  -- lfn=log.48955010._038561.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 08:39:41] 2026-03-15 07:38:55,896 | INFO     | stage-out finished correctly
[2026-03-15 08:39:41] 2026-03-15 07:38:56,025 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 08:39:41] 2026-03-15 07:38:56,076 | INFO     | job 7045950673 has state=finished
[2026-03-15 08:39:41] 2026-03-15 07:38:56,076 | INFO     | preparing for final server update for job 7045950673 in state='finished'
[2026-03-15 08:39:41] 2026-03-15 07:38:56,615 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,615 | INFO     | reading metadata from: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7045950673/jobReport.json
[2026-03-15 08:39:41] 2026-03-15 07:38:56,616 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot152/slots/0/workernode_map.json
[2026-03-15 08:39:41] 2026-03-15 07:38:56,617 | INFO     | this job has now completed (state=finished)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,617 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,617 | INFO     | log transfer has been attempted: DONE
[2026-03-15 08:39:41] 2026-03-15 07:38:56,617 | INFO     | job 7045950673 has finished - writing final server update
[2026-03-15 08:39:41] 2026-03-15 07:38:56,617 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2491785/.job.ad'
[2026-03-15 08:39:41] 2026-03-15 07:38:56,617 | INFO     | total number of processed events: 400 (read)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,635 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7045950673/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,635 | INFO     | extracted standard info from prmon json
[2026-03-15 08:39:41] 2026-03-15 07:38:56,635 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 08:39:41] 2026-03-15 07:38:56,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 08:39:41] 2026-03-15 07:38:56,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 08:39:41] 2026-03-15 07:38:56,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | fitting pss+swap vs Time
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | sum of square deviations: 101843770.0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | sum of deviations: -1982983120.0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | mean x: 1773558088.0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | mean y: 2349255.2608695654
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | intersect: 34535004034.66932
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | chi2: 0.0024563322459207806
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | current memory leak: -19.47 B/s (using 69 data points, chi2=0.00)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | could have reported an average CPU frequency of 3552 MHz (6 samples)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | ..............................
[2026-03-15 08:39:41] 2026-03-15 07:38:56,637 | INFO     | . Timing measurements:
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . get job = 0 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . initial setup = 5 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . payload setup = 5 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . stage-in = 0 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . payload execution = 4627 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . stage-out = 0 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | . log creation = 0 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,638 | INFO     | ..............................
[2026-03-15 08:39:41] 2026-03-15 07:38:56,686 | INFO     | 
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | job summary report
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | --------------------------------------------------
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | PanDA job id: 7045950673
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | task id: 48955010
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | errors: (none)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | pilot state: finished 
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | transexitcode: 0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | exeerrorcode: 0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | exeerrordiag: 
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | exitcode: 0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | exitmsg: OK
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | cpuconsumptiontime: 17771 s
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | nevents: 400
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | neventsw: 0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | pid: 3894562
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | pgrp: 3894562
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | corecount: 4
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | event service: False
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | sizes: {0: 2279091, 1: 2280221, 11: 2280221, 4636: 2306452, 4637: 2315668}
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | --------------------------------------------------
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | 
[2026-03-15 08:39:41] 2026-03-15 07:38:56,687 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot152/slots/0
[2026-03-15 08:39:41] 2026-03-15 07:38:56,703 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | job 7045950673 has completed (purged errors)
[2026-03-15 08:39:41] 2026-03-15 07:38:56,704 | INFO     | overall cleanup function is called
[2026-03-15 08:39:41] 2026-03-15 07:38:57,563 | WARNING  | process 3894562 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 08:39:41] 2026-03-15 07:38:57,707 | INFO     | --- collectZombieJob: --- 10, [3894562]
[2026-03-15 08:39:41] 2026-03-15 07:38:57,707 | INFO     | zombie collector waiting for pid 3894562
[2026-03-15 08:39:41] 2026-03-15 07:38:57,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 08:39:41] 2026-03-15 07:38:57,708 | INFO     | collected zombie processes
