Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:13 (353370): wrapper (7.7.26015): starting
21:39:13 (353370): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 21:39:13] Arguments: --nthreads 4
[2026-03-14 21:39:13] Threads: 4
[2026-03-14 21:39:13] Checking for CVMFS
[2026-03-14 21:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 21:39:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 21:39:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 21:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 21:39:14] 2.9.2.0 2981 1729 90368 157289 2 50 30610710 36864000 0 130560 0 981346 99.988 65510 6009 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 21:39:14] CVMFS is ok
[2026-03-14 21:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 21:39:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 21:39:14] Further information can be found at the LHC@home message board.
[2026-03-14 21:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 21:39:14] Checking for apptainer binary...
[2026-03-14 21:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 21:39:14] Running /usr/bin/apptainer --version
[2026-03-14 21:39:14] apptainer version 1.4.1-1.1
[2026-03-14 21:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 21:39:14] atlasA215b
[2026-03-14 21:39:14] apptainer works
[2026-03-14 21:39:14] Set ATHENA_PROC_NUMBER=4
[2026-03-14 21:39:14] Set ATHENA_CORE_NUMBER=4
[2026-03-14 21:39:14] Starting ATLAS job with PandaID=7045747046
[2026-03-14 21:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 22:49:42]  *** The last 200 lines of the pilot log: ***
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | job 7045747046 has completed (purged errors)
[2026-03-14 22:49:42] 2026-03-14 21:49:10,992 | INFO     | overall cleanup function is called
[2026-03-14 22:49:42] 2026-03-14 21:49:11,999 | INFO     | --- collectZombieJob: --- 10, [362001]
[2026-03-14 22:49:42] 2026-03-14 21:49:11,999 | INFO     | zombie collector waiting for pid 362001
[2026-03-14 22:49:42] 2026-03-14 21:49:11,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 22:49:42] 2026-03-14 21:49:11,999 | INFO     | collected zombie processes
[2026-03-14 22:49:42] 2026-03-14 21:49:11,999 | INFO     | will attempt to kill all subprocesses of pid=362001
[2026-03-14 22:49:42] 2026-03-14 21:49:12,040 | INFO     | process IDs to be killed: [362001] (in reverse order)
[2026-03-14 22:49:42] 2026-03-14 21:49:12,073 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 22:49:42] 2026-03-14 21:49:12,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 22:49:42] 2026-03-14 21:49:12,075 | INFO     | did not find any defunct processes belonging to 362001
[2026-03-14 22:49:42] 2026-03-14 21:49:12,076 | INFO     | did not find any defunct processes belonging to 362001
[2026-03-14 22:49:42] 2026-03-14 21:49:12,076 | INFO     | ready for new job
[2026-03-14 22:49:42] 2026-03-14 21:49:12,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 22:49:42] 2026-03-14 21:49:12,077 | INFO     | **************************************
[2026-03-14 22:49:42] 2026-03-14 21:49:12,077 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 22:49:42] 2026-03-14 21:49:12,077 | INFO     | **************************************
[2026-03-14 22:49:42] 2026-03-14 21:49:12,077 | INFO     | 
[2026-03-14 22:49:42] 2026-03-14 21:49:12,078 | INFO     | architecture information:
[2026-03-14 22:49:42] 2026-03-14 21:49:12,078 | INFO     | executing command: cat /etc/os-release
[2026-03-14 22:49:42] 2026-03-14 21:49:12,092 | INFO     | cat /etc/os-release:
[2026-03-14 22:49:42] NAME="CentOS Linux"
[2026-03-14 22:49:42] VERSION="7 (Core)"
[2026-03-14 22:49:42] ID="centos"
[2026-03-14 22:49:42] ID_LIKE="rhel fedora"
[2026-03-14 22:49:42] VERSION_ID="7"
[2026-03-14 22:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 22:49:42] ANSI_COLOR="0;31"
[2026-03-14 22:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 22:49:42] HOME_URL="https://www.centos.org/"
[2026-03-14 22:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 22:49:42] 
[2026-03-14 22:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 22:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 22:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 22:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 22:49:42] 
[2026-03-14 22:49:42] 2026-03-14 21:49:12,092 | INFO     | **************************************
[2026-03-14 22:49:42] 2026-03-14 21:49:12,596 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 22:49:42] 2026-03-14 21:49:12,613 | INFO     | sufficient remaining disk space (326955433984 B)
[2026-03-14 22:49:42] 2026-03-14 21:49:12,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 22:49:42] 2026-03-14 21:49:12,614 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 22:49:42] 2026-03-14 21:49:12,614 | INFO     | update_server=False
[2026-03-14 22:49:42] 2026-03-14 21:49:12,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 22:49:42] 2026-03-14 21:49:12,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 22:49:42] 2026-03-14 21:49:12,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 22:49:42] 2026-03-14 21:49:13,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 22:49:42] 2026-03-14 21:49:13,054 | INFO     | aborting loop
[2026-03-14 22:49:42] 2026-03-14 21:49:13,281 | INFO     | all job control threads have been joined
[2026-03-14 22:49:42] 2026-03-14 21:49:13,426 | INFO     | all data control threads have been joined
[2026-03-14 22:49:42] 2026-03-14 21:49:13,619 | INFO     | [job] retrieve thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:13,620 | INFO     | [job] queue monitor thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:13,784 | INFO     | all payload control threads have been joined
[2026-03-14 22:49:42] 2026-03-14 21:49:13,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 22:49:42] 2026-03-14 21:49:14,059 | INFO     | [job] job monitor thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,287 | INFO     | [job] control thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,308 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,432 | INFO     | [data] control thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,566 | INFO     | [job] validate thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,620 | INFO     | [data] copytool_out thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,689 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,790 | INFO     | [payload] control thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,851 | INFO     | [payload] validate_post thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:14,854 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:15,020 | INFO     | [data] copytool_in thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:15,190 | INFO     | [payload] failed_post thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:17,962 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:23,566 | INFO     | job.realtimelogging is not enabled
[2026-03-14 22:49:42] 2026-03-14 21:49:24,572 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 22:49:42] 2026-03-14 21:49:31,213 | INFO     | [monitor] cgroup control has ended
[2026-03-14 22:49:42] 2026-03-14 21:49:31,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032599545664)>', '<ExcThread(monitor, started 140031360493312)>']
[2026-03-14 22:49:42] 2026-03-14 21:49:36,362 | INFO     | all workflow threads have been joined
[2026-03-14 22:49:42] 2026-03-14 21:49:36,362 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 22:49:42] 2026-03-14 21:49:36,363 | INFO     | traces error code: 0
[2026-03-14 22:49:42] 2026-03-14 21:49:36,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 22:49:42] 2026-03-14 21:49:42,392 | INFO     | PID=357486 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 22:49:42] 2026-03-14 21:49:42,393 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 22:49:42] 2026-03-14 21:49:42,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 22:49:42] 2026-03-14 21:49:42,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 22:49:42] 2026-03-14 21:49:42,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 22:49:42] 2026-03-14 21:49:42,393 | INFO     | [monitor] control thread has ended
[2026-03-14 22:49:42] 2026-03-14 21:49:42,467 [wrapper] ==== pilot stdout END ====
[2026-03-14 22:49:42] 2026-03-14 21:49:42,471 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 22:49:42] 2026-03-14 21:49:42,475 [wrapper] pilotpid: 357486
[2026-03-14 22:49:42] 2026-03-14 21:49:42,480 [wrapper] Pilot exit status: 0
[2026-03-14 22:49:42] 2026-03-14 21:49:42,491 [wrapper] pandaids: 7045747046
[2026-03-14 22:49:42] 2026-03-14 21:49:42,512 [wrapper] cleanup supervisor_pilot  367173 357487
[2026-03-14 22:49:42] 2026-03-14 21:49:42,516 [wrapper] Test setup, not cleaning
[2026-03-14 22:49:42] 2026-03-14 21:49:42,520 [wrapper] apfmon messages muted
[2026-03-14 22:49:42] 2026-03-14 21:49:42,524 [wrapper] ==== wrapper stdout END ====