[2026-03-15 08:39:41] 2026-03-15 07:38:57,708 | INFO     | will attempt to kill all subprocesses of pid=3894562
[2026-03-15 08:39:41] 2026-03-15 07:38:58,444 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:39:41] 2026-03-15 07:38:59,425 | INFO     | process IDs to be killed: [3894562] (in reverse order)
[2026-03-15 08:39:41] 2026-03-15 07:38:59,469 | INFO     | number of running child processes to parent process 3894562: 1
[2026-03-15 08:39:41] 2026-03-15 07:38:59,469 | INFO     | maximum number of monitored processes: 6
[2026-03-15 08:39:41] 2026-03-15 07:38:59,469 | INFO     | aborting job monitoring since job object (job id=7045950673) has expired
[2026-03-15 08:39:41] 2026-03-15 07:38:59,658 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 08:39:41] 2026-03-15 07:38:59,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 08:39:41] 2026-03-15 07:38:59,690 | INFO     | did not find any defunct processes belonging to 3894562
[2026-03-15 08:39:41] 2026-03-15 07:38:59,721 | INFO     | did not find any defunct processes belonging to 3894562
[2026-03-15 08:39:41] 2026-03-15 07:38:59,721 | INFO     | ready for new job
[2026-03-15 08:39:41] 2026-03-15 07:38:59,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 08:39:41] 2026-03-15 07:38:59,723 | INFO     | **************************************
[2026-03-15 08:39:41] 2026-03-15 07:38:59,723 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 08:39:41] 2026-03-15 07:38:59,723 | INFO     | **************************************
[2026-03-15 08:39:41] 2026-03-15 07:38:59,723 | INFO     | 
[2026-03-15 08:39:41] 2026-03-15 07:38:59,729 | INFO     | architecture information:
[2026-03-15 08:39:41] 2026-03-15 07:38:59,729 | INFO     | executing command: cat /etc/os-release
[2026-03-15 08:39:41] 2026-03-15 07:38:59,745 | INFO     | cat /etc/os-release:
[2026-03-15 08:39:41] NAME="CentOS Linux"
[2026-03-15 08:39:41] VERSION="7 (Core)"
[2026-03-15 08:39:41] ID="centos"
[2026-03-15 08:39:41] ID_LIKE="rhel fedora"
[2026-03-15 08:39:41] VERSION_ID="7"
[2026-03-15 08:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 08:39:41] ANSI_COLOR="0;31"
[2026-03-15 08:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 08:39:41] HOME_URL="https://www.centos.org/"
[2026-03-15 08:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 08:39:41] 
[2026-03-15 08:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 08:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 08:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 08:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 08:39:41] 
[2026-03-15 08:39:41] 2026-03-15 07:38:59,746 | INFO     | **************************************
[2026-03-15 08:39:41] 2026-03-15 07:39:00,248 | INFO     | executing command: df -mP /var/lib/boinc/var/slot152/slots/0
[2026-03-15 08:39:41] 2026-03-15 07:39:00,266 | INFO     | sufficient remaining disk space (69253201920 B)
[2026-03-15 08:39:41] 2026-03-15 07:39:00,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 08:39:41] 2026-03-15 07:39:00,266 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 08:39:41] 2026-03-15 07:39:00,266 | INFO     | update_server=False
[2026-03-15 08:39:41] 2026-03-15 07:39:00,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 08:39:41] 2026-03-15 07:39:00,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:39:41] 2026-03-15 07:39:00,267 | INFO     | will abort loop
[2026-03-15 08:39:41] 2026-03-15 07:39:00,617 | INFO     | all job control threads have been joined
[2026-03-15 08:39:41] 2026-03-15 07:39:01,120 | INFO     | all data control threads have been joined
[2026-03-15 08:39:41] 2026-03-15 07:39:01,271 | INFO     | [job] retrieve thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:01,272 | INFO     | [job] job monitor thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:01,347 | INFO     | all payload control threads have been joined
[2026-03-15 08:39:41] 2026-03-15 07:39:01,435 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:01,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 08:39:41] 2026-03-15 07:39:01,488 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:01,581 | INFO     | [data] copytool_in thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:01,623 | INFO     | [job] control thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:01,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:39:41] 2026-03-15 07:39:01,929 | INFO     | [payload] failed_post thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:02,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 08:39:41] 2026-03-15 07:39:02,125 | INFO     | [data] control thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:02,321 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:02,352 | INFO     | [payload] control thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:02,702 | INFO     | [job] queue monitor thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:02,740 | INFO     | [job] validate thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:02,778 | INFO     | [payload] validate_post thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:03,460 | INFO     | [data] copytool_out thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:06,088 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:10,825 | INFO     | job.realtimelogging is not enabled
[2026-03-15 08:39:41] 2026-03-15 07:39:11,830 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 08:39:41] 2026-03-15 07:39:29,340 | INFO     | PID=3887978 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 08:39:41] 2026-03-15 07:39:29,340 | INFO     | .. there are 48 such processes running
[2026-03-15 08:39:41] 2026-03-15 07:39:29,341 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 08:39:41] 2026-03-15 07:39:29,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 08:39:41] 2026-03-15 07:39:29,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 08:39:41] 2026-03-15 07:39:35,903 | INFO     | [monitor] cgroup control has ended
[2026-03-15 08:39:41] 2026-03-15 07:39:36,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22613087315776)>', '<ExcThread(monitor, started 22612840544000)>']
[2026-03-15 08:39:41] 2026-03-15 07:39:36,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 08:39:41] 2026-03-15 07:39:36,376 | INFO     | [monitor] control thread has ended
[2026-03-15 08:39:41] 2026-03-15 07:39:41,203 | INFO     | all workflow threads have been joined
[2026-03-15 08:39:41] 2026-03-15 07:39:41,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 08:39:41] 2026-03-15 07:39:41,204 | INFO     | traces error code: 0
[2026-03-15 08:39:41] 2026-03-15 07:39:41,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 08:39:41] 2026-03-15 07:39:41,383 [wrapper] ==== pilot stdout END ====
[2026-03-15 08:39:41] 2026-03-15 07:39:41,389 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 08:39:41] 2026-03-15 07:39:41,391 [wrapper] pilotpid: 3887978
[2026-03-15 08:39:41] 2026-03-15 07:39:41,392 [wrapper] Pilot exit status: 0
[2026-03-15 08:39:41] 2026-03-15 07:39:41,399 [wrapper] pandaids: 7045950673
[2026-03-15 08:39:41] 2026-03-15 07:39:41,532 [wrapper] cleanup supervisor_pilot  480094 3887979
[2026-03-15 08:39:41] 2026-03-15 07:39:41,535 [wrapper] Test setup, not cleaning
[2026-03-15 08:39:41] 2026-03-15 07:39:41,536 [wrapper] apfmon messages muted
[2026-03-15 08:39:41] 2026-03-15 07:39:41,538 [wrapper] ==== wrapper stdout END ====
[2026-03-15 08:39:41] 2026-03-15 07:39:41,540 [wrapper] ==== wrapper stderr END ====
[2026-03-15 08:39:41]  *** Error codes and diagnostics ***
[2026-03-15 08:39:41]     "exeErrorCode": 0,
[2026-03-15 08:39:41]     "exeErrorDiag": "",
[2026-03-15 08:39:41]     "pilotErrorCode": 0,
[2026-03-15 08:39:41]     "pilotErrorDiag": "",
[2026-03-15 08:39:41]  *** Listing of results directory ***
[2026-03-15 08:39:41] total 613072
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc    585013 Mar 14 05:19 pilot3.tar.gz
[2026-03-15 08:39:41] -rwx------. 1 boinc boinc     36322 Mar 14 05:22 runpilot2-wrapper.sh
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc      5111 Mar 14 05:25 queuedata.json
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc       100 Mar 15 07:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 08:39:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 07:21 run_atlas
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc       105 Mar 15 07:21 job.xml
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc      6709 Mar 15 07:21 init_data.xml
[2026-03-15 08:39:41] -rw-r--r--. 2 boinc boinc 438363017 Mar 15 07:21 EVNT.46701403._001792.pool.root.1
[2026-03-15 08:39:41] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:21 start_atlas.sh
[2026-03-15 08:39:41] drwxrwx--x. 2 boinc boinc      4096 Mar 15 07:21 shared
[2026-03-15 08:39:41] -rw-r--r--. 2 boinc boinc    597531 Mar 15 07:21 input.tar.gz
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc         0 Mar 15 07:21 boinc_lockfile
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc      2564 Mar 15 07:21 pandaJob.out
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc   1006481 Mar 15 07:21 agis_schedconf.cvmfs.json
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc   1511579 Mar 15 07:21 agis_ddmendpoints.agis.ALL.json
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc       445 Mar 15 07:21 workernode_map.json
[2026-03-15 08:39:41] drwx------. 5 boinc boinc      4096 Mar 15 07:21 pilot3
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc 183547864 Mar 15 08:38 HITS.48955010._038561.pool.root.1
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc       530 Mar 15 08:38 boinc_task_state.xml
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc      1029 Mar 15 08:38 memory_monitor_summary.json
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc    284904 Mar 15 08:38 log.48955010._038561.job.log.tgz.1
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc      6359 Mar 15 08:38 heartbeat.json
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc      8192 Mar 15 08:39 boinc_mmap_file
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc        27 Mar 15 08:39 wrapper_checkpoint.txt
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc        95 Mar 15 08:39 pilot_heartbeat.json
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc      4905 Mar 15 08:39 pilotlog.txt
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc    684281 Mar 15 08:39 log.48955010._038561.job.log.1
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc       357 Mar 15 08:39 output.list
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc       620 Mar 15 08:39 runtime_log
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc    983040 Mar 15 08:39 result.tar.gz
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc      9221 Mar 15 08:39 runtime_log.err
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc       662 Mar 15 08:39 PYzMDmbhVL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm0RpLDmd7ZNxm.diag
[2026-03-15 08:39:41] -rw-r--r--. 1 boinc boinc     21344 Mar 15 08:39 stderr.txt
[2026-03-15 08:39:41] HITS file was successfully produced:
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc 183547864 Mar 15 08:38 shared/HITS.pool.root.1
[2026-03-15 08:39:41]  *** Contents of shared directory: ***
[2026-03-15 08:39:41] total 608908
[2026-03-15 08:39:41] -rw-r--r--. 2 boinc boinc 438363017 Mar 15 07:21 ATLAS.root_0
[2026-03-15 08:39:41] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:21 start_atlas.sh
[2026-03-15 08:39:41] -rw-r--r--. 2 boinc boinc    597531 Mar 15 07:21 input.tar.gz
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc 183547864 Mar 15 08:38 HITS.pool.root.1
[2026-03-15 08:39:41] -rw-------. 1 boinc boinc    983040 Mar 15 08:39 result.tar.gz
08:39:43 (3883385): run_atlas exited; CPU time 17985.750194
08:39:43 (3883385): called boinc_finish(0)

</stderr_txt>
]]>

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