[2026-03-14 22:49:42] 2026-03-14 21:49:42,528 [wrapper] ==== wrapper stderr END ====
[2026-03-14 22:49:42]  *** Error codes and diagnostics ***
[2026-03-14 22:49:42]     "exeErrorCode": 0,
[2026-03-14 22:49:42]     "exeErrorDiag": "",
[2026-03-14 22:49:42]     "pilotErrorCode": 0,
[2026-03-14 22:49:42]     "pilotErrorDiag": "",
[2026-03-14 22:49:42]  *** Listing of results directory ***
[2026-03-14 22:49:42] total 621408
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc    585013 Mar 14 04:09 pilot3.tar.gz
[2026-03-14 22:49:42] -rwx------ 1 boinc boinc     36322 Mar 14 04:13 runpilot2-wrapper.sh
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc      5111 Mar 14 04:17 queuedata.json
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc       100 Mar 14 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 22:49:42] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 21:39 run_atlas
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc       105 Mar 14 21:39 job.xml
[2026-03-14 22:49:42] -rw-r--r-- 2 boinc boinc 442117806 Mar 14 21:39 EVNT.46701403._002527.pool.root.1
[2026-03-14 22:49:42] -rw-r--r-- 2 boinc boinc    597534 Mar 14 21:39 input.tar.gz
[2026-03-14 22:49:42] -rw-r--r-- 2 boinc boinc     15845 Mar 14 21:39 start_atlas.sh
[2026-03-14 22:49:42] drwxrwx--x 2 boinc boinc      4096 Mar 14 21:39 shared
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc         0 Mar 14 21:39 boinc_setup_complete
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc      6372 Mar 14 21:39 init_data.xml
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc         0 Mar 14 21:39 boinc_lockfile
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc      2572 Mar 14 21:39 pandaJob.out
[2026-03-14 22:49:42] -rw------- 1 boinc boinc   1006481 Mar 14 21:39 agis_schedconf.cvmfs.json
[2026-03-14 22:49:42] -rw------- 1 boinc boinc   1511579 Mar 14 21:39 agis_ddmendpoints.agis.ALL.json
[2026-03-14 22:49:42] -rw------- 1 boinc boinc       431 Mar 14 21:39 workernode_map.json
[2026-03-14 22:49:42] drwx------ 5 boinc boinc      4096 Mar 14 21:39 pilot3
[2026-03-14 22:49:42] -rw------- 1 boinc boinc        95 Mar 14 22:48 pilot_heartbeat.json
[2026-03-14 22:49:42] -rw------- 1 boinc boinc 188477975 Mar 14 22:48 HITS.48955015._023487.pool.root.1
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc       530 Mar 14 22:48 boinc_task_state.xml
[2026-03-14 22:49:42] -rw------- 1 boinc boinc      1022 Mar 14 22:49 memory_monitor_summary.json
[2026-03-14 22:49:42] -rw------- 1 boinc boinc    283743 Mar 14 22:49 log.48955015._023487.job.log.tgz.1
[2026-03-14 22:49:42] -rw------- 1 boinc boinc      6333 Mar 14 22:49 heartbeat.json
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc        27 Mar 14 22:49 wrapper_checkpoint.txt
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc      8192 Mar 14 22:49 boinc_mmap_file
[2026-03-14 22:49:42] -rw------- 1 boinc boinc       746 Mar 14 22:49 pilotlog.txt
[2026-03-14 22:49:42] -rw------- 1 boinc boinc    622016 Mar 14 22:49 log.48955015._023487.job.log.1
[2026-03-14 22:49:42] -rw------- 1 boinc boinc       357 Mar 14 22:49 output.list
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc       620 Mar 14 22:49 runtime_log
[2026-03-14 22:49:42] -rw------- 1 boinc boinc    921600 Mar 14 22:49 result.tar.gz
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc      8916 Mar 14 22:49 runtime_log.err
[2026-03-14 22:49:42] -rw------- 1 boinc boinc       661 Mar 14 22:49 cErNDmwcUL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm6FpLDmM7kCem.diag
[2026-03-14 22:49:42] -rw-r--r-- 1 boinc boinc     11395 Mar 14 22:49 stderr.txt
[2026-03-14 22:49:42] HITS file was successfully produced:
[2026-03-14 22:49:42] -rw------- 1 boinc boinc 188477975 Mar 14 22:48 shared/HITS.pool.root.1
[2026-03-14 22:49:42]  *** Contents of shared directory: ***
[2026-03-14 22:49:42] total 617324
[2026-03-14 22:49:42] -rw-r--r-- 2 boinc boinc 442117806 Mar 14 21:39 ATLAS.root_0
[2026-03-14 22:49:42] -rw-r--r-- 2 boinc boinc    597534 Mar 14 21:39 input.tar.gz
[2026-03-14 22:49:42] -rw-r--r-- 2 boinc boinc     15845 Mar 14 21:39 start_atlas.sh
[2026-03-14 22:49:42] -rw------- 1 boinc boinc 188477975 Mar 14 22:48 HITS.pool.root.1
[2026-03-14 22:49:42] -rw------- 1 boinc boinc    921600 Mar 14 22:49 result.tar.gz
22:49:44 (353370): run_atlas exited; CPU time 15337.636804
22:49:44 (353370): called boinc_finish(0)

</stderr_txt>
]]>

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